FFCP PHASE1:Hg19::chr14:23574164..23574179,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010aki.1_5end | |association_with_transcript=0bp_to_uc010aki.1_5end | ||
|cluster_id=chr14:23574164..23574179,- | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_3_at_uc010aki.1_5end | |description=CAGE_peak_3_at_uc010aki.1_5end | ||
|id=chr14:23574164..23574179,- | |id=chr14:23574164..23574179,- | ||
|ontology_enrichment_celltype=CL:0002549!1.35e-14!2;CL:0002602!1.35e-14!2;CL:0002564!4.20e-10!3;CL:0000214!9.30e-10!3;CL:0000708!2.73e-09!3;CL:0000327!1.62e-07!14 | |ontology_enrichment_celltype=CL:0002549!1.35e-14!2;CL:0002602!1.35e-14!2;CL:0002564!4.20e-10!3;CL:0000214!9.30e-10!3;CL:0000708!2.73e-09!3;CL:0000327!1.62e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002602;5.96e-34;2!CL:0002564;3.66e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,7.05e-34,2;CL:0002564,3.27e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.41e-12!5;DOID:450!3.41e-12!5;DOID:66!3.41e-12!5;DOID:423!3.41e-12!5;DOID:0080000!3.41e-12!5;DOID:11722!3.41e-12!5 | |ontology_enrichment_disease=DOID:17!3.41e-12!5;DOID:450!3.41e-12!5;DOID:66!3.41e-12!5;DOID:423!3.41e-12!5;DOID:0080000!3.41e-12!5;DOID:11722!3.41e-12!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0011135;3.74e-53;5!UBERON:0002216;3.74e-53;5!UBERON:0011134;3.74e-53;5!UBERON:0002209;3.74e-53;5!UBERON:0002213;3.74e-53;5!UBERON:0007844;3.74e-53;5!UBERON:0011138;3.74e-53;5!UBERON:0001130;3.74e-53;5!UBERON:0001066;3.74e-53;5!UBERON:0001468;3.74e-53;5!UBERON:0006444;5.96e-34;2!UBERON:0001995;5.96e-34;2!UBERON:0004715;5.96e-34;2!UBERON:0004905;9.08e-34;8!UBERON:0000982;9.08e-34;8!UBERON:0004770;9.08e-34;8!UBERON:0002418;3.66e-23;3!UBERON:0004755;3.66e-23;3!UBERON:0002242;3.66e-23;3!UBERON:0000075;1.51e-17;16!UBERON:0004765;2.91e-11;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.74e-53,5;UBERON:0002216,3.74e-53,5;UBERON:0011134,3.74e-53,5;UBERON:0002209,3.74e-53,5;UBERON:0002213,3.74e-53,5;UBERON:0005856,3.74e-53,5;UBERON:0005866,3.74e-53,5;UBERON:0005863,3.74e-53,5;UBERON:0007844,3.74e-53,5;UBERON:0011138,3.74e-53,5;UBERON:0001130,3.74e-53,5;UBERON:0001066,3.74e-53,5;UBERON:0001468,3.74e-53,5;UBERON:0006444,7.05e-34,2;UBERON:0001995,7.05e-34,2;UBERON:0004715,7.05e-34,2;UBERON:0004905,9.08e-34,8;UBERON:0000982,9.08e-34,8;UBERON:0004770,9.08e-34,8;UBERON:0002242,3.27e-23,3;UBERON:0003068,3.27e-23,3;UBERON:0002328,3.27e-23,3;UBERON:0004880,3.27e-23,3;UBERON:0002418,4.09e-23,3;UBERON:0004755,4.09e-23,3;UBERON:0000075,1.51e-17,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.11389717664042,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96306386750624,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,17.9911871436241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.11389717664042,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96306386750624,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,17.9911871436241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@uc010aki.1 | |short_description=p3@uc010aki.1 | ||
}} | }} |
Latest revision as of 19:26, 24 July 2015
Short description: | p3@uc010aki.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc010aki.1_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | 0bp_to_uc010aki.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 7.05e-34 | 2 |
nucleus pulposus cell of intervertebral disc | 3.27e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 3.74e-53 | 5 |
symphysis | 3.74e-53 | 5 |
nonsynovial joint | 3.74e-53 | 5 |
fibrous joint | 3.74e-53 | 5 |
cartilaginous joint | 3.74e-53 | 5 |
developing mesenchymal condensation | 3.74e-53 | 5 |
pre-cartilage condensation | 3.74e-53 | 5 |
cartilaginous condensation | 3.74e-53 | 5 |
cartilage element | 3.74e-53 | 5 |
post-cranial axial skeletal system | 3.74e-53 | 5 |
vertebral column | 3.74e-53 | 5 |
intervertebral disk | 3.74e-53 | 5 |
intervertebral joint | 3.74e-53 | 5 |
annulus fibrosus | 7.05e-34 | 2 |
fibrocartilage | 7.05e-34 | 2 |
annulus fibrosus disci intervertebralis | 7.05e-34 | 2 |
articulation | 9.08e-34 | 8 |
skeletal joint | 9.08e-34 | 8 |
articular system | 9.08e-34 | 8 |
nucleus pulposus | 3.27e-23 | 3 |
axial mesoderm | 3.27e-23 | 3 |
notochord | 3.27e-23 | 3 |
chordamesoderm | 3.27e-23 | 3 |
cartilage tissue | 4.09e-23 | 3 |
skeletal tissue | 4.09e-23 | 3 |
subdivision of skeletal system | 1.51e-17 | 16 |