FFCP PHASE1:Hg19::chr15:85873537..85873558,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000558365_5end | |||
|cluster_id=chr15:85873537..85873558,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_ENST00000558365_5end | |||
|id=chr15:85873537..85873558,- | |||
|ontology_enrichment_celltype=CL:0000945!1.51e-27!24;CL:0000826!1.51e-27!24;CL:0000236!9.06e-19!14;CL:0000542!1.24e-13!53;CL:0000051!1.24e-13!53;CL:0000838!7.72e-13!52;CL:0002551!1.95e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.08e-62;13!CL:0000945;2.89e-58;24!CL:0000542;1.52e-18;53!CL:0002551;6.52e-15;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.19e-58,24;CL:0000826,2.19e-58,24;CL:0000236,1.04e-57,14;CL:0000838,4.58e-25,52;CL:0000542,1.58e-24,53;CL:0000051,1.58e-24,53;CL:0002551,9.07e-15,6;CL:0002087,2.45e-09,115;CL:0002031,8.19e-09,120;CL:0000738,2.12e-07,136;CL:0000819,7.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.52e-18;53!UBERON:0001045;3.78e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;5.68e-07;1!DOID:0070004;5.68e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,5.37e-07,1;DOID:0070004,5.37e-07,1;DOID:0060073,7.57e-07,1;DOID:8675,7.57e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;5.44e-10;9!UBERON:0001154;3.78e-07;1!UBERON:0001153;3.78e-07;1!UBERON:0009854;3.78e-07;1!UBERON:0002372;5.68e-07;1!UBERON:0001961;5.68e-07;1!UBERON:0001744;5.68e-07;1!UBERON:0001042;5.68e-07;1!UBERON:0001735;5.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,6.75e-10,9;UBERON:0004016,6.75e-10,9;UBERON:0010083,6.75e-10,9;UBERON:0001154,4.01e-07,1;UBERON:0001153,4.01e-07,1;UBERON:0001045,4.01e-07,1;UBERON:0002372,6.38e-07,1;UBERON:0001961,6.38e-07,1;UBERON:0001744,6.38e-07,1;UBERON:0001735,6.38e-07,1;UBERON:0000029,7.15e-07,1;UBERON:0002426,9.51e-07,1;UBERON:0003831,9.51e-07,1;UBERON:0003898,9.51e-07,1;UBERON:0004830,9.51e-07,1;UBERON:0003830,9.51e-07,1;UBERON:0005175,9.51e-07,1;UBERON:0001774,9.51e-07,1;UBERON:0001103,9.51e-07,1;UBERON:0010084,9.51e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,4.49309763365749,0.710846162437108,0,0,0,0.217010870715852,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.839662001519,7.64594055766984,5.33705552318133,7.68114400619713,5.60554381850417,8.04653415936277,8.59358334620321,8.58648379081828,4.55370375287559,3.52342313622563,2.6759125968766,1.32171328579026,0,0,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,1.24864030732128,0.570471821544449,1.34503812496621,0.939475989150119,2.10434827678571,2.24721290723598,0.204154171254893,1.22834317311768,1.44656093646072,0,0.247266929278557,0,0,1.68336113954066,0.250237039743928,0.554128230968366,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0,0.276149695926898,0.484938170456436,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0,1.21637060255316,0.195801157462741,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.509752546090077,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.290012154876366,0.154048617114644,0,0.275673144969061,0.751941714077915,0.580066775656914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0.511795582622668,0,0,0,0.539617372749944,0,0.706874414074119,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,2.62357900818653,0,0,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,0,0.822724546172388,0,0.540031437238115,0,0,0,0,0.929015875628594,0.721346064882224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,4.42054264849836,0.251932747854276,0.102268682502155,0.738508832766417,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0,1.60515529459758,0,1.82454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.387956065953678,0,0,0.137041924646751,0,0.0633107959558787,0,0,0.213452994739353,0,0.144090417154106,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,1.9846640872478,0.395223263795889,9.13444487856719,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0.465788870628778,0.414706207840855,0,0,0,0,0,0.181848659202559,0.214821114084977,0.464033759878494,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41100971525142,0,0.184105950251841,0,0,0,0.107824811396682,0.314531883711793,0,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.345701962667338,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0.828324005113957,0.766920642832419,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.118920090777569,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,1.59772660565751,0.580120991762195,0.599646935549574,0,0,0.0802413666891683,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.426467963801962,0.23806443146374,0.129177819672012,0.248298857183432,0,0,0,0.217716747896961,0,2.22261774948139,0.286888821570705,0,0,0,0,0,0,0.488965776731466,1.62758471326295,0,1.61019034872821,1.28227396921293 | |||
|short_description=p1@ENST00000558365 | |||
}} |
Latest revision as of 05:04, 25 July 2015
Short description: | p1@ENST00000558365 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000558365_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 1bp_to_ENST00000558365_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.19e-58 | 24 |
pro-B cell | 2.19e-58 | 24 |
B cell | 1.04e-57 | 14 |
lymphoid lineage restricted progenitor cell | 4.58e-25 | 52 |
lymphocyte | 1.58e-24 | 53 |
common lymphoid progenitor | 1.58e-24 | 53 |
fibroblast of dermis | 9.07e-15 | 6 |
nongranular leukocyte | 2.45e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.19e-09 | 120 |
leukocyte | 2.12e-07 | 136 |
B-1 B cell | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dermis | 6.75e-10 | 9 |
dermatome | 6.75e-10 | 9 |
future dermis | 6.75e-10 | 9 |
vermiform appendix | 4.01e-07 | 1 |
caecum | 4.01e-07 | 1 |
midgut | 4.01e-07 | 1 |
tonsil | 6.38e-07 | 1 |
mucosa-associated lymphoid tissue | 6.38e-07 | 1 |
lymphoid tissue | 6.38e-07 | 1 |
tonsillar ring | 6.38e-07 | 1 |
lymph node | 7.15e-07 | 1 |
chest muscle | 9.51e-07 | 1 |
respiratory system muscle | 9.51e-07 | 1 |
skeletal muscle of trunk | 9.51e-07 | 1 |
respiratory system skeletal muscle | 9.51e-07 | 1 |
thoracic segment muscle | 9.51e-07 | 1 |
chest organ | 9.51e-07 | 1 |
muscle of trunk | 9.51e-07 | 1 |
diaphragm | 9.51e-07 | 1 |
future diaphragm | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 5.37e-07 | 1 |
myeloma | 5.37e-07 | 1 |
lymphatic system cancer | 7.57e-07 | 1 |
lymphosarcoma | 7.57e-07 | 1 |