FFCP PHASE1:Hg19::chr13:99934429..99934435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:99934429..99934435,+ | |||
|coexpression_cluster_id=C1712 | |||
|description=CAGE_peak_at_chr13:99934429..99934435,+ | |description=CAGE_peak_at_chr13:99934429..99934435,+ | ||
|id=chr13:99934429..99934435,+ | |id=chr13:99934429..99934435,+ | ||
|ontology_enrichment_celltype=CL:0002393!1.24e-50!9;CL:0002397!1.24e-50!9;CL:0002057!1.24e-45!42;CL:0000860!2.55e-42!45;CL:0000766!4.91e-35!76;CL:0000738!9.21e-29!140;CL:0002194!1.52e-28!63;CL:0000576!1.52e-28!63;CL:0000040!1.52e-28!63;CL:0000559!1.52e-28!63;CL:0002009!1.48e-27!65;CL:0000839!2.50e-25!70;CL:0000557!6.41e-25!71;CL:0002087!9.33e-25!119;CL:0000037!2.18e-22!172;CL:0000566!2.18e-22!172;CL:0000763!2.52e-22!112;CL:0000049!2.52e-22!112;CL:0000988!7.49e-21!182;CL:0002032!6.37e-20!165;CL:0000837!6.37e-20!165;CL:0002031!1.72e-19!124;CL:0000767!1.87e-18!3;CL:0000875!1.79e-17!3;CL:0002396!1.79e-17!3;CL:0000623!2.66e-17!3;CL:0000825!2.66e-17!3;CL:0000094!4.94e-12!8;CL:0000081!8.91e-09!11;CL:0000134!1.26e-08!358;CL:0000842!1.62e-08!3;CL:0002320!2.39e-08!365;CL:0000219!2.32e-07!390 | |ontology_enrichment_celltype=CL:0002393!1.24e-50!9;CL:0002397!1.24e-50!9;CL:0002057!1.24e-45!42;CL:0000860!2.55e-42!45;CL:0000766!4.91e-35!76;CL:0000738!9.21e-29!140;CL:0002194!1.52e-28!63;CL:0000576!1.52e-28!63;CL:0000040!1.52e-28!63;CL:0000559!1.52e-28!63;CL:0002009!1.48e-27!65;CL:0000839!2.50e-25!70;CL:0000557!6.41e-25!71;CL:0002087!9.33e-25!119;CL:0000037!2.18e-22!172;CL:0000566!2.18e-22!172;CL:0000763!2.52e-22!112;CL:0000049!2.52e-22!112;CL:0000988!7.49e-21!182;CL:0002032!6.37e-20!165;CL:0000837!6.37e-20!165;CL:0002031!1.72e-19!124;CL:0000767!1.87e-18!3;CL:0000875!1.79e-17!3;CL:0002396!1.79e-17!3;CL:0000623!2.66e-17!3;CL:0000825!2.66e-17!3;CL:0000094!4.94e-12!8;CL:0000081!8.91e-09!11;CL:0000134!1.26e-08!358;CL:0000842!1.62e-08!3;CL:0002320!2.39e-08!365;CL:0000219!2.32e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0002393;5.11e-66;6!CL:0002397;5.11e-66;6!CL:0000576;7.93e-15;48!CL:0000767;1.41e-09;3!CL:0000766;1.78e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.54e-44,9;CL:0002397,2.54e-44,9;CL:0000860,2.20e-21,42;CL:0002057,2.20e-21,42;CL:0000473,9.69e-19,48;CL:0000234,9.69e-19,48;CL:0000766,1.16e-16,72;CL:0002194,4.99e-15,59;CL:0000576,4.99e-15,59;CL:0000040,4.99e-15,59;CL:0000559,4.99e-15,59;CL:0002009,1.51e-14,61;CL:0000839,1.79e-13,66;CL:0000557,2.81e-13,67;CL:0000763,3.60e-11,108;CL:0000049,3.60e-11,108;CL:0000767,1.81e-09,3;CL:0000738,7.06e-09,136;CL:0002087,8.32e-08,115;CL:0002032,1.72e-07,161;CL:0000837,1.72e-07,161;CL:0002031,1.75e-07,120;CL:0000037,3.55e-07,168;CL:0000988,8.33e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.18e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.07e-21!80;UBERON:0002390!3.14e-20!102;UBERON:0003061!3.14e-20!102;UBERON:0001474!6.42e-20!86;UBERON:0002193!4.83e-18!112;UBERON:0004765!2.16e-16!101;UBERON:0001434!2.16e-16!101;UBERON:0002405!6.34e-14!115;UBERON:0002204!2.20e-08!167;UBERON:0003081!3.21e-08!216;UBERON:0002384!5.76e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.72e-12,76;UBERON:0001474,6.76e-11,82;UBERON:0004765,6.05e-10,90;UBERON:0002405,1.25e-09,93;UBERON:0002390,3.82e-09,98;UBERON:0003061,3.82e-09,98;UBERON:0001434,5.79e-09,100;UBERON:0002193,2.62e-08,108 | |||
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|short_description=p@chr13:99934429..99934435,+ | |short_description=p@chr13:99934429..99934435,+ | ||
}} | }} |
Latest revision as of 17:44, 24 July 2015
Short description: | p@chr13:99934429..99934435, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:99934429..99934435, + |
Coexpression cluster: | C1712_CD14_Peripheral_Basophils_Mast_CD14CD16_CD34_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.54e-44 | 9 |
CD14-positive, CD16-positive monocyte | 2.54e-44 | 9 |
classical monocyte | 2.20e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.20e-21 | 42 |
defensive cell | 9.69e-19 | 48 |
phagocyte | 9.69e-19 | 48 |
myeloid leukocyte | 1.16e-16 | 72 |
monopoietic cell | 4.99e-15 | 59 |
monocyte | 4.99e-15 | 59 |
monoblast | 4.99e-15 | 59 |
promonocyte | 4.99e-15 | 59 |
macrophage dendritic cell progenitor | 1.51e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.79e-13 | 66 |
granulocyte monocyte progenitor cell | 2.81e-13 | 67 |
myeloid cell | 3.60e-11 | 108 |
common myeloid progenitor | 3.60e-11 | 108 |
basophil | 1.81e-09 | 3 |
leukocyte | 7.06e-09 | 136 |
nongranular leukocyte | 8.32e-08 | 115 |
hematopoietic oligopotent progenitor cell | 1.72e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 1.75e-07 | 120 |
hematopoietic stem cell | 3.55e-07 | 168 |
hematopoietic cell | 8.33e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.72e-12 | 76 |
bone element | 6.76e-11 | 82 |
skeletal element | 6.05e-10 | 90 |
immune system | 1.25e-09 | 93 |
hematopoietic system | 3.82e-09 | 98 |
blood island | 3.82e-09 | 98 |
skeletal system | 5.79e-09 | 100 |
hemolymphoid system | 2.62e-08 | 108 |