FFCP PHASE1:Hg19::chr15:39888092..39888103,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:39888092..39888103,+
|short_description=p@chr15:39888092..39888103,+
|description=CAGE_peak_at_chr15:39888092..39888103,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39888092..39888103,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39888092..39888103,+ | |||
|id=chr15:39888092..39888103,+ | |||
|ontology_enrichment_celltype=CL:0002371!5.11e-18!591;CL:0000144!4.31e-16!625;CL:0000057!4.54e-15!75;CL:0000548!1.54e-14!679;CL:0000004!1.54e-14!679;CL:0000255!1.54e-14!679;CL:0000012!4.36e-14!682;CL:0000055!4.85e-14!180;CL:0000063!6.71e-10!578;CL:0000222!3.25e-09!119;CL:0000003!3.34e-09!722;CL:0002334!4.47e-09!12;CL:0000723!5.27e-09!436;CL:0000048!8.99e-09!430;CL:0000220!4.42e-08!246;CL:0000034!4.95e-08!444;CL:0002139!5.10e-08!24;CL:0002620!7.03e-08!23;CL:0002321!8.62e-08!248;CL:0000115!9.26e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.64e-12;23!CL:0002334;8.89e-11;12!CL:0002139;2.49e-09;24!CL:0000349;5.11e-09;19!CL:0000057;1.68e-08;73!CL:0002580;8.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.03e-23,76;CL:0002620,2.20e-12,23;CL:0002334,8.67e-11,12;CL:0000048,1.56e-09,427;CL:0002139,1.60e-09,24;CL:0000349,3.60e-09,19;CL:0000723,4.29e-09,433;CL:0000034,1.57e-08,441;CL:0000115,3.65e-07,36;CL:0002580,8.15e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.05e-08;5!DOID:450;1.05e-08;5!DOID:66;1.05e-08;5!DOID:423;1.05e-08;5!DOID:0080000;1.05e-08;5!DOID:11722;1.05e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.67e-08,5;DOID:450,1.67e-08,5;DOID:66,1.67e-08,5;DOID:423,1.67e-08,5;DOID:0080000,1.67e-08,5;DOID:11722,1.67e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.84e-13!69;UBERON:0004872!4.57e-12!84;UBERON:0001981!1.75e-11!60;UBERON:0007500!1.75e-11!60;UBERON:0004537!1.75e-11!60;UBERON:0006965!1.75e-11!60;UBERON:0002049!1.94e-11!79;UBERON:0007798!1.94e-11!79;UBERON:0003914!7.07e-10!118;UBERON:0001637!1.38e-08!42;UBERON:0003509!1.38e-08!42;UBERON:0004572!1.38e-08!42;UBERON:0004535!6.23e-08!110;UBERON:0003102!1.35e-07!95;UBERON:0005631!1.58e-07!14;UBERON:0000158!1.58e-07!14;UBERON:0000490!2.33e-07!138;UBERON:0001009!2.79e-07!113;UBERON:0002097!4.99e-07!40;UBERON:0000468!7.73e-07!659;UBERON:0002199!8.86e-07!45;UBERON:0002416!8.86e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.72e-10;6!UBERON:0002358;2.72e-10;6!UBERON:0003684;2.72e-10;6!UBERON:0001178;2.72e-10;6!UBERON:0002097;2.54e-08;41!UBERON:0000305;6.09e-08;7!UBERON:0002199;1.02e-07;46!UBERON:0002416;1.02e-07;46!UBERON:0005631;3.83e-07;10!UBERON:0000158;3.83e-07;10!UBERON:0000947;7.33e-07;21!UBERON:0010191;7.33e-07;21!UBERON:0001637;8.16e-07;42!UBERON:0003509;8.16e-07;42!UBERON:0004572;8.16e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.96e-11,46;UBERON:0002416,1.96e-11,46;UBERON:0000055,4.41e-11,68;UBERON:0002097,5.12e-11,41;UBERON:0003688,1.74e-10,6;UBERON:0002358,1.74e-10,6;UBERON:0003684,1.74e-10,6;UBERON:0001178,1.74e-10,6;UBERON:0003102,2.76e-09,99;UBERON:0002049,1.06e-08,78;UBERON:0007798,1.06e-08,78;UBERON:0007500,1.54e-08,59;UBERON:0001981,1.54e-08,59;UBERON:0004537,1.54e-08,59;UBERON:0006965,1.54e-08,59;UBERON:0001637,1.58e-08,42;UBERON:0003509,1.58e-08,42;UBERON:0004572,1.58e-08,42;UBERON:0000305,4.23e-08,7;UBERON:0004872,1.00e-07,83;UBERON:0005631,1.14e-07,14;UBERON:0000158,1.14e-07,14;UBERON:0004923,2.66e-07,66;UBERON:0004871,5.67e-07,8;UBERON:0000947,7.37e-07,21;UBERON:0010191,7.37e-07,21;UBERON:0002384,8.57e-07,371 | |||
