FFCP PHASE1:Hg19::chr14:105949595..105949605,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:105949595..105949605,+ | |||
|coexpression_cluster_id=C695 | |coexpression_cluster_id=C695 | ||
|description=CAGE_peak_at_chr14:105949595..105949605,+ | |description=CAGE_peak_at_chr14:105949595..105949605,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;6.01e-21;5!CL:0000349;1.67e-12;19!CL:0002178;1.01e-09;3!CL:0002541;1.35e-09;3 | |ontology_enrichment_celltype_v019=CL:0002537;6.01e-21;5!CL:0000349;1.67e-12;19!CL:0002178;1.01e-09;3!CL:0002541;1.35e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,6.01e-21,5;CL:0000349,1.64e-12,19;CL:0002178,1.01e-09,3;CL:0002541,1.30e-09,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.08e-16!3;UBERON:0004054!2.08e-16!3;UBERON:0005904!1.95e-12!4 | |ontology_enrichment_uberon=UBERON:0006947!2.08e-16!3;UBERON:0004054!2.08e-16!3;UBERON:0005904!1.95e-12!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.58e-23;10!UBERON:0000158;4.58e-23;10!UBERON:0000305;2.85e-15;7!UBERON:0000478;4.85e-10;24!UBERON:0003124;1.35e-09;3!UBERON:0000920;1.35e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0005631;4.58e-23;10!UBERON:0000158;4.58e-23;10!UBERON:0000305;2.85e-15;7!UBERON:0000478;4.85e-10;24!UBERON:0003124;1.35e-09;3!UBERON:0000920;1.35e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.02e-16,14;UBERON:0000158,1.02e-16,14;UBERON:0000305,2.85e-15,7;UBERON:0004871,1.71e-13,8;UBERON:0000478,4.77e-10,24;UBERON:0000920,1.30e-09,3 | |||
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|short_description=p@chr14:105949595..105949605,+ | |short_description=p@chr14:105949595..105949605,+ | ||
}} | }} |
Latest revision as of 18:35, 24 July 2015
Short description: | p@chr14:105949595..105949605, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:105949595..105949605, + |
Coexpression cluster: | C695_gastric_mesothelioma_amniotic_chorionic_Mast_tongue_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 6.01e-21 | 5 |
extraembryonic cell | 1.64e-12 | 19 |
epithelial cell of stomach | 1.01e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.02e-16 | 14 |
membranous layer | 1.02e-16 | 14 |
amnion | 2.85e-15 | 7 |
somatic layer of lateral plate mesoderm | 1.71e-13 | 8 |
extraembryonic structure | 4.77e-10 | 24 |
egg chorion | 1.30e-09 | 3 |