FFCP PHASE1:Hg19::chr15:39488203..39488219,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:39488203..39488219,-
|short_description=p@chr15:39488203..39488219,-
|description=CAGE_peak_at_chr15:39488203..39488219,-
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39488203..39488219,- | |||
|description=CAGE_peak_at_chr15:39488203..39488219,- | |||
|id=chr15:39488203..39488219,- | |||
|ontology_enrichment_celltype=CL:0000057!4.56e-13!75;CL:0000548!7.68e-12!679;CL:0000004!7.68e-12!679;CL:0000255!7.68e-12!679;CL:0000012!1.36e-11!682;CL:0000144!1.33e-10!625;CL:0000055!1.80e-10!180;CL:0002620!1.89e-10!23;CL:0002371!4.03e-10!591;CL:0000220!7.86e-10!246;CL:0002321!1.35e-09!248;CL:0000003!1.72e-08!722;CL:0000066!6.18e-08!254;CL:0000197!8.96e-08!6;CL:0000098!8.96e-08!6;CL:0002167!8.96e-08!6;CL:0000063!3.05e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.73e-18;23!CL:0002166;2.35e-10;3!CL:0002580;5.85e-10;3!CL:0002621;3.00e-09;3!CL:0002334;2.96e-08;12!CL:0000197;6.83e-08;6!CL:0000098;6.83e-08;6!CL:0002167;6.83e-08;6!CL:0000057;1.73e-07;73!CL:0002159;3.69e-07;14!CL:0002617;5.33e-07;2!CL:0002327;5.93e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.23e-18,23;CL:0000057,2.08e-15,76;CL:0002166,2.29e-10,3;CL:0002580,5.46e-10,3;CL:0002621,3.56e-09,3;CL:0002334,3.20e-08,12;CL:0000197,6.73e-08,6;CL:0000098,6.73e-08,6;CL:0002167,6.73e-08,6;CL:0002159,4.24e-07,14;CL:0002617,5.34e-07,2;CL:0002327,6.73e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.31e-07!5;DOID:450!2.31e-07!5;DOID:66!2.31e-07!5;DOID:423!2.31e-07!5;DOID:0080000!2.31e-07!5;DOID:11722!2.31e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;6.53e-10;5!DOID:450;6.53e-10;5!DOID:66;6.53e-10;5!DOID:423;6.53e-10;5!DOID:0080000;6.53e-10;5!DOID:11722;6.53e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.92e-10,5;DOID:450,5.92e-10,5;DOID:66,5.92e-10,5;DOID:423,5.92e-10,5;DOID:0080000,5.92e-10,5;DOID:11722,5.92e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.16e-12!40;UBERON:0002199!3.35e-10!45;UBERON:0002416!3.35e-10!45;UBERON:0005631!1.11e-09!14;UBERON:0000158!1.11e-09!14;UBERON:0001637!2.86e-08!42;UBERON:0003509!2.86e-08!42;UBERON:0004572!2.86e-08!42;UBERON:0004923!2.94e-08!57;UBERON:0003688!5.72e-08!6;UBERON:0002358!5.72e-08!6;UBERON:0003684!5.72e-08!6;UBERON:0001178!5.72e-08!6;UBERON:0003102!5.74e-08!95;UBERON:0001981!6.14e-08!60;UBERON:0007500!6.14e-08!60;UBERON:0004537!6.14e-08!60;UBERON:0006965!6.14e-08!60;UBERON:0004573!1.96e-07!33;UBERON:0004571!1.96e-07!33;UBERON:0004872!3.27e-07!84;UBERON:0000055!3.63e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.57e-16;41!UBERON:0002199;1.67e-12;46!UBERON:0002416;1.67e-12;46!UBERON:0001949;3.00e-09;3!UBERON:0003102;4.91e-09;50!UBERON:0001708;7.71e-08;4!UBERON:0008895;7.71e-08;4!UBERON:0003688;1.02e-07;6!UBERON:0002358;1.02e-07;6!UBERON:0003684;1.02e-07;6!UBERON:0001178;1.02e-07;6!UBERON:0000310;2.05e-07;10!UBERON:0001911;5.93e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.29e-20,41;UBERON:0002199,1.83e-17,46;UBERON:0002416,1.83e-17,46;UBERON:0003102,8.29e-13,99;UBERON:0001949,3.56e-09,3;UBERON:0001708,7.56e-08,4;UBERON:0008895,7.56e-08,4;UBERON:0003688,1.12e-07,6;UBERON:0002358,1.12e-07,6;UBERON:0003684,1.12e-07,6;UBERON:0001178,1.12e-07,6;UBERON:0000310,1.99e-07,10;UBERON:0001911,6.73e-07,4;UBERON:0005333,6.73e-07,4;UBERON:0008425,6.73e-07,4;UBERON:0005311,6.73e-07,4 | |||
|phase1_expression=4.36028110249336,2.14100523890983,1.69145284915165,2.00146596706261,0.446961094427288,0,0,0,0,0.491467873003018,0.697801167972428,1.52908960491121,0.263766978228454,0,0,0,3.61616716814386,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,1.49091585508596,1.64619665163954,7.54732330635347,0.573673241497627,0.354668382198357,0,2.1349799145941,1.97334038733728,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0.831192346452549,0,0,0.150238058906597,0.113432183160021,6.99619579186562,4.69826255400848,2.11931901159562,0.300091096084402,2.16410311400722,3.86460810068444,2.60563598864226,1.35021065793013,2.04617710838517,1.51460264546469,1.65689817556139,0.646584227275248,2.84007674013291,2.61955455391865,1.69560592310488,1.54608682530637,4.09119180886252,2.00763216772303,0,0,0,0,0,0,4.69348596989448,1.28648187638577,0,2.3218396401599,0,0,0,0.241011029883482,0.220587945464788,0,0,0,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0,3.40225884766739,0,1.10581869652794,0.370353780634118,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,4.68669169933885,9.40699917913613,9.21538132075512,3.04498977189684,2.03443756959773,1.53353071666084,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.718874566474748,0,0,2.02693829334611,0,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45579603071565,3.7470087647404,2.05013139544115,3.86566669475954,0.300946099727719,0,0,0,0,0.695068915744663,0,0,0,0,0,1.81876542867756,1.66435439510497,0.907170879989041,6.69891081110698,7.366174717827,2.52594084989766,1.40953064181271,7.67560873600055,0.804269605718038,1.48418066444991,0,0,0,0,0,0,4.41114234667227,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,3.14041339185858,0.768760269460425,12.5060458244692,0.30347334256665,0,0.62962469366128,0.6970372701606,0,0.532306030317022,0,1.11194531462352,0.429374660225974,0,0,0,0,0,0,0,0.359744915166629,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,2.02910376962704,1.8589409885985,0,0.143411352204052,0.0982490410131212,1.426684205925,0,0,0,0,0,0.962221127255121,2.68120910214315,0,0,1.72202149068492,0,0.886860307073351,8.04031900724358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,0,4.0435146396035,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0.326587360109409,1.19730191562487,0,3.40776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0,1.60011105865261,0.343395705182793,0,1.26184898228651,0,0,0,0.906823702049089,0.926089897295336,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=4.36028110249336,2.14100523890983,1.69145284915165,2.00146596706261,0.446961094427288,0,0,0,0,0.491467873003018,0.697801167972428,1.52908960491121,0.263766978228454,0,0,0,3.61616716814386,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,1.49091585508596,1.64619665163954,7.54732330635347,0.573673241497627,0.354668382198357,0,2.1349799145941,1.97334038733728,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0.831192346452549,0,0,0.150238058906597,0.113432183160021,6.99619579186562,4.69826255400848,2.11931901159562,0.300091096084402,2.16410311400722,3.86460810068444,2.60563598864226,1.35021065793013,2.04617710838517,1.51460264546469,1.65689817556139,0.646584227275248,2.84007674013291,2.61955455391865,1.69560592310488,1.54608682530637,4.09119180886252,2.00763216772303,0,0,0,0,0,0,4.69348596989448,1.28648187638577,0,2.3218396401599,0,0,0,0.241011029883482,0.220587945464788,0,0,0,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0,3.40225884766739,0,1.10581869652794,0.370353780634118,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,4.68669169933885,9.40699917913613,9.21538132075512,3.04498977189684,2.03443756959773,1.53353071666084,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.718874566474748,0,0,2.02693829334611,0,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45579603071565,3.7470087647404,2.05013139544115,3.86566669475954,0.300946099727719,0,0,0,0,0.695068915744663,0,0,0,0,0,1.81876542867756,1.66435439510497,0.907170879989041,6.69891081110698,7.366174717827,2.52594084989766,1.40953064181271,7.67560873600055,0.804269605718038,1.48418066444991,0,0,0,0,0,0,4.41114234667227,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,3.14041339185858,0.768760269460425,12.5060458244692,0.30347334256665,0,0.62962469366128,0.6970372701606,0,0.532306030317022,0,1.11194531462352,0.429374660225974,0,0,0,0,0,0,0,0.359744915166629,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,2.02910376962704,1.8589409885985,0,0.143411352204052,0.0982490410131212,1.426684205925,0,0,0,0,0,0.962221127255121,2.68120910214315,0,0,1.72202149068492,0,0.886860307073351,8.04031900724358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,0,4.0435146396035,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0.326587360109409,1.19730191562487,0,3.40776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0,1.60011105865261,0.343395705182793,0,1.26184898228651,0,0,0,0.906823702049089,0.926089897295336,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:39488203..39488219,- | |||
}} | }} |
Latest revision as of 01:09, 25 July 2015
Short description: | p@chr15:39488203..39488219, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39488203..39488219, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.23e-18 | 23 |
fibroblast | 2.08e-15 | 76 |
epithelial cell of Malassez | 2.29e-10 | 3 |
preadipocyte of the breast | 5.46e-10 | 3 |
gingival epithelial cell | 3.56e-09 | 3 |
preadipocyte | 3.20e-08 | 12 |
receptor cell | 6.73e-08 | 6 |
sensory epithelial cell | 6.73e-08 | 6 |
olfactory epithelial cell | 6.73e-08 | 6 |
general ecto-epithelial cell | 4.24e-07 | 14 |
adipocyte of breast | 5.34e-07 | 2 |
mammary gland epithelial cell | 6.73e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.29e-20 | 41 |
integument | 1.83e-17 | 46 |
integumental system | 1.83e-17 | 46 |
surface structure | 8.29e-13 | 99 |
gingival epithelium | 3.56e-09 | 3 |
jaw skeleton | 7.56e-08 | 4 |
splanchnocranium | 7.56e-08 | 4 |
omentum | 1.12e-07 | 6 |
peritoneum | 1.12e-07 | 6 |
abdominal cavity | 1.12e-07 | 6 |
visceral peritoneum | 1.12e-07 | 6 |
breast | 1.99e-07 | 10 |
mammary gland | 6.73e-07 | 4 |
mammary bud | 6.73e-07 | 4 |
mammary ridge | 6.73e-07 | 4 |
mammary placode | 6.73e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.92e-10 | 5 |
myotonic disease | 5.92e-10 | 5 |
muscle tissue disease | 5.92e-10 | 5 |
myopathy | 5.92e-10 | 5 |
muscular disease | 5.92e-10 | 5 |
myotonic dystrophy | 5.92e-10 | 5 |