Personal tools

FFCP PHASE1:Hg19::chr12:96028776..96028781,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr12:96028776..96028781,-
|coexpression_cluster_id=C3346
|coexpression_cluster_id=C3346
|description=CAGE_peak_at_chr12:96028776..96028781,-
|description=CAGE_peak_at_chr12:96028776..96028781,-
|id=chr12:96028776..96028781,-
|id=chr12:96028776..96028781,-
|ontology_enrichment_celltype=CL:0002139!1.24e-66!24;CL:0000115!4.88e-57!35;CL:0002078!5.49e-50!44;CL:0000071!6.56e-42!18;CL:0002546!6.56e-42!18;CL:0000213!1.25e-33!57;CL:0000215!1.25e-33!57;CL:0005020!1.59e-27!6;CL:0002138!1.59e-27!6;CL:0005022!1.59e-27!6;CL:0002144!1.35e-20!3;CL:1000413!3.13e-18!9;CL:0000222!5.14e-18!119;CL:0000066!4.85e-15!254;CL:0000076!7.24e-13!62;CL:0000220!1.55e-10!246;CL:0002321!2.05e-10!248;CL:0002543!3.78e-10!6;CL:1000449!6.84e-10!16;CL:1000497!9.08e-09!18;CL:0002518!9.08e-09!18;CL:0002681!3.41e-08!13;CL:0002584!3.41e-08!13;CL:0000666!1.49e-07!4;CL:0002188!1.49e-07!4;CL:1001319!1.99e-07!1;CL:1000600!1.99e-07!1
|ontology_enrichment_celltype=CL:0002139!1.24e-66!24;CL:0000115!4.88e-57!35;CL:0002078!5.49e-50!44;CL:0000071!6.56e-42!18;CL:0002546!6.56e-42!18;CL:0000213!1.25e-33!57;CL:0000215!1.25e-33!57;CL:0005020!1.59e-27!6;CL:0002138!1.59e-27!6;CL:0005022!1.59e-27!6;CL:0002144!1.35e-20!3;CL:1000413!3.13e-18!9;CL:0000222!5.14e-18!119;CL:0000066!4.85e-15!254;CL:0000076!7.24e-13!62;CL:0000220!1.55e-10!246;CL:0002321!2.05e-10!248;CL:0002543!3.78e-10!6;CL:1000449!6.84e-10!16;CL:1000497!9.08e-09!18;CL:0002518!9.08e-09!18;CL:0002681!3.41e-08!13;CL:0002584!3.41e-08!13;CL:0000666!1.49e-07!4;CL:0002188!1.49e-07!4;CL:1001319!1.99e-07!1;CL:1000600!1.99e-07!1
|ontology_enrichment_celltype_v019=CL:0002139;5.49e-26;24!CL:0002078;2.87e-19;45!CL:0000115;6.91e-19;36!CL:0002138;1.57e-17;6!CL:0002544;2.19e-17;6!CL:0000213;1.12e-14;58!CL:0000215;1.12e-14;58!CL:0000071;4.45e-13;18!CL:1000413;6.16e-12;9!CL:0002144;1.10e-09;3
|ontology_enrichment_celltype_v019_2=CL:0002139,4.95e-26,24;CL:0000115,6.35e-25,36;CL:0002078,5.46e-20,45;CL:0005020,1.44e-17,6;CL:0002138,1.44e-17,6;CL:0005022,1.44e-17,6;CL:0002544,2.01e-17,6;CL:0000213,1.49e-15,58;CL:0000215,1.49e-15,58;CL:0000071,4.27e-13,18;CL:0002546,4.27e-13,18;CL:1000413,5.83e-12,9;CL:0002144,1.10e-09,3;CL:0000222,1.73e-07,121
|ontology_enrichment_development_v019=CL:0005022;1.57e-17;6!CL:0002546;4.45e-13;18