|phase1_expression=6.17706489519893,15.6293382440418,1.55049844505568,8.00586386825043,3.5756887554183,5.23403114460221,0,0,0,0.245733936501509,0,1.52908960491121,1.58260186937072,0,0,6.05092631806598,1.20538905604795,3.65155045193687,1.95173119516203,0,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0.393364276848904,0.767658796194425,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0.601633342410425,0,0.671746422719773,0,0,0.290796477559129,0,0,0.697287110717054,0.411167888021826,0,1.43846196161075,0.256160706529101,0.236482229888585,0.689491361473237,0,0,1.50593871634084,0,0,1.22433556948361,0,0,0.329851300186716,0.199463657621632,0,5.22376629531451,0,0,3.26623264833766,0,0,1.81619850790011,0,0,0,0.212604299965044,0,0,0.600707571366025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79007586580942,0.361439152384566,1.50401373190767,1.01392563272577,0.795285947051099,1.45990461090791,0.0945348171640679,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,1.73570250803797,0,1.67799774483962,2.47606237746061,0.626984899610432,2.58416759169329,1.06729878806013,0.66944122552934,0,1.52054421143703,2.68468263302986,1.47065232138347,4.0507097394088,1.42879565254528,0,0.337834441449967,0,0.949265659568129,1.46561395144326,0,0,0.436094052142534,9.44246708221105,3.16576279161449,2.1185468930115,0.860509862246441,0,0.560677600142307,3.20246987189115,4.68668341992604,0,0.404132016209064,0.653847612453835,0,0,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0.122834317311768,0,7.12801714369232,4.69807165629258,0,0,0,0,0.277064115484183,2.19488810440419,4.59731693698529,1.80285670687916,1.13432183160021,7.17558542755448,3.84403299873421,3.17897851739343,1.20036438433761,2.06105058476878,2.06112432036503,1.67505170698431,3.71307930930786,1.46155507741798,1.51460264546469,2.30124746605748,1.93975268182574,3.90510551768276,1.81353776809752,2.88253006927829,0.386521706326594,1.63647672354501,0.573609190778008,0,0,0,0,0,0,3.12899064659632,16.0810234548221,0,4.17931135228781,2.16563844500876,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0,0,0.269662616320329,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.603173834469785,0.648119116109707,0,2.07986957055916,0,0.115930404975077,0.117408694235822,1.58803092537181,3.70388410061289,3.80508304469197,0.790204397959275,0,0,0,0,0.93733833986777,1.00789276919316,0.850650583454319,1.16426079513703,0.581267877027924,2.30029607499127,0,0,0,0,0,0.063497894292169,0,0,0,0.308482478109971,0,0,0.112131084345361,0,0,0,0,0,2.92531928243358,2.08014873822732,0,0,0,0.285955987316295,0,1.64648067356154,0,0.355391948742546,0,0,0,0,0,0,0,1.67737398844108,1.14861935834114,0,0.868687840005475,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,2.99161459204025,0,0.24538298343828,0,0.813795071099207,4.36738809214695,8.56459146226377,4.1002627908823,3.39710103478868,1.50473049863859,0,0,0,0.553107505625109,1.56390506042549,0,0,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,5.45837177201309,14.1185015425017,14.8749850049529,1.79394808957981,5.11707249066703,10.4555048743345,4.45254199334973,2.31314540703983,1.06537035187876,0.164254312027618,