FFCP PHASE1:Hg19::chr16:9934872..9934888,-: Difference between revisions
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|id=chr16:9934872..9934888,-
|short_description=p@chr16:9934872..9934888,-
|description=CAGE_peak_at_chr16:9934872..9934888,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:9934872..9934888,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr16:9934872..9934888,- | |||
|id=chr16:9934872..9934888,- | |||
|ontology_enrichment_celltype=CL:0000945!1.23e-16!24;CL:0000826!1.23e-16!24;CL:0000946!1.11e-12!1;CL:0000786!1.11e-12!1;CL:0000980!1.11e-12!1;CL:0000838!1.83e-07!52;CL:0000542!2.57e-07!53;CL:0000051!2.57e-07!53;CL:0000785!5.73e-07!2;CL:0000955!5.73e-07!2;CL:0000818!5.73e-07!2;CL:0000954!5.73e-07!2;CL:0000816!5.73e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.33e-33;24!CL:0000542;5.13e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.33e-33,24;CL:0000826,1.33e-33,24;CL:0000838,4.67e-16,52;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;5.13e-07;53 | |||
|ontology_enrichment_disease=DOID:630!8.85e-13!1;DOID:0050177!8.85e-13!1;DOID:0050427!8.85e-13!1;DOID:2355!2.20e-12!1;DOID:74!8.06e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:630;5.12e-50;1!DOID:0050177;5.12e-50;1!DOID:0050427;5.12e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.99e-50,1;DOID:0050177,3.99e-50,1;DOID:0050427,3.99e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!1.45e-22!22;UBERON:0002021!2.78e-20!5;UBERON:0001869!3.13e-20!32;UBERON:0000956!6.70e-20!25;UBERON:0000203!6.70e-20!25;UBERON:0001893!4.98e-19!34;UBERON:0001950!3.02e-18!20;UBERON:0000200!7.17e-17!6;UBERON:0002780!1.01e-15!41;UBERON:0001890!1.01e-15!41;UBERON:0006240!1.01e-15!41;UBERON:0003080!2.45e-15!42;UBERON:0002791!4.38e-15!33;UBERON:0002020!1.23e-14!34;UBERON:0003528!1.23e-14!34;UBERON:0003056!3.73e-13!61;UBERON:0007190!3.08e-12!1;UBERON:0002902!3.85e-12!1;UBERON:0009899!3.85e-12!1;UBERON:0002581!4.31e-12!1;UBERON:0000955!2.59e-11!69;UBERON:0006238!2.59e-11!69;UBERON:0001049!3.78e-11!57;UBERON:0005068!3.78e-11!57;UBERON:0006241!3.78e-11!57;UBERON:0007135!3.78e-11!57;UBERON:0005743!4.49e-11!86;UBERON:0002616!9.51e-11!59;UBERON:0000073!6.35e-10!94;UBERON:0001016!6.35e-10!94;UBERON:0001872!1.57e-09!5;UBERON:0001017!2.17e-09!82;UBERON:0003075!4.69e-09!86;UBERON:0007284!4.69e-09!86;UBERON:0002346!1.32e-08!90;UBERON:0000033!2.13e-07!123;UBERON:0000153!5.36e-07!129;UBERON:0007811!5.36e-07!129;UBERON:0001954!6.42e-07!2;UBERON:0003022!6.42e-07!2;UBERON:0002421!6.42e-07!2;UBERON:0002600!6.42e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr16:9934872..9934888,- | |||
}} | }} | ||
Latest revision as of 13:37, 25 July 2015
| Short description: | p@chr16:9934872..9934888, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr16:9934872..9934888, - |
| Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte of B lineage | 1.33e-33 | 24 |
| pro-B cell | 1.33e-33 | 24 |
| lymphoid lineage restricted progenitor cell | 4.67e-16 | 52 |
| lymphocyte | 9.01e-16 | 53 |
| common lymphoid progenitor | 9.01e-16 | 53 |
| nongranular leukocyte | 1.17e-07 | 115 |
| hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
| Ontology term | p-value | n |
|---|---|---|
| genetic disease | 3.99e-50 | 1 |
| monogenic disease | 3.99e-50 | 1 |
| xeroderma pigmentosum | 3.99e-50 | 1 |