FFCP PHASE1:Hg19::chr13:114630408..114630430,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114630408..114630430,+ | |||
|description=CAGE_peak_at_chr13:114630408..114630430,+ | |description=CAGE_peak_at_chr13:114630408..114630430,+ | ||
|id=chr13:114630408..114630430,+ | |id=chr13:114630408..114630430,+ | ||
|ontology_enrichment_celltype=CL:0000057!6.97e-20!75;CL:0000055!8.95e-19!180;CL:0002334!4.91e-12!12;CL:0000048!1.02e-11!430;CL:0000723!2.95e-11!436;CL:0002570!1.15e-10!8;CL:0000034!1.15e-10!444;CL:0002620!1.78e-09!23;CL:0000134!4.26e-08!358;CL:0000219!1.22e-07!390;CL:0002320!1.26e-07!365;CL:0002371!1.83e-07!591;CL:0000136!3.19e-07!15;CL:0002579!3.23e-07!3;CL:0002580!8.95e-07!3 | |ontology_enrichment_celltype=CL:0000057!6.97e-20!75;CL:0000055!8.95e-19!180;CL:0002334!4.91e-12!12;CL:0000048!1.02e-11!430;CL:0000723!2.95e-11!436;CL:0002570!1.15e-10!8;CL:0000034!1.15e-10!444;CL:0002620!1.78e-09!23;CL:0000134!4.26e-08!358;CL:0000219!1.22e-07!390;CL:0002320!1.26e-07!365;CL:0002371!1.83e-07!591;CL:0000136!3.19e-07!15;CL:0002579!3.23e-07!3;CL:0002580!8.95e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002195;2.99e-19;2!CL:0002571;2.99e-19;2!CL:0002615;2.97e-13;3!CL:0002579;2.97e-13;3!CL:0002574;2.62e-10;1!CL:0002599;2.62e-10;1!CL:0000136;6.04e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,3.77e-19,2;CL:0002571,3.77e-19,2;CL:0002579,3.79e-13,3;CL:0002615,4.56e-13,3;CL:0002599,1.43e-10,1;CL:0002574,2.74e-10,1;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;1.08e-10;1!DOID:17;2.49e-08;5!DOID:450;2.49e-08;5!DOID:66;2.49e-08;5!DOID:423;2.49e-08;5!DOID:0080000;2.49e-08;5!DOID:11722;2.49e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.30e-10,1;DOID:17,2.45e-08,5;DOID:450,2.45e-08,5;DOID:66,2.45e-08,5;DOID:423,2.45e-08,5;DOID:0080000,2.45e-08,5;DOID:11722,2.45e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001013!1.43e-09!14;UBERON:0002199!2.51e-09!45;UBERON:0002416!2.51e-09!45;UBERON:0003688!4.90e-09!6;UBERON:0002358!4.90e-09!6;UBERON:0003684!4.90e-09!6;UBERON:0001178!4.90e-09!6;UBERON:0003102!9.70e-09!95;UBERON:0002100!7.75e-08!216;UBERON:0002384!1.88e-07!375;UBERON:0000914!1.94e-07!83;UBERON:0002329!1.94e-07!83;UBERON:0003077!1.94e-07!83;UBERON:0003059!1.94e-07!83;UBERON:0007282!1.94e-07!83;UBERON:0009618!1.94e-07!83;UBERON:0007285!1.94e-07!83;UBERON:0004290!2.94e-07!70;UBERON:0002097!3.23e-07!40;UBERON:0000475!3.67e-07!365 | |ontology_enrichment_uberon=UBERON:0001013!1.43e-09!14;UBERON:0002199!2.51e-09!45;UBERON:0002416!2.51e-09!45;UBERON:0003688!4.90e-09!6;UBERON:0002358!4.90e-09!6;UBERON:0003684!4.90e-09!6;UBERON:0001178!4.90e-09!6;UBERON:0003102!9.70e-09!95;UBERON:0002100!7.75e-08!216;UBERON:0002384!1.88e-07!375;UBERON:0000914!1.94e-07!83;UBERON:0002329!1.94e-07!83;UBERON:0003077!1.94e-07!83;UBERON:0003059!1.94e-07!83;UBERON:0007282!1.94e-07!83;UBERON:0009618!1.94e-07!83;UBERON:0007285!1.94e-07!83;UBERON:0004290!2.94e-07!70;UBERON:0002097!3.23e-07!40;UBERON:0000475!3.67e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.37e-25;6!UBERON:0002358;9.37e-25;6!UBERON:0003684;9.37e-25;6!UBERON:0001178;9.37e-25;6!UBERON:0004457;1.34e-16;9!UBERON:0000042;1.34e-16;9!UBERON:0002107;5.60e-08;19!UBERON:0006925;5.60e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.84e-24,6;UBERON:0002358,1.84e-24,6;UBERON:0003684,1.84e-24,6;UBERON:0001178,1.84e-24,6;UBERON:0004457,2.31e-12,12;UBERON:0000042,2.31e-12,12;UBERON:0002417,9.58e-09,60;UBERON:0000916,9.58e-09,60;UBERON:0002107,5.87e-08,19;UBERON:0006925,5.87e-08,19;UBERON:0008836,5.87e-08,19;UBERON:0008835,6.88e-07,22;UBERON:0003894,6.88e-07,22 | |||
|phase1_expression=0.726713517082227,0.428201047781966,3.10099689011137,1.0007329835313,0,0.872338524100369,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0.485618833104395,0,1.02077085627447,0.491337269247072,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0,0.554128230968366,0,0.612975591598039,0,0,0,4.05759038755278,0.847727604638247,0,1.23663035086127,0.515281080091258,0.558350568994769,0,0.0974370051611986,0,2.30124746605748,0,0,0.503760491138201,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,1.690605505112,0.531876233169741,0,0,0,0,2.57360388584666,0,1.64648067356154,0.977208552881205,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0,1.21637060255316,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.744323423456331,0.61384789315225,0.841980283299221,3.20347873139252,1.02341449813341,0.965123526861645,0,0.771048469013278,0.355123450626254,0.246381468041427,0,0,0,0,0,0.918515585316854,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.322260734604821,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79128453917934,0,0,0,1.61885211824983,0.54907405947211,0.235624804691373,0,0,0,1.95053495635836,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,1.14241563650639,0.406870733204662,0,0,0.464033759878494,1.19428766609585,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22934412268644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0.726713517082227,0.428201047781966,3.10099689011137,1.0007329835313,0,0.872338524100369,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0.485618833104395,0,1.02077085627447,0.491337269247072,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0,0.554128230968366,0,0.612975591598039,0,0,0,4.05759038755278,0.847727604638247,0,1.23663035086127,0.515281080091258,0.558350568994769,0,0.0974370051611986,0,2.30124746605748,0,0,0.503760491138201,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,1.690605505112,0.531876233169741,0,0,0,0,2.57360388584666,0,1.64648067356154,0.977208552881205,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0,1.21637060255316,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.744323423456331,0.61384789315225,0.841980283299221,3.20347873139252,1.02341449813341,0.965123526861645,0,0.771048469013278,0.355123450626254,0.246381468041427,0,0,0,0,0,0.918515585316854,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.322260734604821,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79128453917934,0,0,0,1.61885211824983,0.54907405947211,0.235624804691373,0,0,0,1.95053495635836,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,1.14241563650639,0.406870733204662,0,0,0.464033759878494,1.19428766609585,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22934412268644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr13:114630408..114630430,+ | |short_description=p@chr13:114630408..114630430,+ | ||
}} | }} |
Latest revision as of 14:51, 24 July 2015
Short description: | p@chr13:114630408..114630430, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114630408..114630430, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 3.77e-19 | 2 |
hepatic mesenchymal stem cell | 3.77e-19 | 2 |
omentum preadipocyte | 3.79e-13 | 3 |
adipocyte of omentum tissue | 4.56e-13 | 3 |
smooth muscle cell of the esophagus | 1.43e-10 | 1 |
stromal cell of pancreas | 2.74e-10 | 1 |
multi fate stem cell | 4.21e-07 | 427 |
somatic stem cell | 5.89e-07 | 433 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.84e-24 | 6 |
peritoneum | 1.84e-24 | 6 |
abdominal cavity | 1.84e-24 | 6 |
visceral peritoneum | 1.84e-24 | 6 |
cavity lining | 2.31e-12 | 12 |
serous membrane | 2.31e-12 | 12 |
abdominal segment of trunk | 9.58e-09 | 60 |
abdomen | 9.58e-09 | 60 |
liver | 5.87e-08 | 19 |
digestive gland | 5.87e-08 | 19 |
liver bud | 5.87e-08 | 19 |
hepatic diverticulum | 6.88e-07 | 22 |
liver primordium | 6.88e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.30e-10 | 1 |
musculoskeletal system disease | 2.45e-08 | 5 |
myotonic disease | 2.45e-08 | 5 |
muscle tissue disease | 2.45e-08 | 5 |
myopathy | 2.45e-08 | 5 |
muscular disease | 2.45e-08 | 5 |
myotonic dystrophy | 2.45e-08 | 5 |