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001986!6.56e-42!18;UBERON:0004638!6.56e-42!18;UBERON:0004852!6.56e-42!18;UBERON:0000487!6.18e-34!22;UBERON:0006914!1.26e-29!25;UBERON:0000055!5.19e-27!69;UBERON:0002049!3.94e-23!79;UBERON:0007798!3.94e-23!79;UBERON:0001473!1.29e-20!8;UBERON:0004536!1.29e-20!8;UBERON:0006558!1.29e-20!8;UBERON:0001915!1.35e-20!3;UBERON:0001982!1.35e-20!3;UBERON:0003915!3.13e-18!9;UBERON:0004700!3.13e-18!9;UBERON:0001917!3.13e-18!9;UBERON:0002465!1.84e-16!10;UBERON:0001981!8.71e-16!60;UBERON:0007500!8.71e-16!60;UBERON:0004537!8.71e-16!60;UBERON:0006965!8.71e-16!60;UBERON:0004535!1.39e-15!110;UBERON:0001009!4.52e-15!113;UBERON:0003914!3.99e-14!118;UBERON:0004111!5.28e-12!241;UBERON:0004872!1.46e-10!84;UBERON:0004211!6.84e-10!16;UBERON:0001285!6.84e-10!16;UBERON:0007684!6.84e-10!16;UBERON:0003220!6.84e-10!16;UBERON:0004208!6.84e-10!16;UBERON:0000477!2.33e-09!286;UBERON:0006555!2.69e-09!17;UBERON:0005103!2.69e-09!17;UBERON:0000083!2.69e-09!17;UBERON:0009201!2.69e-09!17;UBERON:0004819!2.69e-09!17;UBERON:0006553!2.69e-09!17;UBERON:0003074!2.69e-09!17;UBERON:0003060!2.69e-09!17;UBERON:0000080!9.08e-09!18;UBERON:0002120!9.08e-09!18;UBERON:0004875!9.08e-09!18;UBERON:0005721!9.08e-09!18;UBERON:0005754!9.08e-09!18;UBERON:0007297!9.08e-09!18;UBERON:0001225!3.41e-08!13;UBERON:0008987!3.41e-08!13;UBERON:0004876!7.20e-08!20;UBERON:0003064!1.26e-07!37;UBERON:0003887!1.75e-07!21;UBERON:0004645!1.99e-07!1;UBERON:0001256!1.99e-07!1;UBERON:0001259!1.99e-07!1;UBERON:0000025!3.91e-07!194;UBERON:0001638!6.42e-07!9;UBERON:0003920!6.42e-07!9;UBERON:0004582!6.42e-07!9;UBERON:0001637!8.73e-07!42;UBERON:0003509!8.73e-07!42;UBERON:0004572!8.73e-07!42
|ontology_enrichment_uberon=UBERON:0001986!6.56e-42!18;UBERON:0004638!6.56e-42!18;UBERON:0004852!6.56e-42!18;UBERON:0000487!6.18e-34!22;UBERON:0006914!1.26e-29!25;UBERON:0000055!5.19e-27!69;UBERON:0002049!3.94e-23!79;UBERON:0007798!3.94e-23!79;UBERON:0001473!1.29e-20!8;UBERON:0004536!1.29e-20!8;UBERON:0006558!1.29e-20!8;UBERON:0001915!1.35e-20!3;UBERON:0001982!1.35e-20!3;UBERON:0003915!3.13e-18!9;UBERON:0004700!3.13e-18!9;UBERON:0001917!3.13e-18!9;UBERON:0002465!1.84e-16!10;UBERON:0001981!8.71e-16!60;UBERON:0007500!8.71e-16!60;UBERON:0004537!8.71e-16!60;UBERON:0006965!8.71e-16!60;UBERON:0004535!1.39e-15!110;UBERON:0001009!4.52e-15!113;UBERON:0003914!3.99e-14!118;UBERON:0004111!5.28e-12!241;UBERON:0004872!1.46e-10!84;UBERON:0004211!6.84e-10!16;UBERON:0001285!6.84e-10!16;UBERON:0007684!6.84e-10!16;UBERON:0003220!6.84e-10!16;UBERON:0004208!6.84e-10!16;UBERON:0000477!2.33e-09!286;UBERON:0006555!2.69e-09!17;UBERON:0005103!2.69e-09!17;UBERON:0000083!2.69e-09!17;UBERON:0009201!2.69e-09!17;UBERON:0004819!2.69e-09!17;UBERON:0006553!2.69e-09!17;UBERON:0003074!2.69e-09!17;UBERON:0003060!2.69e-09!17;UBERON:0000080!9.08e-09!18;UBERON:0002120!9.08e-09!18;UBERON:0004875!9.08e-09!18;UBERON:0005721!9.08e-09!18;UBERON:0005754!9.08e-09!18;UBERON:0007297!9.08e-09!18;UBERON:0001225!3.41e-08!13;UBERON:0008987!3.41e-08!13;UBERON:0004876!7.20e-08!20;UBERON:0003064!1.26e-07!37;UBERON:0003887!1.75e-07!21;UBERON:0004645!1.99e-07!1;UBERON:0001256!1.99e-07!1;UBERON:0001259!1.99e-07!1;UBERON:0000025!3.91e-07!194;UBERON:0001638!6.42e-07!9;UBERON:0003920!6.42e-07!9;UBERON:0004582!6.42e-07!9;UBERON:0001637!8.73e-07!42;UBERON:0003509!8.73e-07!42;UBERON:0004572!8.73e-07!42
