FFCP PHASE1:Hg19::chr15:89381951..89381962,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:89381951..89381962,+ | |||
|coexpression_cluster_id=C243 | |coexpression_cluster_id=C243 | ||
|description=CAGE_peak_at_chr15:89381951..89381962,+ | |description=CAGE_peak_at_chr15:89381951..89381962,+ | ||
Latest revision as of 05:15, 25 July 2015
| Short description: | p@chr15:89381951..89381962, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr15:89381951..89381962, + |
| Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr15:89381951..89381962+ |
|---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| GAG secreting cell | 6.39e-64 | 9 |
| carbohydrate secreting cell | 6.39e-64 | 9 |
| chondroblast | 1.08e-49 | 6 |
| chondrocyte | 1.08e-49 | 6 |
| extracellular matrix secreting cell | 3.34e-38 | 15 |
| stromal cell | 3.06e-20 | 28 |
| synovial cell | 1.17e-16 | 3 |
| secretory cell | 1.28e-15 | 36 |
| fibroblast of periodontium | 1.13e-08 | 6 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| stratified squamous epithelium | 1.17e-16 | 3 |
| layer of synovial tissue | 1.17e-16 | 3 |
| synovial joint | 1.17e-16 | 3 |
| synovial membrane of synovial joint | 1.17e-16 | 3 |
| cavity lining | 2.61e-09 | 12 |
| serous membrane | 2.61e-09 | 12 |
| periodontium | 1.13e-08 | 6 |
| dentition | 1.13e-08 | 6 |
| skull | 1.47e-07 | 7 |
| open tracheal system trachea | 3.28e-07 | 2 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| peripheral primitive neuroectodermal tumor | 6.06e-13 | 1 |
Showing 1 to 1 of 1 entries
