FFCP PHASE1:Hg19::chr13:23734149..23734161,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:23734149..23734161,+ | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr13:23734149..23734161,+ | |description=CAGE_peak_at_chr13:23734149..23734161,+ | ||
|id=chr13:23734149..23734161,+ | |id=chr13:23734149..23734161,+ | ||
|ontology_enrichment_celltype=CL:0000511;8.34e-34;1!CL:0002625;8.34e-34;1!CL:0000216;8.34e-34;1!CL:0000123;8.34e-18;2!CL:0000242;8.34e-18;2!CL:0000333;6.34e-08;5!CL:0000312;6.34e-08;5!CL:0000138;7.17e-07;6!CL:0000240;8.25e-07;6!CL:0000311;8.25e-07;6!CL:0000079;8.25e-07;6!CL:0000237;8.25e-07;6!CL:0000154;9.23e-07;6 | |ontology_enrichment_celltype=CL:0002536!6.14e-07!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000511;8.34e-34;1!CL:0002625;8.34e-34;1!CL:0000216;8.34e-34;1!CL:0000123;8.34e-18;2!CL:0000242;8.34e-18;2!CL:0000333;6.34e-08;5!CL:0000312;6.34e-08;5!CL:0000138;7.17e-07;6!CL:0000240;8.25e-07;6!CL:0000311;8.25e-07;6!CL:0000079;8.25e-07;6!CL:0000237;8.25e-07;6!CL:0000154;9.23e-07;6 | ||
|ontology_enrichment_disease=DOID:3371;1.84e-34;1!DOID:4549;1.84e-34;1!DOID:5861;1.84e-34;1!DOID:6496;1.84e-34;1!DOID:5093;1.22e-09;4!DOID:1612;1.22e-09;4!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6!DOID:169;8.25e-07;6 | |ontology_enrichment_celltype_v019_2=CL:0000511,9.85e-34,1;CL:0002625,9.85e-34,1;CL:0000216,9.85e-34,1;CL:0000242,9.07e-18,2;CL:0000312,6.55e-08,5;CL:0000058,7.17e-07,6;CL:0000138,7.17e-07,6;CL:0000240,8.48e-07,6;CL:0000311,8.48e-07,6;CL:0000079,8.48e-07,6;CL:0000237,8.48e-07,6;CL:0000036,8.48e-07,6;CL:0000357,8.48e-07,6;CL:0000114,8.48e-07,6;CL:0000154,9.49e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0001136;8.34e-34;1!UBERON:0001343;8.34e-34;1!UBERON:0004910;8.34e-34;1!UBERON:0004813;8.34e-34;1!UBERON:0004909;1.17e-17;2!UBERON:0002418;1.85e-12;3!UBERON:0004755;1.85e-12;3!UBERON:0001052;1.63e-09;4!UBERON:0005904;1.63e-09;4!UBERON:0000013;6.34e-08;5!UBERON:0002410;6.34e-08;5!UBERON:0004907;7.25e-08;5 | |ontology_enrichment_development_v019=CL:0000357;8.25e-07;6!CL:0000114;8.25e-07;6 | ||
|ontology_enrichment_disease=DOID:3095!4.13e-07!22;DOID:2994!4.13e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.84e-34;1!DOID:4549;1.84e-34;1!DOID:5861;1.84e-34;1!DOID:6496;1.84e-34;1!DOID:5093;1.22e-09;4!DOID:1612;1.22e-09;4!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6!DOID:169;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.84e-34,1;DOID:4549,1.84e-34,1;DOID:5861,1.84e-34,1;DOID:6496,1.84e-34,1;DOID:5093,1.22e-09,4;DOID:1612,1.22e-09,4;DOID:201,7.17e-07,6;DOID:0060100,7.17e-07,6;DOID:169,8.02e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;8.34e-34;1!UBERON:0001343;8.34e-34;1!UBERON:0004910;8.34e-34;1!UBERON:0004813;8.34e-34;1!UBERON:0004909;1.17e-17;2!UBERON:0002418;1.85e-12;3!UBERON:0004755;1.85e-12;3!UBERON:0001052;1.63e-09;4!UBERON:0005904;1.63e-09;4!UBERON:0000013;6.34e-08;5!UBERON:0002410;6.34e-08;5!UBERON:0004907;7.25e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,9.85e-34,1;UBERON:0001343,9.85e-34,1;UBERON:0004910,9.85e-34,1;UBERON:0005154,9.85e-34,1;UBERON:0005295,9.85e-34,1;UBERON:0004813,9.85e-34,1;UBERON:0005297,9.85e-34,1;UBERON:0005294,9.85e-34,1;UBERON:0010141,9.85e-34,1;UBERON:0005891,9.85e-34,1;UBERON:0004909,1.27e-17,2;UBERON:0002418,1.85e-12,3;UBERON:0004755,1.85e-12,3;UBERON:0001052,1.57e-09,4;UBERON:0005904,1.70e-09,4;UBERON:0000013,6.13e-08,5;UBERON:0002410,6.13e-08,5;UBERON:0004907,7.01e-08,5 | |||