|ontology_enrichment_uberon_v019=UBERON:0001473;2.07e-13;8!UBERON:0004536;2.07e-13;8!UBERON:0006558;2.07e-13;8!UBERON:0004638;4.45e-13;18!UBERON:0001986;4.45e-13;18!UBERON:0004852;4.45e-13;18!UBERON:0003915;6.16e-12;9!UBERON:0004700;6.16e-12;9!UBERON:0001917;6.16e-12;9!UBERON:0002465;6.28e-11;10!UBERON:0000487;7.93e-11;22!UBERON:0010523;1.10e-09;3!UBERON:0001915;1.10e-09;3!UBERON:0001982;1.10e-09;3!UBERON:0006914;1.31e-09;25!UBERON:0000490;1.02e-07;33!UBERON:0000055;4.13e-07;65
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.94e-13,8;UBERON:0004536,1.94e-13,8;UBERON:0006558,1.94e-13,8;UBERON:0004638,4.27e-13,18;UBERON:0001986,4.27e-13,18;UBERON:0004852,4.27e-13,18;UBERON:0003915,5.83e-12,9;UBERON:0004700,5.83e-12,9;UBERON:0001917,5.83e-12,9;UBERON:0002465,5.98e-11,10;UBERON:0000487,7.66e-11,22;UBERON:0010523,1.10e-09,3;UBERON:0001915,1.10e-09,3;UBERON:0001982,1.10e-09,3;UBERON:0006914,1.28e-09,25;UBERON:0000055,2.23e-09,68;UBERON:0002049,3.37e-08,78;UBERON:0007798,3.37e-08,78
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59009925893364,1.72046919021225,0,0,0.838998872419812,0.550236083880135,0.208994966536811,1.8089173141853,0.35576626268671,4.35136796594071,0.805658634218294,4.56163263431108,0.488124115096339,0,0,0.17859945656816,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,4.62681758070868,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,1.53135254993501,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59009925893364,1.72046919021225,0,0,0.838998872419812,0.550236083880135,0.208994966536811,1.8089173141853,0.35576626268671,4.35136796594071,0.805658634218294,4.56163263431108,0.488124115096339,0,0,0.17859945656816,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,4.62681758070868,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,1.53135254993501,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0
|short_description=p@chr12:96028776..96028781,-
|short_description=p@chr12:96028776..96028781,-
}}
}}

Latest revision as of 13:50, 24 July 2015

Short description:p@chr12:96028776..96028781, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr12:96028776..96028781, -
Coexpression cluster:C3346_Endothelial_Renal_somatostatinoma_Lymphatic_Small_Fibroblast_Natural
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data