FFCP PHASE1:Hg19::chr13:90939632..90939664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:90939632..90939664,+ | |||
|coexpression_cluster_id=C116 | |coexpression_cluster_id=C116 | ||
|description=CAGE_peak_at_chr13:90939632..90939664,+ | |description=CAGE_peak_at_chr13:90939632..90939664,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002195!2.81e-08!2;CL:0002571!2.81e-08!2 | |ontology_enrichment_celltype=CL:0002195!2.81e-08!2;CL:0002571!2.81e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.58e-26;1!CL:0000786;3.58e-26;1!CL:0000945;5.15e-10;24!CL:0000083;1.80e-07;4 | |ontology_enrichment_celltype_v019=CL:0000946;3.58e-26;1!CL:0000786;3.58e-26;1!CL:0000945;5.15e-10;24!CL:0000083;1.80e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.58e-26,1;CL:0000786,3.58e-26,1;CL:0000980,3.58e-26,1;CL:0000785,8.28e-14,2;CL:0000955,8.28e-14,2;CL:0000818,8.28e-14,2;CL:0000954,8.28e-14,2;CL:0000816,8.28e-14,2;CL:0000945,5.23e-10,24;CL:0000826,5.23e-10,24;CL:0000817,1.19e-09,3;CL:0000083,1.80e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000954;8.28e-14;2 | |ontology_enrichment_development_v019=CL:0000954;8.28e-14;2 | ||
|ontology_enrichment_disease=DOID:162!2.99e-15!235;DOID:14566!9.61e-15!239;DOID:0050687!1.17e-13!143;DOID:305!9.73e-12!106;DOID:74!2.01e-08!2;DOID:7!1.47e-07!39 | |ontology_enrichment_disease=DOID:162!2.99e-15!235;DOID:14566!9.61e-15!239;DOID:0050687!1.17e-13!143;DOID:305!9.73e-12!106;DOID:74!2.01e-08!2;DOID:7!1.47e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:4960;2.16e-26;1!DOID:0070004;2.16e-26;1!DOID:2355;1.11e-25;1!DOID:4074;1.21e-13;2!DOID:4905;1.21e-13;2!DOID:3498;1.21e-13;2!DOID:74;1.46e-13;2!DOID:1793;1.80e-07;4!DOID:1287;1.98e-07;4 | |ontology_enrichment_disease_v019=DOID:4960;2.16e-26;1!DOID:0070004;2.16e-26;1!DOID:2355;1.11e-25;1!DOID:4074;1.21e-13;2!DOID:4905;1.21e-13;2!DOID:3498;1.21e-13;2!DOID:74;1.46e-13;2!DOID:1793;1.80e-07;4!DOID:1287;1.98e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,2.16e-26,1;DOID:0070004,2.16e-26,1;DOID:2355,1.26e-25,1;DOID:4074,1.21e-13,2;DOID:4905,1.21e-13,2;DOID:3498,1.21e-13,2;DOID:74,1.55e-13,2;DOID:1793,1.80e-07,4;DOID:1287,2.04e-07,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.98e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001052;1.98e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.92e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42707567183837,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0.179515288819544,0.217294743844016,0,0,0,0,0,0,0,0,0,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15231080825299,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.416024019039416,0,0.783939179315021,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0.586654148204409,0,0,0.39961921916426,0,0,0.857974989309823,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.196854963029498,1.01607998478941,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51508864121364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0.106691729694141,296.037550036942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0.917142992608395,0,0.762764190934334,0,0,0,0.40341013740704,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0995686933568,0,0,0,0,0,0,0,1.40136081656895,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.98150233615243,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,20.8207974312258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917899467677836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:90939632..90939664,+ | |short_description=p@chr13:90939632..90939664,+ | ||
}} | }} |
Latest revision as of 17:26, 24 July 2015
Short description: | p@chr13:90939632..90939664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:90939632..90939664, + |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.58e-26 | 1 |
plasma cell | 3.58e-26 | 1 |
plasmablast | 3.58e-26 | 1 |
mature B cell | 8.28e-14 | 2 |
pre-B-II cell | 8.28e-14 | 2 |
transitional stage B cell | 8.28e-14 | 2 |
small pre-B-II cell | 8.28e-14 | 2 |
immature B cell | 8.28e-14 | 2 |
lymphocyte of B lineage | 5.23e-10 | 24 |
pro-B cell | 5.23e-10 | 24 |
precursor B cell | 1.19e-09 | 3 |
epithelial cell of pancreas | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.16e-26 | 1 |
myeloma | 2.16e-26 | 1 |
anemia | 1.26e-25 | 1 |
pancreas adenocarcinoma | 1.21e-13 | 2 |
pancreatic carcinoma | 1.21e-13 | 2 |
pancreatic ductal adenocarcinoma | 1.21e-13 | 2 |
hematopoietic system disease | 1.55e-13 | 2 |
pancreatic cancer | 1.80e-07 | 4 |
cardiovascular system disease | 2.04e-07 | 4 |