FFCP PHASE1:Hg19::chr14:106321813..106321821,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-229bp_to_AY671148,AY671772,AY671782,AY671783_5end | |association_with_transcript=-229bp_to_AY671148,AY671772,AY671782,AY671783_5end | ||
|cluster_id=chr14:106321813..106321821,+ | |||
|coexpression_cluster_id=C350 | |||
|description=CAGE_peak_5_at_AY671148_5end,CAGE_peak_5_at_AY671772_5end,CAGE_peak_5_at_AY671782_5end,CAGE_peak_5_at_AY671783_5end | |description=CAGE_peak_5_at_AY671148_5end,CAGE_peak_5_at_AY671772_5end,CAGE_peak_5_at_AY671782_5end,CAGE_peak_5_at_AY671783_5end | ||
|id=chr14:106321813..106321821,+ | |id=chr14:106321813..106321821,+ | ||
|ontology_enrichment_celltype=CL:0000945!6.21e-63!24;CL:0000826!6.21e-63!24;CL:0000542!3.32e-34!53;CL:0000051!3.32e-34!53;CL:0000838!7.05e-31!52;CL:0000236!1.14e-27!14;CL:0002087!1.13e-14!119;CL:0002031!2.93e-12!124;CL:0000738!6.75e-12!140;CL:0002032!9.66e-11!165;CL:0000837!9.66e-11!165;CL:0000037!3.86e-10!172;CL:0000566!3.86e-10!172;CL:0000988!2.32e-09!182 | |ontology_enrichment_celltype=CL:0000945!6.21e-63!24;CL:0000826!6.21e-63!24;CL:0000542!3.32e-34!53;CL:0000051!3.32e-34!53;CL:0000838!7.05e-31!52;CL:0000236!1.14e-27!14;CL:0002087!1.13e-14!119;CL:0002031!2.93e-12!124;CL:0000738!6.75e-12!140;CL:0002032!9.66e-11!165;CL:0000837!9.66e-11!165;CL:0000037!3.86e-10!172;CL:0000566!3.86e-10!172;CL:0000988!2.32e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.19e-15;24!CL:0000236;3.64e-13;13!CL:0000542;3.60e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.25e-15,24;CL:0000826,1.25e-15,24;CL:0000542,1.23e-12,53;CL:0000051,1.23e-12,53;CL:0000236,2.82e-12,14;CL:0000838,1.20e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000051;3.60e-11;53 | |||
|ontology_enrichment_disease=DOID:12603!7.03e-08!1;DOID:4960!3.20e-07!1;DOID:0070004!3.20e-07!1;DOID:2355!3.84e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:12603;9.91e-41;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,9.91e-41,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!5.97e-09!3;UBERON:0004854!5.97e-09!3;UBERON:0009034!5.97e-09!3;UBERON:0002095!5.97e-09!3;UBERON:0004782!5.97e-09!3;UBERON:0003281!5.97e-09!3;UBERON:0009664!5.97e-09!3;UBERON:0002296!5.97e-09!3;UBERON:0005602!5.97e-09!3;UBERON:0001179!5.97e-09!3;UBERON:0006293!5.97e-09!3;UBERON:0000029!7.50e-08!1;UBERON:0001736!1.61e-07!1;UBERON:0006298!1.61e-07!1;UBERON:0002372!4.61e-07!1;UBERON:0001961!4.61e-07!1;UBERON:0001744!4.61e-07!1;UBERON:0001735!4.61e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.21e-40;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.48e-40,1 | |||
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|short_description=p5@AY671148,p5@AY671772,p5@AY671782,p5@AY671783 | |short_description=p5@AY671148,p5@AY671772,p5@AY671782,p5@AY671783 | ||
}} | }} |
Latest revision as of 18:40, 24 July 2015
Short description: | p5@AY671148, p5@AY671772, p5@AY671782, p5@AY671783 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AY671148_5end, CAGE_peak_5_at_AY671772_5end, CAGE_peak_5_at_AY671782_5end, CAGE_peak_5_at_AY671783_5end |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | -229bp_to_AY671148, AY671772, AY671782, AY671783_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.25e-15 | 24 |
pro-B cell | 1.25e-15 | 24 |
lymphocyte | 1.23e-12 | 53 |
common lymphoid progenitor | 1.23e-12 | 53 |
B cell | 2.82e-12 | 14 |
lymphoid lineage restricted progenitor cell | 1.20e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.48e-40 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 9.91e-41 | 1 |