FFCP PHASE1:Hg19::chr14:22896809..22896821,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:22896809..22896821,-
|short_description=p@chr14:22896809..22896821,-
|description=CAGE_peak_at_chr14:22896809..22896821,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:22896809..22896821,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr14:22896809..22896821,- | |||
|id=chr14:22896809..22896821,- | |||
|ontology_enrichment_celltype=CL:0000763!3.74e-15!112;CL:0000049!3.74e-15!112;CL:0000037!4.26e-13!172;CL:0000566!4.26e-13!172;CL:0000988!6.07e-12!182;CL:0002032!7.41e-12!165;CL:0000837!7.41e-12!165;CL:0000094!1.01e-10!8;CL:0000764!1.95e-08!2;CL:0000765!1.95e-08!2;CL:0000050!1.95e-08!2;CL:0000038!1.95e-08!2;CL:0000558!1.95e-08!2;CL:0000547!1.95e-08!2;CL:0000549!1.95e-08!2;CL:0000550!1.95e-08!2;CL:0000552!1.95e-08!2;CL:0000081!1.07e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.85e-18;2!CL:0000558;4.85e-18;2!CL:0000775;7.77e-12;3!CL:0000094;9.54e-10;8!CL:0002127;1.68e-09;1!CL:0000037;1.68e-09;1!CL:0000911;1.68e-09;1!CL:0001024;1.68e-09;1!CL:0000814;1.68e-09;1!CL:0000081;3.20e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.85e-18,2;CL:0000765,4.85e-18,2;CL:0000050,4.85e-18,2;CL:0000038,4.85e-18,2;CL:0000558,4.85e-18,2;CL:0000547,4.85e-18,2;CL:0000549,4.85e-18,2;CL:0000550,4.85e-18,2;CL:0000552,4.85e-18,2;CL:0000775,5.28e-12,3;CL:0000094,8.32e-10,8;CL:0001024,1.62e-09,1;CL:0002127,1.76e-09,1;CL:0000914,1.76e-09,1;CL:0000911,1.76e-09,1;CL:0000814,1.76e-09,1;CL:0002042,1.76e-09,1;CL:0002039,1.76e-09,1;CL:0002040,1.76e-09,1;CL:0002041,1.76e-09,1;CL:0000763,6.90e-09,108;CL:0000049,6.90e-09,108;CL:0000081,2.90e-07,11;CL:0000037,4.10e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.81e-24!31;DOID:1240!2.91e-21!39;DOID:2531!3.01e-15!51;DOID:0060083!3.01e-15!51 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.36e-11;39!DOID:8692;1.67e-11;31!DOID:225;6.31e-10;1!DOID:2531;3.57e-08;51!DOID:0060083;3.57e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.77e-12,39;DOID:8692,2.66e-12,31;DOID:225,5.79e-10,1;DOID:2531,2.66e-09,51;DOID:0060083,2.66e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.57e-18!15;UBERON:0000179!4.57e-18!15;UBERON:0000463!4.57e-18!15;UBERON:0002390!2.15e-07!102;UBERON:0003061!2.15e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.45e-35;15!UBERON:0000179;4.45e-35;15!UBERON:0000463;4.45e-35;15!UBERON:0002390;8.95e-19;32!UBERON:0002193;1.55e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.08e-35,15;UBERON:0000179,4.08e-35,15;UBERON:0000463,4.08e-35,15;UBERON:0002390,6.31e-07,98;UBERON:0003061,6.31e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,1.45710687191585,0.197030760201927,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16593765627276,3.92153176537351,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07447609232169,5.35246044999663,6.83576624608995,2.85878130549347,1.23408681925858,8.43015304550532,2.70015718619057,1.58625035258854,0,0,0,0,0,0,0,0,0.957526850661834,0.211673582723883,0.324621940274555,1.12318871245384,0.228234679033192,4.0736772900986,5.01268954180134,0,1.2847046008296,0,0.851692475380653,1.37402137902306,0.307240764308458,0.447352215784832,0,1.56310476321632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35470384592537,0.664846727600626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26766918776564,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,1.45710687191585,0.197030760201927,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16593765627276,3.92153176537351,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07447609232169,5.35246044999663,6.83576624608995,2.85878130549347,1.23408681925858,8.43015304550532,2.70015718619057,1.58625035258854,0,0,0,0,0,0,0,0,0.957526850661834,0.211673582723883,0.324621940274555,1.12318871245384,0.228234679033192,4.0736772900986,5.01268954180134,0,1.2847046008296,0,0.851692475380653,1.37402137902306,0.307240764308458,0.447352215784832,0,1.56310476321632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35470384592537,0.664846727600626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26766918776564,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:22896809..22896821,- | |||
}} | }} |
Latest revision as of 19:11, 24 July 2015
Short description: | p@chr14:22896809..22896821, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:22896809..22896821, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.85e-18 | 2 |
erythroblast | 4.85e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 4.85e-18 | 2 |
erythroid progenitor cell | 4.85e-18 | 2 |
reticulocyte | 4.85e-18 | 2 |
proerythroblast | 4.85e-18 | 2 |
basophilic erythroblast | 4.85e-18 | 2 |
polychromatophilic erythroblast | 4.85e-18 | 2 |
orthochromatic erythroblast | 4.85e-18 | 2 |
neutrophil | 5.28e-12 | 3 |
granulocyte | 8.32e-10 | 8 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.62e-09 | 1 |
innate effector T cell | 1.76e-09 | 1 |
immature NK T cell | 1.76e-09 | 1 |
effector T cell | 1.76e-09 | 1 |
mature NK T cell | 1.76e-09 | 1 |
immature NK T cell stage IV | 1.76e-09 | 1 |
immature NK T cell stage I | 1.76e-09 | 1 |
immature NK T cell stage II | 1.76e-09 | 1 |
immature NK T cell stage III | 1.76e-09 | 1 |
myeloid cell | 6.90e-09 | 108 |
common myeloid progenitor | 6.90e-09 | 108 |
blood cell | 2.90e-07 | 11 |
hematopoietic stem cell | 4.10e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 4.08e-35 | 15 |
haemolymphatic fluid | 4.08e-35 | 15 |
organism substance | 4.08e-35 | 15 |
hematopoietic system | 6.31e-07 | 98 |
blood island | 6.31e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.77e-12 | 39 |
myeloid leukemia | 2.66e-12 | 31 |
syndrome | 5.79e-10 | 1 |
hematologic cancer | 2.66e-09 | 51 |
immune system cancer | 2.66e-09 | 51 |