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|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.384417447767103,0,0.482561763430822,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.386682873168488,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,3.38556089410803,0,0,0,0,0,0,0,0.694499979733169,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,10.3259668229055,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,2.81000943484129,0,0,0.701139929541673,0,0,0,0,0.686520205190771,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.686791410365586,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,2.83078695340614,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0.275684698604535,0.250707539292375,0,0,0,0,0,0.476128862927481,0,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr13:23734149..23734161,+ | |short_description=p@chr13:23734149..23734161,+ | ||
}} | }} |
Latest revision as of 15:06, 24 July 2015
Short description: | p@chr13:23734149..23734161, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:23734149..23734161, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 9.85e-34 | 1 |
seminiferous tubule epithelial cell | 9.85e-34 | 1 |
Sertoli cell | 9.85e-34 | 1 |
Merkel cell | 9.07e-18 | 2 |
keratinocyte | 6.55e-08 | 5 |
chondroblast | 7.17e-07 | 6 |
chondrocyte | 7.17e-07 | 6 |
stratified squamous epithelial cell | 8.48e-07 | 6 |
keratin accumulating cell | 8.48e-07 | 6 |
stratified epithelial cell | 8.48e-07 | 6 |
keratinizing barrier epithelial cell | 8.48e-07 | 6 |
epithelial fate stem cell | 8.48e-07 | 6 |
stratified epithelial stem cell | 8.48e-07 | 6 |
surface ectodermal cell | 8.48e-07 | 6 |
protein secreting cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 9.85e-34 | 1 |
seminiferous tubule of testis | 9.85e-34 | 1 |
epithelium of male gonad | 9.85e-34 | 1 |
epithelial cord | 9.85e-34 | 1 |
sex cord | 9.85e-34 | 1 |
seminiferous tubule epithelium | 9.85e-34 | 1 |
testis sex cord | 9.85e-34 | 1 |
genital ridge | 9.85e-34 | 1 |
primitive sex cord of indifferent gonad | 9.85e-34 | 1 |
coelomic epithelium | 9.85e-34 | 1 |
epithelium of gonad | 1.27e-17 | 2 |
cartilage tissue | 1.85e-12 | 3 |
skeletal tissue | 1.85e-12 | 3 |
rectum | 1.57e-09 | 4 |
duct of male reproductive system | 1.70e-09 | 4 |
sympathetic nervous system | 6.13e-08 | 5 |
autonomic nervous system | 6.13e-08 | 5 |
lower digestive tract | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.84e-34 | 1 |
extraosseous chondrosarcoma | 1.84e-34 | 1 |
myxoid chondrosarcoma | 1.84e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 1.84e-34 | 1 |
thoracic cancer | 1.22e-09 | 4 |
breast cancer | 1.22e-09 | 4 |
connective tissue cancer | 7.17e-07 | 6 |
musculoskeletal system cancer | 7.17e-07 | 6 |
neuroendocrine tumor | 8.02e-07 | 6 |