FFCP PHASE1:Hg19::chr16:82788994..82789018,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:82788994..82789018,+
|short_description=p@chr16:82788994..82789018,+
|description=CAGE_peak_at_chr16:82788994..82789018,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:82788994..82789018,+ | |||
|coexpression_cluster_id=C3225 | |||
|description=CAGE_peak_at_chr16:82788994..82789018,+ | |||
|id=chr16:82788994..82789018,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.50e-30!24;CL:0002618!8.92e-29!3;CL:0002543!5.09e-25!6;CL:0000115!3.48e-20!35;CL:0000071!3.76e-18!18;CL:0002546!3.76e-18!18;CL:0002078!8.39e-16!44;CL:0005020!1.59e-14!6;CL:0002138!1.59e-14!6;CL:0005022!1.59e-14!6;CL:0000213!6.55e-12!57;CL:0000215!6.55e-12!57;CL:0000222!1.22e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002618;1.71e-66;3!CL:0002543;5.98e-34;6!CL:0002139;1.33e-33;24!CL:0000071;1.47e-25;18!CL:0000115;2.50e-18;36!CL:0002078;9.11e-15;45!CL:0000213;4.77e-11;58!CL:0000215;4.77e-11;58!CL:0002138;1.50e-09;6!CL:1000413;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,1.71e-66,3;CL:0002543,5.98e-34,6;CL:0002139,1.33e-33,24;CL:0000071,1.53e-25,18;CL:0002546,1.53e-25,18;CL:0000115,9.32e-23,36;CL:0002078,2.09e-18,45;CL:0000213,1.72e-14,58;CL:0000215,1.72e-14,58;CL:0005020,1.44e-09,6;CL:0002138,1.44e-09,6;CL:0005022,1.44e-09,6;CL:0000076,5.72e-08,63;CL:0000222,2.26e-07,121;CL:1000413,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.47e-25;18!CL:0005022;1.50e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.76e-18!18;UBERON:0004638!3.76e-18!18;UBERON:0004852!3.76e-18!18;UBERON:0002066!1.58e-17!5;UBERON:0001638!8.96e-17!9;UBERON:0003920!8.96e-17!9;UBERON:0004582!8.96e-17!9;UBERON:0000487!8.91e-15!22;UBERON:0000055!1.73e-14!69;UBERON:0006914!5.96e-13!25;UBERON:0002049!1.96e-12!79;UBERON:0007798!1.96e-12!79;UBERON:0004535!5.60e-12!110;UBERON:0001009!1.33e-11!113;UBERON:0001473!4.96e-11!8;UBERON:0004536!4.96e-11!8;UBERON:0006558!4.96e-11!8;UBERON:0002146!1.73e-10!1;UBERON:0005623!1.73e-10!1;UBERON:0004872!2.01e-09!84;UBERON:0002465!6.32e-09!10;UBERON:0001981!7.15e-09!60;UBERON:0007500!7.15e-09!60;UBERON:0004537!7.15e-09!60;UBERON:0006965!7.15e-09!60;UBERON:0003914!1.11e-07!118;UBERON:0004111!5.35e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002066;1.81e-40;5!UBERON:0004638;1.47e-25;18!UBERON:0001986;1.47e-25;18!UBERON:0004852;1.47e-25;18!UBERON:0001638;4.59e-23;9!UBERON:0010260;4.59e-23;9!UBERON:0003920;4.59e-23;9!UBERON:0004582;4.59e-23;9!UBERON:0000487;4.13e-21;22!UBERON:0006914;1.05e-18;25!UBERON:0000490;3.90e-14;33!UBERON:0004111;1.41e-08;130!UBERON:0001473;1.75e-07;8!UBERON:0004536;1.75e-07;8!UBERON:0006558;1.75e-07;8!UBERON:0002049;1.83e-07;75!UBERON:0007798;1.83e-07;75!UBERON:0007500;3.73e-07;56!UBERON:0001981;3.73e-07;56!UBERON:0004537;3.73e-07;56!UBERON:0003915;8.61e-07;9!UBERON:0004700;8.61e-07;9!UBERON:0001917;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