FFCP PHASE1:Hg19::chr14:95080974..95080983,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:95080974..95080983,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr14:95080974..95080983,- | |description=CAGE_peak_at_chr14:95080974..95080983,- | ||
|id=chr14:95080974..95080983,- | |id=chr14:95080974..95080983,- | ||
|ontology_enrichment_celltype=CL:0000181!3.53e-12!12;CL:0000417!3.53e-12!12;CL:0000668!3.53e-12!12;CL:0000414!3.53e-12!12;CL:0000412!3.53e-12!12;CL:0000182!3.53e-12!12;CL:0000746!4.67e-09!3;CL:0000513!4.67e-09!3;CL:0002379!4.31e-07!1;CL:0000737!5.46e-07!4 | |ontology_enrichment_celltype=CL:0000181!3.53e-12!12;CL:0000417!3.53e-12!12;CL:0000668!3.53e-12!12;CL:0000414!3.53e-12!12;CL:0000412!3.53e-12!12;CL:0000182!3.53e-12!12;CL:0000746!4.67e-09!3;CL:0000513!4.67e-09!3;CL:0002379!4.31e-07!1;CL:0000737!5.46e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000746;5.61e-30;3!CL:0000737;8.96e-23;4!CL:0000182;2.20e-17;12!CL:0002549;3.24e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,4.84e-30,3;CL:0000513,4.84e-30,3;CL:0000737,8.02e-23,4;CL:0000182,2.20e-17,12;CL:0002549,3.24e-12,2 | |||
|ontology_enrichment_development_v019=CL:0000513;5.61e-30;3!UBERON:0004161;5.00e-09;11!UBERON:0009497;8.89e-08;13 | |||
|ontology_enrichment_disease=DOID:3620!4.31e-07!1;DOID:3565!4.31e-07!1;DOID:5662!5.14e-07!1 | |ontology_enrichment_disease=DOID:3620!4.31e-07!1;DOID:3565!4.31e-07!1;DOID:5662!5.14e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.47e-14!19;UBERON:0006925!1.47e-14!19;UBERON:0008836!1.47e-14!19;UBERON:0008835!1.90e-12!22;UBERON:0003894!1.90e-12!22;UBERON:0009854!7.23e-12!23;UBERON:0007499!7.63e-11!25;UBERON:0009497!7.63e-11!25;UBERON:0000015!7.63e-11!25;UBERON:0002423!7.63e-11!25;UBERON:0006235!7.63e-11!25;UBERON:0004161!7.63e-11!25;UBERON:0005057!2.16e-10!26;UBERON:0009856!2.16e-10!26;UBERON:0002368!1.37e-09!35;UBERON:0002300!5.69e-09!3;UBERON:0006331!8.41e-09!3;UBERON:0002365!1.44e-08!31;UBERON:0002330!1.44e-08!31;UBERON:0002084!2.52e-07!1;UBERON:0002082!2.52e-07!1;UBERON:0004706!2.52e-07!1;UBERON:0001048!2.54e-07!168;UBERON:0007029!3.20e-07!1;UBERON:0000949!3.42e-07!45;UBERON:0002038!3.82e-07!1;UBERON:0009661!3.82e-07!1;UBERON:0002363!4.85e-07!1;UBERON:0007647!4.85e-07!1;UBERON:0010115!4.85e-07!1;UBERON:0002298!5.17e-07!8;UBERON:0007023!7.50e-07!115 | |ontology_enrichment_uberon=UBERON:0002107!1.47e-14!19;UBERON:0006925!1.47e-14!19;UBERON:0008836!1.47e-14!19;UBERON:0008835!1.90e-12!22;UBERON:0003894!1.90e-12!22;UBERON:0009854!7.23e-12!23;UBERON:0007499!7.63e-11!25;UBERON:0009497!7.63e-11!25;UBERON:0000015!7.63e-11!25;UBERON:0002423!7.63e-11!25;UBERON:0006235!7.63e-11!25;UBERON:0004161!7.63e-11!25;UBERON:0005057!2.16e-10!26;UBERON:0009856!2.16e-10!26;UBERON:0002368!1.37e-09!35;UBERON:0002300!5.69e-09!3;UBERON:0006331!8.41e-09!3;UBERON:0002365!1.44e-08!31;UBERON:0002330!1.44e-08!31;UBERON:0002084!2.52e-07!1;UBERON:0002082!2.52e-07!1;UBERON:0004706!2.52e-07!1;UBERON:0001048!2.54e-07!168;UBERON:0007029!3.20e-07!1;UBERON:0000949!3.42e-07!45;UBERON:0002038!3.82e-07!1;UBERON:0009661!3.82e-07!1;UBERON:0002363!4.85e-07!1;UBERON:0007647!4.85e-07!1;UBERON:0010115!4.85e-07!1;UBERON:0002298!5.17e-07!8;UBERON:0007023!7.50e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.54e-29;19!UBERON:0006925;2.54e-29;19!UBERON:0002423;2.28e-22;25!UBERON:0002365;4.77e-18;31!UBERON:0002330;4.77e-18;31!UBERON:0002368;1.23e-15;33!UBERON:0005629;3.24e-12;2!UBERON:0005358;3.24e-12;2!UBERON:0001886;3.24e-12;2!UBERON:0004086;3.24e-12;2!UBERON:0005282;3.24e-12;2!UBERON:0005281;3.24e-12;2!UBERON:0000949;2.26e-11;43!UBERON:0005172;3.03e-08;52!UBERON:0005173;3.03e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.54e-29,19;UBERON:0006925,2.54e-29,19;UBERON:0008836,2.54e-29,19;UBERON:0008835,2.26e-25,22;UBERON:0003894,2.26e-25,22;UBERON:0009854,2.76e-24,23;UBERON:0007499,2.28e-22,25;UBERON:0009497,2.28e-22,25;UBERON:0000015,2.28e-22,25;UBERON:0002423,2.28e-22,25;UBERON:0006235,2.28e-22,25;UBERON:0004161,2.28e-22,25;UBERON:0009856,1.61e-21,26;UBERON:0002365,4.26e-18,31;UBERON:0002330,4.26e-18,31;UBERON:0002368,4.66e-16,35;UBERON:0000949,1.54e-12,45;UBERON:0005629,3.24e-12,2;UBERON:0005358,3.24e-12,2;UBERON:0001886,3.24e-12,2;UBERON:0004086,3.24e-12,2;UBERON:0005282,3.24e-12,2;UBERON:0005281,3.24e-12,2;UBERON:0003929,1.77e-10,54;UBERON:0005172,1.77e-10,54;UBERON:0005173,1.77e-10,54;UBERON:0002530,1.33e-09,59;UBERON:0002417,1.92e-09,60;UBERON:0000916,1.92e-09,60;UBERON:0003914,3.86e-09,117;UBERON:0005256,9.32e-09,122;UBERON:0000490,3.55e-07,148;UBERON:0005911,6.18e-07,82 | |||
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|short_description=p@chr14:95080974..95080983,- | |short_description=p@chr14:95080974..95080983,- | ||
}} | }} |
Latest revision as of 00:02, 25 July 2015
Short description: | p@chr14:95080974..95080983, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:95080974..95080983, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 4.84e-30 | 3 |
cardiac muscle myoblast | 4.84e-30 | 3 |
striated muscle cell | 8.02e-23 | 4 |
hepatocyte | 2.20e-17 | 12 |
fibroblast of choroid plexus | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 2.54e-29 | 19 |
digestive gland | 2.54e-29 | 19 |
liver bud | 2.54e-29 | 19 |
hepatic diverticulum | 2.26e-25 | 22 |
liver primordium | 2.26e-25 | 22 |
digestive tract diverticulum | 2.76e-24 | 23 |
epithelial sac | 2.28e-22 | 25 |
epithelium of foregut-midgut junction | 2.28e-22 | 25 |
anatomical boundary | 2.28e-22 | 25 |
hepatobiliary system | 2.28e-22 | 25 |
foregut-midgut junction | 2.28e-22 | 25 |
septum transversum | 2.28e-22 | 25 |
sac | 1.61e-21 | 26 |
exocrine gland | 4.26e-18 | 31 |
exocrine system | 4.26e-18 | 31 |
endocrine gland | 4.66e-16 | 35 |
endocrine system | 1.54e-12 | 45 |
vascular plexus | 3.24e-12 | 2 |
ventricle of nervous system | 3.24e-12 | 2 |
choroid plexus | 3.24e-12 | 2 |
brain ventricle | 3.24e-12 | 2 |
ventricular system of brain | 3.24e-12 | 2 |
ventricular system of central nervous system | 3.24e-12 | 2 |
gut epithelium | 1.77e-10 | 54 |
abdomen element | 1.77e-10 | 54 |
abdominal segment element | 1.77e-10 | 54 |
gland | 1.33e-09 | 59 |
abdominal segment of trunk | 1.92e-09 | 60 |
abdomen | 1.92e-09 | 60 |
epithelial tube | 3.86e-09 | 117 |
trunk mesenchyme | 9.32e-09 | 122 |
unilaminar epithelium | 3.55e-07 | 148 |
endo-epithelium | 6.18e-07 | 82 |