FFCP PHASE1:Hg19::chr16:86612405..86612426,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=78bp_to_AB464533_5end | |association_with_transcript=78bp_to_AB464533_5end | ||
|cluster_id=chr16:86612405..86612426,+ | |||
|description=CAGE_peak_3_at_AB464533_5end | |description=CAGE_peak_3_at_AB464533_5end | ||
|id=chr16:86612405..86612426,+ | |id=chr16:86612405..86612426,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.92e-16!180;CL:0000057!2.29e-15!75;CL:0000680!7.51e-10!57;CL:0000056!7.51e-10!57;CL:0000355!7.51e-10!57;CL:0000183!1.95e-09!59;CL:0002620!2.38e-09!23;CL:0000187!5.04e-09!54;CL:0000188!4.14e-08!9;CL:0002371!5.16e-08!591;CL:0000393!1.99e-07!60;CL:0000211!1.99e-07!60;CL:0000144!5.93e-07!625 | |ontology_enrichment_celltype=CL:0000055!5.92e-16!180;CL:0000057!2.29e-15!75;CL:0000680!7.51e-10!57;CL:0000056!7.51e-10!57;CL:0000355!7.51e-10!57;CL:0000183!1.95e-09!59;CL:0002620!2.38e-09!23;CL:0000187!5.04e-09!54;CL:0000188!4.14e-08!9;CL:0002371!5.16e-08!591;CL:0000393!1.99e-07!60;CL:0000211!1.99e-07!60;CL:0000144!5.93e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.13e-15;3!CL:1000428;1.13e-15;3!CL:0000228;7.87e-13;1!CL:0002372;7.87e-13;1!CL:0002591;8.83e-13;1!CL:0002559;8.86e-10;5!CL:0000650;8.05e-07;2!CL:1000500;8.05e-07;2!CL:1000618;8.05e-07;2!CL:1001318;8.05e-07;2!CL:0002363;8.05e-07;2!CL:0002173;8.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,6.26e-16,3;CL:1000428,6.26e-16,3;CL:0000228,7.89e-13,1;CL:0002372,7.89e-13,1;CL:0002591,8.85e-13,1;CL:0002559,6.22e-10,5;CL:0002363,9.54e-07,2;CL:0000008,9.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;8.05e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;4.55e-07;2!DOID:4231;8.05e-07;2!DOID:1907;8.05e-07;2!DOID:3307;8.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,4.56e-07,2;DOID:3307,5.41e-07,2;DOID:4231,5.73e-07,2;DOID:1907,5.73e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.80e-15!83;UBERON:0002329!3.80e-15!83;UBERON:0003077!3.80e-15!83;UBERON:0003059!3.80e-15!83;UBERON:0007282!3.80e-15!83;UBERON:0009618!3.80e-15!83;UBERON:0007285!3.80e-15!83;UBERON:0005256!5.36e-15!143;UBERON:0000486!7.00e-14!82;UBERON:0002100!7.27e-13!216;UBERON:0004290!1.10e-12!70;UBERON:0000475!5.43e-12!365;UBERON:0003102!2.68e-09!95;UBERON:0001134!1.06e-08!61;UBERON:0002036!1.06e-08!61;UBERON:0003082!1.06e-08!61;UBERON:0003104!2.44e-08!238;UBERON:0009142!2.44e-08!238;UBERON:0000481!2.48e-08!347;UBERON:0002385!3.46e-08!63;UBERON:0001015!3.46e-08!63;UBERON:0000383!3.46e-08!63;UBERON:0002199!3.73e-08!45;UBERON:0002416!3.73e-08!45;UBERON:0002097!7.16e-08!40;UBERON:0000119!3.96e-07!312 | |ontology_enrichment_uberon=UBERON:0000914!3.80e-15!83;UBERON:0002329!3.80e-15!83;UBERON:0003077!3.80e-15!83;UBERON:0003059!3.80e-15!83;UBERON:0007282!3.80e-15!83;UBERON:0009618!3.80e-15!83;UBERON:0007285!3.80e-15!83;UBERON:0005256!5.36e-15!143;UBERON:0000486!7.00e-14!82;UBERON:0002100!7.27e-13!216;UBERON:0004290!1.10e-12!70;UBERON:0000475!5.43e-12!365;UBERON:0003102!2.68e-09!95;UBERON:0001134!1.06e-08!61;UBERON:0002036!1.06e-08!61;UBERON:0003082!1.06e-08!61;UBERON:0003104!2.44e-08!238;UBERON:0009142!2.44e-08!238;UBERON:0000481!2.48e-08!347;UBERON:0002385!3.46e-08!63;UBERON:0001015!3.46e-08!63;UBERON:0000383!3.46e-08!63;UBERON:0002199!3.73e-08!45;UBERON:0002416!3.73e-08!45;UBERON:0002097!7.16e-08!40;UBERON:0000119!3.96e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.13e-15;3!UBERON:0001992;1.13e-15;3!UBERON:0003891;5.39e-12;4!UBERON:0001264;1.16e-10;10!UBERON:0002073;8.86e-10;5!UBERON:0000078;5.11e-07;2!UBERON:0002012;5.11e-07;2!UBERON:0008886;5.11e-07;2!UBERON:0003566;8.05e-07;2!UBERON:0003567;8.05e-07;2!UBERON:0003838;8.05e-07;2!UBERON:0003586;8.05e-07;2!UBERON:0005169;8.05e-07;2!UBERON:0002321;8.05e-07;2!UBERON:0001777;8.05e-07;2!UBERON:0005215;8.05e-07;2!UBERON:0002303;8.05e-07;2!UBERON:0002319;8.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,6.26e-16,3;UBERON:0001992,6.26e-16,3;UBERON:0003891,9.37e-12,4;UBERON:0001264,9.87e-11,10;UBERON:0002073,6.22e-10,5;UBERON:0005086,6.22e-10,5;UBERON:0000078,5.11e-07,2;UBERON:0007497,5.11e-07,2;UBERON:0003643,5.11e-07,2;UBERON:0003504,5.11e-07,2;UBERON:0003469,5.11e-07,2;UBERON:0003496,5.11e-07,2;UBERON:0002012,5.11e-07,2;UBERON:0008886,5.11e-07,2;UBERON:0007303,5.11e-07,2;UBERON:0002061,5.11e-07,2;UBERON:0005432,5.11e-07,2;UBERON:0004363,5.11e-07,2;UBERON:0003566,9.54e-07,2;UBERON:0001777,9.54e-07,2 | |||
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| ||
|short_description=p3@AB464533 | |short_description=p3@AB464533 | ||
}} | }} |
Latest revision as of 13:08, 25 July 2015
Short description: | p3@AB464533 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AB464533_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_AB464533_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 6.26e-16 | 3 |
stem cell of epidermis | 6.26e-16 | 3 |
multinucleate cell | 7.89e-13 | 1 |
myotube | 7.89e-13 | 1 |
smooth muscle cell of the pulmonary artery | 8.85e-13 | 1 |
hair follicle cell | 6.22e-10 | 5 |
keratocyte | 9.54e-07 | 2 |
migratory cranial neural crest cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 6.26e-16 | 3 |
papillary layer of dermis | 6.26e-16 | 3 |
stroma | 9.37e-12 | 4 |
pancreas | 9.87e-11 | 10 |
hair follicle | 6.22e-10 | 5 |
hair follicle placode | 6.22e-10 | 5 |
mixed ectoderm/mesoderm/endoderm-derived structure | 5.11e-07 | 2 |
developing epithelial placode | 5.11e-07 | 2 |
respiratory system arterial blood vessel | 5.11e-07 | 2 |
respiratory system blood vessel | 5.11e-07 | 2 |
respiratory system artery | 5.11e-07 | 2 |
head blood vessel | 5.11e-07 | 2 |
pulmonary artery | 5.11e-07 | 2 |
pulmonary vascular system | 5.11e-07 | 2 |
pharyngeal vasculature | 5.11e-07 | 2 |
truncus arteriosus | 5.11e-07 | 2 |
aortic sac | 5.11e-07 | 2 |
pharyngeal arch artery | 5.11e-07 | 2 |
head connective tissue | 9.54e-07 | 2 |
substantia propria of cornea | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 4.56e-07 | 2 |
teratoma | 5.41e-07 | 2 |
histiocytoma | 5.73e-07 | 2 |
malignant fibroxanthoma | 5.73e-07 | 2 |