FFCP PHASE1:Hg19::chr16:55543919..55543922,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:55543919..55543922,+ | |||
|description=CAGE_peak_at_chr16:55543919..55543922,+ | |||
|id=chr16:55543919..55543922,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.20e-15!180;CL:0000048!2.45e-11!430;CL:0000034!6.07e-11!444;CL:0000723!6.75e-11!436;CL:0000057!5.10e-09!75;CL:0002371!1.21e-08!591;CL:0000219!6.17e-08!390;CL:0002620!9.65e-08!23;CL:0002320!1.88e-07!365;CL:0000134!2.06e-07!358;CL:0000144!5.50e-07!625;CL:0000192!5.71e-07!42;CL:0000514!5.71e-07!42;CL:0000680!6.09e-07!57;CL:0000056!6.09e-07!57;CL:0000355!6.09e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.28e-11;23!CL:0000134;1.37e-09;55!CL:0000048;1.24e-08;58!CL:0002334;1.74e-08;12!CL:0000723;2.44e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.63e-20,427;CL:0000723,2.71e-19,433;CL:0000034,2.63e-18,441;CL:0000057,1.63e-15,76;CL:0000134,1.14e-14,354;CL:0002320,7.69e-14,361;CL:0000219,5.84e-13,386;CL:0002620,4.04e-11,23;CL:0002334,1.91e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.66e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.23e-16;14!DOID:193;8.38e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.15e-16,14;DOID:193,8.50e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002204!2.23e-08!167;UBERON:0002384!1.28e-07!375;UBERON:0000486!1.54e-07!82;UBERON:0004290!1.70e-07!70;UBERON:0000914!6.30e-07!83;UBERON:0002329!6.30e-07!83;UBERON:0003077!6.30e-07!83;UBERON:0003059!6.30e-07!83;UBERON:0007282!6.30e-07!83;UBERON:0009618!6.30e-07!83;UBERON:0007285!6.30e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;3.84e-08;46!UBERON:0002416;3.84e-08;46!UBERON:0000992;7.09e-08;13!UBERON:0002118;1.43e-07;5!UBERON:0002097;8.57e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.57e-14,371;UBERON:0002199,2.27e-11,46;UBERON:0002416,2.27e-11,46;UBERON:0002097,5.30e-09,41;UBERON:0000992,7.31e-08,13;UBERON:0000926,1.04e-07,315;UBERON:0004120,1.04e-07,315;UBERON:0006603,1.04e-07,315;UBERON:0002118,1.32e-07,5;UBERON:0007524,9.73e-07,73 | |||
|phase1_expression=0.908391896352783,3.63970890614671,1.12763523276777,2.00146596706261,2.68176656656373,4.36169262050184,0,1.26343974685366,8.35794010239483,0.245733936501509,0,0,0.263766978228454,0.247532705920093,0,8.74022690387308,7.23233433628772,7.30310090387373,7.3189919818576,0.861847406537515,0.816002764977012,0.313454721478088,0.85870796139317,0.547497700291537,0.251085279189606,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0.293600439334847,1.10799081706375,1.00272223735071,2.60413044859022,0,0.32389366601898,0,0.726991193897824,1.13362783106643,1.21292030593908,0,0.411167888021826,0.929119112685311,0.575384784644301,2.0492856522328,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0.612167784741805,0,0,2.96866170168044,3.59034583718937,2.55734850319616,0.290209238628584,0,0,3.51748131359441,3.12889751052121,0.65156653411535,0.605399502633369,0,0,0.211255286311942,0.637812899895131,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,0.570025487482497,0.99458338599545,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,2.50668955317945,1.44846518960824,3.1811437882044,0.486634870302636,0.189069634328136,0.221729397462564,0.43917392846563,0.130979075497713,0,0,0,0.174129737299267,0.930705723632056,0.238490624305342,0.571994910780128,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.714397826272638,0,0.112611480483322,0,0,0.183201743930407,0,0,0,1.98788780678127,0.886413581652058,3.31022952033047,3.72887606973458,1.06400514659507,0,2.1349799145941,1.97334038733728,0,0.134710672069688,0.653847612453835,0.151357427644931,0,0,1.24864030732128,0.570471821544449,1.34503812496621,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0.413303124703062,3.56400857184616,5.68713937340681,0,0,0,0,0,0.877955241761676,1.83892677479412,8.86404547548921,0.113432183160021,2.33206526395521,2.56268866582281,1.27159140695737,3.00091096084402,1.54578793857658,1.54584324027377,1.11670113798954,4.72573730275545,2.63079913935236,2.01947019395292,1.84099797284599,1.61646056818812,2.13005755509969,0.806016785821122,1.52604533079439,0.193260853163297,0,0,0.243947412259191,0,0.348581828608555,0.10366105501537,0,0.36497735907583,4.69348596989448,7.71889125831462,0,1.85747171212792,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0.968532774145487,0.829312462163088,3.31475892859011,0.50496973370552,0,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0,0,0,0,1.42198887333556,0,0.845302752556,3.98907174877306,9.36066932202295,0,0,0.532844358032199,0.857867961948885,0.542621605391443,0,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,1.01346914667305,1.02738161275192,2.14873155887875,0,0,0,0,0.254094624222463,0,0,0,0,0,5.9832291840805,0,0.12269149171914,0,0.542530047399471,0.623912584592421,2.14114786556594,0.630809660135739,1.05427273493442,1.50473049863859,0,1.03473071292505,1.32845119707087,1.10621501125022,1.30325421702124,0.195801157462741,0.343143423810856,0,0.647142602455851,0.213455115606889,0,0,0,0.992431231275107,2.30192959932094,7.57782254969299,1.15325234330131,0,1.60853921143608,1.48418066444991,1.3878872442239,2.30830242907065,1.8067974323038,1.03850885836724,4.06736324609857,0,0.601519410909855,0.0920809889358963,1.37777337797528,1.82091168006717,3.2781103739856,0,0,0,0,0,0,0,0.431831832204279,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.773365746336976,0,0.15350367472613,0.137836572484531,0.537101224341368,0.580066775656914,0,0.712256285173899,0.165284915360978,0,0,0.10115778085555,0.929691098594572,3.77774816196768,2.0911118104818,0.308033580176089,0.532306030317022,0.869932992075073,5.5597265731176,0,0,3.48017367190598,0.762520775695299,0.255897791311334,2.1396949401696,0,0,1.61885211824983,1.09814811894422,0.471249609382746,0.404364963146632,0,2.10629228119491,0,1.46228093778771,3.16950440270266,0.818999468447914,3.39373036688911,0,1.10273068709225,1.32687795048244,0,0.578775534266688,2.62357900818653,0.405820753925408,1.54911749049875,0.281695602532241,0,0.0982490410131212,0.7133421029625,0.354761064070598,6.75544432952525,7.24448764511784,0,0,0,0.670302275535787,0,0.0941438007767792,0.86101074534246,0,0.443430153536676,0.229723400206959,0,1.52927441428475,0.569647187174163,0.714695326373367,0,0.648473311192717,0,0.79312517629427,0,0.962479855263359,0,0,0,0,0,0.199579371432817,0,0.423347165447766,0.324621940274555,0.561594356226918,0,0.47003968731907,5.0126895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| |||
|short_description=p@chr16:55543919..55543922,+ | |||
}} |
Latest revision as of 09:54, 25 July 2015
Short description: | p@chr16:55543919..55543922, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55543919..55543922, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.63e-20 | 427 |
somatic stem cell | 2.71e-19 | 433 |
stem cell | 2.63e-18 | 441 |
fibroblast | 1.63e-15 | 76 |
mesenchymal cell | 1.14e-14 | 354 |
connective tissue cell | 7.69e-14 | 361 |
motile cell | 5.84e-13 | 386 |
skin fibroblast | 4.04e-11 | 23 |
preadipocyte | 1.91e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.57e-14 | 371 |
integument | 2.27e-11 | 46 |
integumental system | 2.27e-11 | 46 |
skin of body | 5.30e-09 | 41 |
female gonad | 7.31e-08 | 13 |
mesoderm | 1.04e-07 | 315 |
mesoderm-derived structure | 1.04e-07 | 315 |
presumptive mesoderm | 1.04e-07 | 315 |
right ovary | 1.32e-07 | 5 |
dense mesenchyme tissue | 9.73e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.15e-16 | 14 |
reproductive organ cancer | 8.50e-07 | 29 |