0.519254429183621,0.813472649219715,0,2.40607764363942,0,0.918515585316854,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0.850468526382578,0.647747748306418,3.08454505380579,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0.107420244868274,0.435050081742686,0.0852266274161009,0.0890320356467374,0.330569830721956,0.384380134730212,2.16941611240793,0.10115778085555,0,1.5740617341532,0,0,1.06461206063404,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0,0,0,0.78494864019923,0.719489830333259,0,0.235624804691373,0.202182481573316,0,0,0,0.731140468893853,3.16950440270266,0.409499734223957,1.27264888758341,0,0.551365343546124,0.66343897524122,2.19225442626881,0.578775534266688,0,1.21746226177622,2.16876448669825,0.281695602532241,0.430234056612155,0.392996164052485,2.1400263088875,0,0.211107635297664,0,0.379473173765715,0,0.48111056362756,0,0,0.282431402330337,0.86101074534246,0,2.21715076768338,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,2.62618933211459,0.593929361665277,7.98617825458003,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.102268682502155,0,4.3545542272653,1.16828856491525,0.179021174675609,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0.569710279235006,0,0,0,0.638002319463839,2.1983422416447,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0.435296032902013,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.137041924646751,0.19871461170299,0,0,0.56111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| ||
|short_description=p@chr15:39888092..39888103,+ | |||
}} | }} |
Latest revision as of 01:21, 25 July 2015
Short description: | p@chr15:39888092..39888103, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888092..39888103, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.03e-23 | 76 |
skin fibroblast | 2.20e-12 | 23 |
preadipocyte | 8.67e-11 | 12 |
multi fate stem cell | 1.56e-09 | 427 |
endothelial cell of vascular tree | 1.60e-09 | 24 |
extraembryonic cell | 3.60e-09 | 19 |
somatic stem cell | 4.29e-09 | 433 |
stem cell | 1.57e-08 | 441 |
endothelial cell | 3.65e-07 | 36 |
preadipocyte of the breast | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 1.96e-11 | 46 |
integumental system | 1.96e-11 | 46 |
vessel | 4.41e-11 | 68 |
skin of body | 5.12e-11 | 41 |
omentum | 1.74e-10 | 6 |
peritoneum | 1.74e-10 | 6 |
abdominal cavity | 1.74e-10 | 6 |
visceral peritoneum | 1.74e-10 | 6 |
surface structure | 2.76e-09 | 99 |
vasculature | 1.06e-08 | 78 |
vascular system | 1.06e-08 | 78 |
epithelial tube open at both ends | 1.54e-08 | 59 |
blood vessel | 1.54e-08 | 59 |
blood vasculature | 1.54e-08 | 59 |
vascular cord | 1.54e-08 | 59 |
artery | 1.58e-08 | 42 |
arterial blood vessel | 1.58e-08 | 42 |
arterial system | 1.58e-08 | 42 |
amnion | 4.23e-08 | 7 |
splanchnic layer of lateral plate mesoderm | 1.00e-07 | 83 |
extraembryonic membrane | 1.14e-07 | 14 |
membranous layer | 1.14e-07 | 14 |
organ component layer | 2.66e-07 | 66 |
somatic layer of lateral plate mesoderm | 5.67e-07 | 8 |
aorta | 7.37e-07 | 21 |
aortic system | 7.37e-07 | 21 |
connective tissue | 8.57e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.67e-08 | 5 |
myotonic disease | 1.67e-08 | 5 |
muscle tissue disease | 1.67e-08 | 5 |
myopathy | 1.67e-08 | 5 |
muscular disease | 1.67e-08 | 5 |
myotonic dystrophy | 1.67e-08 | 5 |