FFCP PHASE1:Hg19::chr14:57268655..57268674,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:57268655..57268674,- | |||
|description=CAGE_peak_at_chr14:57268655..57268674,- | |description=CAGE_peak_at_chr14:57268655..57268674,- | ||
|id=chr14:57268655..57268674,- | |id=chr14:57268655..57268674,- | ||
|ontology_enrichment_celltype=CL:0002322!9.53e-29!5;CL:0000540!2.87e-14!6;CL:0000031!2.87e-14!6;CL:0000404!2.87e-14!6;CL:0000047!7.69e-11!8;CL:0000133!1.63e-08!59;CL:0002319!2.09e-08!25;CL:0000221!6.00e-07!71 | |ontology_enrichment_celltype=CL:0002322!9.53e-29!5;CL:0000540!2.87e-14!6;CL:0000031!2.87e-14!6;CL:0000404!2.87e-14!6;CL:0000047!7.69e-11!8;CL:0000133!1.63e-08!59;CL:0002319!2.09e-08!25;CL:0000221!6.00e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002586;3.27e-23;3!CL:0000149;8.69e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.09e-23,3;CL:0000149,1.03e-17,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;8.69e-18;4!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.89e-08!5;UBERON:0005388!1.89e-08!5;UBERON:0001802!1.89e-08!5;UBERON:0005743!3.69e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;3.27e-23;3!UBERON:0001782;3.27e-23;3!UBERON:0000966;1.60e-14;5!UBERON:0005388;1.60e-14;5!UBERON:0001802;1.60e-14;5!UBERON:0007625;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,4.09e-23,3;UBERON:0005424,4.09e-23,3;UBERON:0001781,1.03e-17,4;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0007625,2.63e-07,11 | |||
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|short_description=p@chr14:57268655..57268674,- | |short_description=p@chr14:57268655..57268674,- | ||
}} | }} |
Latest revision as of 21:21, 24 July 2015
Short description: | p@chr14:57268655..57268674, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:57268655..57268674, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 4.09e-23 | 3 |
visual pigment cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 4.09e-23 | 3 |
presumptive retinal pigmented epithelium | 4.09e-23 | 3 |
layer of retina | 1.03e-17 | 4 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
pigment epithelium of eye | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |