FFCP PHASE1:Hg19::chr14:60981789..60981803,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000557618_5end | |association_with_transcript=-33bp_to_ENST00000557618_5end | ||
|cluster_id=chr14:60981789..60981803,+ | |||
|description=CAGE_peak_1_at_ENST00000557618_5end | |description=CAGE_peak_1_at_ENST00000557618_5end | ||
|id=chr14:60981789..60981803,+ | |id=chr14:60981789..60981803,+ | ||
|ontology_enrichment_celltype=CL:0000064;7.22e-55;3!CL:0000067;7.22e-55;3!CL:0005012;7.22e-55;3!CL:0002304;7.22e-55;3!CL:0000075;6.93e-24;27!CL:0000710;1.19e-22;20!CL:0002322;2.70e-15;5!CL:0002077;1.05e-12;34!CL:0002535;2.72e-10;2!CL:0000148;4.04e-08;10 | |ontology_enrichment_celltype=CL:0002322!2.02e-17!5;CL:0000075!3.48e-16!27;CL:0000710!1.59e-15!20;CL:0000188!1.00e-12!9;CL:0000064!4.13e-12!3;CL:0005012!4.13e-12!3;CL:0000067!4.13e-12!3;CL:0002304!4.13e-12!3;CL:0000133!4.18e-12!59;CL:0000594!1.44e-10!3;CL:0002077!2.13e-10!33;CL:0000221!1.85e-09!71;CL:0000148!2.05e-08!10;CL:0000541!2.05e-08!10;CL:0000147!2.91e-08!14;CL:0000325!5.35e-07!39 | ||
| | |ontology_enrichment_celltype_v019=CL:0000064;7.22e-55;3!CL:0000067;7.22e-55;3!CL:0005012;7.22e-55;3!CL:0002304;7.22e-55;3!CL:0000075;6.93e-24;27!CL:0000710;1.19e-22;20!CL:0002322;2.70e-15;5!CL:0002077;1.05e-12;34!CL:0002535;2.72e-10;2!CL:0000148;4.04e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.25e-54,3;CL:0000067,1.25e-54,3;CL:0005012,1.25e-54,3;CL:0002304,1.25e-54,3;CL:0000075,6.40e-24,27;CL:0000710,1.24e-22,20;CL:0002322,2.34e-15,5;CL:0002077,2.22e-13,34;CL:0002535,2.49e-10,2;CL:0000148,3.76e-08,10;CL:0000541,3.76e-08,10;CL:0000133,1.76e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001778;7.22e-55;3!UBERON:0001775;7.22e-55;3!UBERON:0000488;2.20e-41;4!UBERON:0002203;7.09e-28;6!UBERON:0001768;7.09e-28;6!UBERON:0002200;7.09e-28;6!UBERON:0007625;1.20e-26;11!UBERON:0001801;4.85e-21;14!UBERON:0000019;1.29e-15;19!UBERON:0000047;1.29e-15;19!UBERON:0004088;1.29e-15;19!UBERON:0010230;1.29e-15;19!UBERON:0006876;1.52e-15;11!UBERON:0000970;7.42e-15;20!UBERON:0002104;3.63e-14;21!UBERON:0001456;3.63e-14;21!UBERON:0000020;5.74e-13;23!UBERON:0001032;1.92e-12;24!UBERON:0004456;1.92e-12;24!UBERON:0000007;1.57e-10;2!UBERON:0006955;2.72e-10;2!UBERON:0004801;2.72e-10;2!UBERON:0010371;1.27e-09;31 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!3.91e-15!4;UBERON:0001778!4.13e-12!3;UBERON:0001775!4.13e-12!3;UBERON:0007625!1.39e-11!11;UBERON:0000020!3.87e-11!23;UBERON:0001032!1.34e-10!24;UBERON:0004456!1.34e-10!24;UBERON:0000970!1.83e-10!20;UBERON:0002203!4.35e-10!6;UBERON:0001768!4.35e-10!6;UBERON:0002104!6.78e-10!21;UBERON:0001801!6.18e-09!14;UBERON:0000019!1.61e-08!19;UBERON:0000047!1.61e-08!19;UBERON:0004088!1.61e-08!19;UBERON:0003072!1.61e-08!19;UBERON:0003071!1.61e-08!19;UBERON:0004128!1.61e-08!19;UBERON:0000007!1.84e-08!2;UBERON:0000341!5.70e-08!2;UBERON:0001456!1.32e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;7.22e-55;3!UBERON:0001775;7.22e-55;3!UBERON:0000488;2.20e-41;4!UBERON:0002203;7.09e-28;6!UBERON:0001768;7.09e-28;6!UBERON:0002200;7.09e-28;6!UBERON:0007625;1.20e-26;11!UBERON:0001801;4.85e-21;14!UBERON:0000019;1.29e-15;19!UBERON:0000047;1.29e-15;19!UBERON:0004088;1.29e-15;19!UBERON:0010230;1.29e-15;19!UBERON:0006876;1.52e-15;11!UBERON:0000970;7.42e-15;20!UBERON:0002104;3.63e-14;21!UBERON:0001456;3.63e-14;21!UBERON:0000020;5.74e-13;23!UBERON:0001032;1.92e-12;24!UBERON:0004456;1.92e-12;24!UBERON:0000007;1.57e-10;2!UBERON:0006955;2.72e-10;2!UBERON:0004801;2.72e-10;2!UBERON:0010371;1.27e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.25e-54,3;UBERON:0001775,1.25e-54,3;UBERON:0000488,3.33e-41,4;UBERON:0002203,9.34e-28,6;UBERON:0001768,9.34e-28,6;UBERON:0002200,9.34e-28,6;UBERON:0007625,1.20e-26,11;UBERON:0001801,4.85e-21,14;UBERON:0006876,1.76e-15,11;UBERON:0000019,7.42e-15,20;UBERON:0000047,7.42e-15,20;UBERON:0010312,7.42e-15,20;UBERON:0004088,7.42e-15,20;UBERON:0010230,7.42e-15,20;UBERON:0003072,7.42e-15,20;UBERON:0004128,7.42e-15,20;UBERON:0003071,7.42e-15,20;UBERON:0000970,3.63e-14,21;UBERON:0002104,3.63e-14,21;UBERON:0001456,1.54e-13,22;UBERON:0000020,1.93e-12,24;UBERON:0001032,1.93e-12,24;UBERON:0004456,1.93e-12,24;UBERON:0000007,1.43e-10,2;UBERON:0006955,2.49e-10,2;UBERON:0004801,2.49e-10,2;UBERON:0005085,1.05e-09,31;UBERON:0003056,2.08e-07,61 | |||
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| ||
|short_description=p1@ENST00000557618 | |short_description=p1@ENST00000557618 | ||
}} | }} |
Latest revision as of 21:34, 24 July 2015
Short description: | p1@ENST00000557618 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000557618_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_ENST00000557618_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.25e-54 | 3 |
ciliated epithelial cell | 1.25e-54 | 3 |
multi-ciliated epithelial cell | 1.25e-54 | 3 |
non-pigmented ciliary epithelial cell | 1.25e-54 | 3 |
columnar/cuboidal epithelial cell | 6.40e-24 | 27 |
neurecto-epithelial cell | 1.24e-22 | 20 |
embryonic stem cell | 2.34e-15 | 5 |
ecto-epithelial cell | 2.22e-13 | 34 |
epithelial cell of cervix | 2.49e-10 | 2 |
melanocyte | 3.76e-08 | 10 |
melanoblast | 3.76e-08 | 10 |
neurectodermal cell | 1.76e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.25e-54 | 3 |
ciliary body | 1.25e-54 | 3 |
atypical epithelium | 3.33e-41 | 4 |
vasculature of eye | 9.34e-28 | 6 |
uvea | 9.34e-28 | 6 |
vasculature of head | 9.34e-28 | 6 |
pigment epithelium of eye | 1.20e-26 | 11 |
anterior segment of eyeball | 4.85e-21 | 14 |
vasculature of organ | 1.76e-15 | 11 |
camera-type eye | 7.42e-15 | 20 |
simple eye | 7.42e-15 | 20 |
immature eye | 7.42e-15 | 20 |
ocular region | 7.42e-15 | 20 |
eyeball of camera-type eye | 7.42e-15 | 20 |
optic cup | 7.42e-15 | 20 |
optic vesicle | 7.42e-15 | 20 |
eye primordium | 7.42e-15 | 20 |
eye | 3.63e-14 | 21 |
visual system | 3.63e-14 | 21 |
face | 1.54e-13 | 22 |
sense organ | 1.93e-12 | 24 |
sensory system | 1.93e-12 | 24 |
entire sense organ system | 1.93e-12 | 24 |
pituitary gland | 1.43e-10 | 2 |
uterine epithelium | 2.49e-10 | 2 |
cervix epithelium | 2.49e-10 | 2 |
ectodermal placode | 1.05e-09 | 31 |
pre-chordal neural plate | 2.08e-07 | 61 |