FFCP PHASE1:Hg19::chr14:21731490..21731507,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:21731490..21731507,- | |||
|coexpression_cluster_id=C3406 | |||
|description=CAGE_peak_at_chr14:21731490..21731507,- | |description=CAGE_peak_at_chr14:21731490..21731507,- | ||
|id=chr14:21731490..21731507,- | |id=chr14:21731490..21731507,- | ||
|ontology_enrichment_celltype=CL:0000738!8.47e-19!140;CL:0002087!4.31e-17!119;CL:0000037!7.46e-17!172;CL:0000566!7.46e-17!172;CL:0000988!6.51e-16!182;CL:0002032!5.30e-15!165;CL:0000837!5.30e-15!165;CL:0002031!6.55e-15!124;CL:0000766!1.88e-13!76;CL:0002057!2.94e-13!42;CL:0000860!1.75e-12!45;CL:0002194!1.07e-10!63;CL:0000576!1.07e-10!63;CL:0000040!1.07e-10!63;CL:0000559!1.07e-10!63;CL:0002009!3.61e-10!65;CL:0000839!4.18e-10!70;CL:0000557!1.49e-09!71;CL:0000763!2.85e-09!112;CL:0000049!2.85e-09!112 | |ontology_enrichment_celltype=CL:0000738!8.47e-19!140;CL:0002087!4.31e-17!119;CL:0000037!7.46e-17!172;CL:0000566!7.46e-17!172;CL:0000988!6.51e-16!182;CL:0002032!5.30e-15!165;CL:0000837!5.30e-15!165;CL:0002031!6.55e-15!124;CL:0000766!1.88e-13!76;CL:0002057!2.94e-13!42;CL:0000860!1.75e-12!45;CL:0002194!1.07e-10!63;CL:0000576!1.07e-10!63;CL:0000040!1.07e-10!63;CL:0000559!1.07e-10!63;CL:0002009!3.61e-10!65;CL:0000839!4.18e-10!70;CL:0000557!1.49e-09!71;CL:0000763!2.85e-09!112;CL:0000049!2.85e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-17;33!CL:0002057;1.01e-17;33!CL:0000473;2.61e-13;39!CL:0000234;2.61e-13;39!CL:0000576;2.31e-11;48!CL:0002087;5.77e-09;104!CL:0000766;2.50e-08;69!CL:0000094;4.69e-07;8!CL:0000738;6.88e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.81e-26,136;CL:0002087,4.65e-23,115;CL:0000988,9.36e-23,177;CL:0000037,4.54e-22,168;CL:0002031,3.12e-20,120;CL:0000860,7.59e-20,42;CL:0002057,7.59e-20,42;CL:0002032,7.76e-20,161;CL:0000837,7.76e-20,161;CL:0000766,8.69e-19,72;CL:0000473,1.34e-17,48;CL:0000234,1.34e-17,48;CL:0002194,7.81e-15,59;CL:0000576,7.81e-15,59;CL:0000040,7.81e-15,59;CL:0000559,7.81e-15,59;CL:0002009,4.50e-14,61;CL:0000839,1.97e-13,66;CL:0000557,4.19e-13,67;CL:0000763,2.92e-12,108;CL:0000049,2.92e-12,108;CL:0000838,5.41e-08,52;CL:0000542,9.71e-08,53;CL:0000051,9.71e-08,53;CL:0000094,4.44e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-15;42 | |||
|ontology_enrichment_disease=DOID:162!2.21e-08!235;DOID:14566!2.35e-08!239;DOID:0050687!8.21e-08!143 | |ontology_enrichment_disease=DOID:162!2.21e-08!235;DOID:14566!2.35e-08!239;DOID:0050687!8.21e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.38e-10!102;UBERON:0003061!5.38e-10!102;UBERON:0002193!6.07e-09!112;UBERON:0002371!2.16e-08!80;UBERON:0001474!5.74e-08!86 | |ontology_enrichment_uberon=UBERON:0002390!5.38e-10!102;UBERON:0003061!5.38e-10!102;UBERON:0002193!6.07e-09!112;UBERON:0002371!2.16e-08!80;UBERON:0001474!5.74e-08!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.33e-12,98;UBERON:0003061,1.33e-12,98;UBERON:0002371,2.18e-12,76;UBERON:0001474,7.70e-11,82;UBERON:0002193,1.75e-10,108;UBERON:0004765,4.00e-09,90;UBERON:0002405,1.45e-08,93;UBERON:0001434,2.08e-07,100 | |||
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| ||
|short_description=p@chr14:21731490..21731507,- | |short_description=p@chr14:21731490..21731507,- | ||
}} | }} |
Latest revision as of 19:00, 24 July 2015
Short description: | p@chr14:21731490..21731507, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:21731490..21731507, - |
Coexpression cluster: | C3406_CD14_Neutrophils_CD4_CD8_Natural_Eosinophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.81e-26 | 136 |
nongranular leukocyte | 4.65e-23 | 115 |
hematopoietic cell | 9.36e-23 | 177 |
hematopoietic stem cell | 4.54e-22 | 168 |
hematopoietic lineage restricted progenitor cell | 3.12e-20 | 120 |
classical monocyte | 7.59e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.59e-20 | 42 |
hematopoietic oligopotent progenitor cell | 7.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.76e-20 | 161 |
myeloid leukocyte | 8.69e-19 | 72 |
defensive cell | 1.34e-17 | 48 |
phagocyte | 1.34e-17 | 48 |
monopoietic cell | 7.81e-15 | 59 |
monocyte | 7.81e-15 | 59 |
monoblast | 7.81e-15 | 59 |
promonocyte | 7.81e-15 | 59 |
macrophage dendritic cell progenitor | 4.50e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.97e-13 | 66 |
granulocyte monocyte progenitor cell | 4.19e-13 | 67 |
myeloid cell | 2.92e-12 | 108 |
common myeloid progenitor | 2.92e-12 | 108 |
lymphoid lineage restricted progenitor cell | 5.41e-08 | 52 |
lymphocyte | 9.71e-08 | 53 |
common lymphoid progenitor | 9.71e-08 | 53 |
granulocyte | 4.44e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.33e-12 | 98 |
blood island | 1.33e-12 | 98 |
bone marrow | 2.18e-12 | 76 |
bone element | 7.70e-11 | 82 |
hemolymphoid system | 1.75e-10 | 108 |
skeletal element | 4.00e-09 | 90 |
immune system | 1.45e-08 | 93 |
skeletal system | 2.08e-07 | 100 |