FFCP PHASE1:Hg19::chr15:39880843..39880887,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39880843..39880887,- | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39880843..39880887,- | |description=CAGE_peak_at_chr15:39880843..39880887,- | ||
|id=chr15:39880843..39880887,- | |id=chr15:39880843..39880887,- | ||
|ontology_enrichment_celltype=CL:0000055!6.58e-19!180;CL:0002371!1.21e-16!591;CL:0000057!2.09e-15!75;CL:0000144!1.47e-14!625;CL:0000548!6.47e-13!679;CL:0000004!6.47e-13!679;CL:0000255!6.47e-13!679;CL:0000012!8.39e-13!682;CL:0000222!2.50e-10!119;CL:0002334!1.79e-08!12;CL:0002139!5.56e-08!24;CL:0000003!5.93e-08!722;CL:0000220!1.37e-07!246;CL:0000723!1.56e-07!436;CL:0000680!2.02e-07!57;CL:0000056!2.02e-07!57;CL:0000355!2.02e-07!57;CL:0002321!2.72e-07!248;CL:0000048!4.72e-07!430;CL:0000034!5.49e-07!444 | |ontology_enrichment_celltype=CL:0000055!6.58e-19!180;CL:0002371!1.21e-16!591;CL:0000057!2.09e-15!75;CL:0000144!1.47e-14!625;CL:0000548!6.47e-13!679;CL:0000004!6.47e-13!679;CL:0000255!6.47e-13!679;CL:0000012!8.39e-13!682;CL:0000222!2.50e-10!119;CL:0002334!1.79e-08!12;CL:0002139!5.56e-08!24;CL:0000003!5.93e-08!722;CL:0000220!1.37e-07!246;CL:0000723!1.56e-07!436;CL:0000680!2.02e-07!57;CL:0000056!2.02e-07!57;CL:0000355!2.02e-07!57;CL:0002321!2.72e-07!248;CL:0000048!4.72e-07!430;CL:0000034!5.49e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.76e-10;12!CL:0002139;9.35e-09;24!CL:0002620;3.61e-08;23!CL:0000349;4.80e-07;19!CL:0000057;5.85e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.38e-19,76;CL:0002334,4.25e-10,12;CL:0002139,8.85e-09,24;CL:0000723,2.45e-08,433;CL:0002620,5.02e-08,23;CL:0000034,1.01e-07,441;CL:0000048,1.11e-07,427;CL:0000349,4.73e-07,19;CL:0000115,8.64e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.32e-07;5!DOID:450;3.32e-07;5!DOID:66;3.32e-07;5!DOID:423;3.32e-07;5!DOID:0080000;3.32e-07;5!DOID:11722;3.32e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.51e-07,5;DOID:450,3.51e-07,5;DOID:66,3.51e-07,5;DOID:423,3.51e-07,5;DOID:0080000,3.51e-07,5;DOID:11722,3.51e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.53e-11!84;UBERON:0000055!1.03e-10!69;UBERON:0002049!1.28e-10!79;UBERON:0007798!1.28e-10!79;UBERON:0001981!3.11e-10!60;UBERON:0007500!3.11e-10!60;UBERON:0004537!3.11e-10!60;UBERON:0006965!3.11e-10!60;UBERON:0001637!4.96e-09!42;UBERON:0003509!4.96e-09!42;UBERON:0004572!4.96e-09!42;UBERON:0000490!6.19e-09!138;UBERON:0003102!1.57e-08!95;UBERON:0000486!1.82e-08!82;UBERON:0000468!2.69e-08!659;UBERON:0004535!1.41e-07!110;UBERON:0003914!1.51e-07!118;UBERON:0000914!1.65e-07!83;UBERON:0002329!1.65e-07!83;UBERON:0003077!1.65e-07!83;UBERON:0003059!1.65e-07!83;UBERON:0007282!1.65e-07!83;UBERON:0009618!1.65e-07!83;UBERON:0007285!1.65e-07!83;UBERON:0004573!2.88e-07!33;UBERON:0004571!2.88e-07!33;UBERON:0001009!3.20e-07!113;UBERON:0004923!4.50e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.89e-08;6!UBERON:0002358;9.89e-08;6!UBERON:0003684;9.89e-08;6!UBERON:0001178;9.89e-08;6!UBERON:0002097;1.29e-07;41!UBERON:0002199;2.75e-07;46!UBERON:0002416;2.75e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.46e-10,68;UBERON:0004923,1.11e-09,66;UBERON:0003102,2.34e-09,99;UBERON:0002199,2.41e-09,46;UBERON:0002416,2.41e-09,46;UBERON:0007500,3.04e-09,59;UBERON:0001981,3.04e-09,59;UBERON:0004537,3.04e-09,59;UBERON:0006965,3.04e-09,59;UBERON:0002049,3.44e-09,78;UBERON:0007798,3.44e-09,78;UBERON:0002097,6.27e-09,41;UBERON:0004872,1.65e-08,83;UBERON:0003688,8.41e-08,6;UBERON:0002358,8.41e-08,6;UBERON:0003684,8.41e-08,6;UBERON:0001178,8.41e-08,6;UBERON:0001637,2.24e-07,42;UBERON:0003509,2.24e-07,42;UBERON:0004572,2.24e-07,42;UBERON:0004871,2.91e-07,8;UBERON:0005631,4.16e-07,14;UBERON:0000158,4.16e-07,14 | |||
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| ||
|short_description=p@chr15:39880843..39880887,- | |short_description=p@chr15:39880843..39880887,- | ||
}} | }} |
Latest revision as of 01:16, 25 July 2015
Short description: | p@chr15:39880843..39880887, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39880843..39880887, - |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.38e-19 | 76 |
preadipocyte | 4.25e-10 | 12 |
endothelial cell of vascular tree | 8.85e-09 | 24 |
somatic stem cell | 2.45e-08 | 433 |
skin fibroblast | 5.02e-08 | 23 |
stem cell | 1.01e-07 | 441 |
multi fate stem cell | 1.11e-07 | 427 |
extraembryonic cell | 4.73e-07 | 19 |
endothelial cell | 8.64e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.46e-10 | 68 |
organ component layer | 1.11e-09 | 66 |
surface structure | 2.34e-09 | 99 |
integument | 2.41e-09 | 46 |
integumental system | 2.41e-09 | 46 |
epithelial tube open at both ends | 3.04e-09 | 59 |
blood vessel | 3.04e-09 | 59 |
blood vasculature | 3.04e-09 | 59 |
vascular cord | 3.04e-09 | 59 |
vasculature | 3.44e-09 | 78 |
vascular system | 3.44e-09 | 78 |
skin of body | 6.27e-09 | 41 |
splanchnic layer of lateral plate mesoderm | 1.65e-08 | 83 |
omentum | 8.41e-08 | 6 |
peritoneum | 8.41e-08 | 6 |
abdominal cavity | 8.41e-08 | 6 |
visceral peritoneum | 8.41e-08 | 6 |
artery | 2.24e-07 | 42 |
arterial blood vessel | 2.24e-07 | 42 |
arterial system | 2.24e-07 | 42 |
somatic layer of lateral plate mesoderm | 2.91e-07 | 8 |
extraembryonic membrane | 4.16e-07 | 14 |
membranous layer | 4.16e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.51e-07 | 5 |
myotonic disease | 3.51e-07 | 5 |
muscle tissue disease | 3.51e-07 | 5 |
myopathy | 3.51e-07 | 5 |
muscular disease | 3.51e-07 | 5 |
myotonic dystrophy | 3.51e-07 | 5 |