,1.81e-40,5;UBERON:0004638,1.53e-25,18;UBERON:0001986,1.53e-25,18;UBERON:0004852,1.53e-25,18;UBERON:0001638,4.59e-23,9;UBERON:0010260,4.59e-23,9;UBERON:0003920,4.59e-23,9;UBERON:0004582,4.59e-23,9;UBERON:0000487,4.27e-21,22;UBERON:0006914,1.09e-18,25;UBERON:0000055,1.71e-12,68;UBERON:0002049,5.31e-11,78;UBERON:0007798,5.31e-11,78;UBERON:0007500,1.88e-08,59;UBERON:0001981,1.88e-08,59;UBERON:0004537,1.88e-08,59;UBERON:0006965,1.88e-08,59;UBERON:0004535,4.22e-08,109;UBERON:0001009,6.64e-08,112;UBERON:0001473,1.69e-07,8;UBERON:0004536,1.69e-07,8;UBERON:0006558,1.69e-07,8;UBERON:0003915,8.85e-07,9;UBERON:0004700,8.85e-07,9;UBERON:0001917,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,1.67799774483962,0,0.417989933073621,1.8089173141853,0,0,0,0,0,0,0,4.19708722935175,2.69435247151404,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,1.67799774483962,0,0.417989933073621,1.8089173141853,0,0,0,0,0,0,0,4.19708722935175,2.69435247151404,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:82788994..82789018,+ | |||
}} | }} |
Latest revision as of 12:48, 25 July 2015
Short description: | p@chr16:82788994..82789018, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:82788994..82789018, + |
Coexpression cluster: | C3225_Endothelial_Neural_Lymphatic_Aortic_aorta_Whole_ductus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 1.71e-66 | 3 |
vein endothelial cell | 5.98e-34 | 6 |
endothelial cell of vascular tree | 1.33e-33 | 24 |
blood vessel endothelial cell | 1.53e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.53e-25 | 18 |
endothelial cell | 9.32e-23 | 36 |
meso-epithelial cell | 2.09e-18 | 45 |
lining cell | 1.72e-14 | 58 |
barrier cell | 1.72e-14 | 58 |
lymphangioblast | 1.44e-09 | 6 |
endothelial cell of lymphatic vessel | 1.44e-09 | 6 |
vascular lymphangioblast | 1.44e-09 | 6 |
squamous epithelial cell | 5.72e-08 | 63 |
mesodermal cell | 2.26e-07 | 121 |
endothelial cell of artery | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 1.81e-40 | 5 |
blood vessel endothelium | 1.53e-25 | 18 |
endothelium | 1.53e-25 | 18 |
cardiovascular system endothelium | 1.53e-25 | 18 |
vein | 4.59e-23 | 9 |
umbilical blood vessel | 4.59e-23 | 9 |
venous blood vessel | 4.59e-23 | 9 |
venous system | 4.59e-23 | 9 |
simple squamous epithelium | 4.27e-21 | 22 |
squamous epithelium | 1.09e-18 | 25 |
vessel | 1.71e-12 | 68 |
vasculature | 5.31e-11 | 78 |
vascular system | 5.31e-11 | 78 |
epithelial tube open at both ends | 1.88e-08 | 59 |
blood vessel | 1.88e-08 | 59 |
blood vasculature | 1.88e-08 | 59 |
vascular cord | 1.88e-08 | 59 |
cardiovascular system | 4.22e-08 | 109 |
circulatory system | 6.64e-08 | 112 |
lymphatic vessel | 1.69e-07 | 8 |
lymph vasculature | 1.69e-07 | 8 |
lymphatic part of lymphoid system | 1.69e-07 | 8 |
endothelial tube | 8.85e-07 | 9 |
arterial system endothelium | 8.85e-07 | 9 |
endothelium of artery | 8.85e-07 | 9 |