FFCP PHASE1:Hg19::chr16:51670868..51670880,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:51670868..51670880,- | |||
|description=CAGE_peak_at_chr16:51670868..51670880,- | |description=CAGE_peak_at_chr16:51670868..51670880,- | ||
|id=chr16:51670868..51670880,- | |id=chr16:51670868..51670880,- | ||
|ontology_enrichment_celltype=CL:0002556!6.97e-15!6 | |ontology_enrichment_celltype=CL:0002556!6.97e-15!6 | ||
|ontology_enrichment_celltype_v019=CL:0000054;3.52e-50;2!CL:0000137;3.52e-50;2!CL:0000092;3.52e-50;2!CL:0000039;1.78e-15;7!CL:0000586;1.78e-15;7!CL:0002092;2.87e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.74e-50,2;CL:0000137,2.74e-50,2;CL:0000092,2.74e-50,2;CL:0000039,1.91e-15,7;CL:0000586,1.91e-15,7;CL:0002092,2.73e-11,10;CL:0000062,2.16e-10,11;CL:0000375,2.16e-10,11;CL:0000335,2.16e-10,11 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.87e-11;10!UBERON:0005564;2.87e-11;10!CL:0000335;2.27e-10;11 | |||
|ontology_enrichment_disease=DOID:0060085!2.95e-07!1;DOID:3165!2.95e-07!1;DOID:0060121!2.95e-07!1;DOID:2438!2.95e-07!1;DOID:4418!2.95e-07!1;DOID:5662!9.25e-07!1 | |ontology_enrichment_disease=DOID:0060085!2.95e-07!1;DOID:3165!2.95e-07!1;DOID:0060121!2.95e-07!1;DOID:2438!2.95e-07!1;DOID:4418!2.95e-07!1;DOID:5662!9.25e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.55e-98;1!DOID:3165;1.55e-98;1!DOID:0060121;1.55e-98;1!DOID:2438;1.55e-98;1!DOID:4418;1.55e-98;1!DOID:200;3.52e-50;2!DOID:4305;3.52e-50;2!DOID:0060072;6.30e-26;4!DOID:201;8.34e-18;6!DOID:0060100;8.34e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,9.37e-99,1;DOID:3165,9.37e-99,1;DOID:0060121,9.37e-99,1;DOID:2438,9.37e-99,1;DOID:4418,9.37e-99,1;DOID:200,2.74e-50,2;DOID:4305,2.74e-50,2;DOID:0060072,5.56e-26,4;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0001758!6.97e-15!6;UBERON:0003672!6.97e-15!6;UBERON:0003129!2.74e-12!11;UBERON:0000075!2.32e-10!13;UBERON:0005944!2.32e-10!13;UBERON:0004288!2.32e-10!13;UBERON:0003089!2.32e-10!13;UBERON:0000165!1.31e-08!28;UBERON:0000930!1.31e-08!28;UBERON:0003102!5.32e-07!95 | |ontology_enrichment_uberon=UBERON:0001758!6.97e-15!6;UBERON:0003672!6.97e-15!6;UBERON:0003129!2.74e-12!11;UBERON:0000075!2.32e-10!13;UBERON:0005944!2.32e-10!13;UBERON:0004288!2.32e-10!13;UBERON:0003089!2.32e-10!13;UBERON:0000165!1.31e-08!28;UBERON:0000930!1.31e-08!28;UBERON:0003102!5.32e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0000014;6.30e-26;4!UBERON:0000473;1.00e-13;8!UBERON:0003135;2.27e-10;11!UBERON:0002371;1.27e-09;12!UBERON:0001474;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,5.56e-26,4;UBERON:0000473,1.07e-13,8;UBERON:0003135,2.37e-10,11 | |||
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|short_description=p@chr16:51670868..51670880,- | |short_description=p@chr16:51670868..51670880,- | ||
}} | }} |
Latest revision as of 09:43, 25 July 2015
Short description: | p@chr16:51670868..51670880, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:51670868..51670880, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.74e-50 | 2 |
osteocyte | 2.74e-50 | 2 |
osteoclast | 2.74e-50 | 2 |
germ line cell | 1.91e-15 | 7 |
germ cell | 1.91e-15 | 7 |
bone marrow cell | 2.73e-11 | 10 |
osteoblast | 2.16e-10 | 11 |
osteoprogenitor cell | 2.16e-10 | 11 |
mesenchyme condensation cell | 2.16e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 5.56e-26 | 4 |
testis | 1.07e-13 | 8 |
male reproductive organ | 2.37e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 9.37e-99 | 1 |
skin benign neoplasm | 9.37e-99 | 1 |
integumentary system benign neoplasm | 9.37e-99 | 1 |
dermis tumor | 9.37e-99 | 1 |
cutaneous fibrous histiocytoma | 9.37e-99 | 1 |
giant cell tumor | 2.74e-50 | 2 |
bone giant cell tumor | 2.74e-50 | 2 |
benign neoplasm | 5.56e-26 | 4 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |