FFCP PHASE1:Hg19::chr17:32588803..32588809,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:32588803..32588809,+ | |||
|description=CAGE_peak_at_chr17:32588803..32588809,+ | |||
|id=chr17:32588803..32588809,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.18e-54!42;CL:0000860!1.51e-50!45;CL:0002194!1.45e-34!63;CL:0000576!1.45e-34!63;CL:0000040!1.45e-34!63;CL:0000559!1.45e-34!63;CL:0002009!2.03e-33!65;CL:0000839!7.86e-31!70;CL:0000557!2.34e-30!71;CL:0000766!3.61e-28!76;CL:0000763!2.10e-20!112;CL:0000049!2.10e-20!112;CL:0002087!4.42e-19!119;CL:0002031!3.55e-18!124;CL:0000738!1.04e-15!140;CL:0002032!2.05e-14!165;CL:0000837!2.05e-14!165;CL:0000037!1.11e-13!172;CL:0000566!1.11e-13!172;CL:0000988!9.95e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.02e-20;33!CL:0002057;7.02e-20;33!CL:0000473;1.86e-13;39!CL:0000234;1.86e-13;39!CL:0000576;5.42e-10;48!CL:0000766;2.32e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-15,42;CL:0002057,1.01e-15,42;CL:0000473,7.54e-14,48;CL:0000234,7.54e-14,48;CL:0002194,3.21e-11,59;CL:0000576,3.21e-11,59;CL:0000040,3.21e-11,59;CL:0000559,3.21e-11,59;CL:0002009,7.02e-11,61;CL:0000839,4.06e-10,66;CL:0000557,5.60e-10,67;CL:0000766,2.44e-09,72;CL:0002087,3.65e-09,115;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-12;42 | |||
|ontology_enrichment_disease=DOID:2355!3.06e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:2355;6.62e-41;1!DOID:74;3.11e-21;2!DOID:1287;2.53e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,6.62e-41,1;DOID:74,3.11e-21,2;DOID:1287,2.53e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.30e-26!80;UBERON:0001474!1.51e-24!86;UBERON:0002193!9.18e-23!112;UBERON:0002405!4.43e-22!115;UBERON:0004765!1.93e-20!101;UBERON:0001434!1.93e-20!101;UBERON:0002390!3.29e-20!102;UBERON:0003061!3.29e-20!102;UBERON:0002204!1.40e-12!167;UBERON:0005418!5.70e-09!1;UBERON:0001389!5.70e-09!1;UBERON:0000026!5.70e-09!1;UBERON:0008784!5.70e-09!1;UBERON:0006058!5.70e-09!1;UBERON:0003663!5.70e-09!1;UBERON:0001383!5.70e-09!1;UBERON:0004256!5.70e-09!1;UBERON:0002529!5.70e-09!1;UBERON:0004708!5.70e-09!1;UBERON:0002101!5.70e-09!1;UBERON:0004709!5.70e-09!1;UBERON:0003661!5.70e-09!1;UBERON:0002471!5.70e-09!1;UBERON:0004357!5.70e-09!1;UBERON:0009872!5.70e-09!1;UBERON:0004347!5.70e-09!1;UBERON:0005420!5.70e-09!1;UBERON:0005732!5.70e-09!1;UBERON:0006057!5.70e-09!1;UBERON:0000978!5.70e-09!1;UBERON:0002103!5.70e-09!1;UBERON:0001665!5.70e-09!1;UBERON:0003823!5.70e-09!1;UBERON:0000154!5.70e-09!1;UBERON:0005733!5.70e-09!1;UBERON:0005730!5.70e-09!1;UBERON:0003081!6.29e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.93e-09,76;UBERON:0001474,2.75e-08,82;UBERON:0004765,1.31e-07,90;UBERON:0002405,2.19e-07,93;UBERON:0002390,4.84e-07,98;UBERON:0003061,4.84e-07,98;UBERON:0001434,6.51e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.863077176966451,1.0246428261164,1.41889337933151,0,0,0,0.564727018627814,0,0,0.612167784741805,0.641858054152187,0.639337125799041,0.329851300186716,0.598390972864896,0.852449501065388,0.870627715885752,0,0,2.00998932205395,0.521482918420201,1.08594422352558,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89497327502609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:32588803..32588809,+ | |||
}} |
Latest revision as of 15:33, 25 July 2015
Short description: | p@chr17:32588803..32588809, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:32588803..32588809, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.01e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-15 | 42 |
defensive cell | 7.54e-14 | 48 |
phagocyte | 7.54e-14 | 48 |
monopoietic cell | 3.21e-11 | 59 |
monocyte | 3.21e-11 | 59 |
monoblast | 3.21e-11 | 59 |
promonocyte | 3.21e-11 | 59 |
macrophage dendritic cell progenitor | 7.02e-11 | 61 |
myeloid lineage restricted progenitor cell | 4.06e-10 | 66 |
granulocyte monocyte progenitor cell | 5.60e-10 | 67 |
myeloid leukocyte | 2.44e-09 | 72 |
nongranular leukocyte | 3.65e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.93e-09 | 76 |
bone element | 2.75e-08 | 82 |
skeletal element | 1.31e-07 | 90 |
immune system | 2.19e-07 | 93 |
hematopoietic system | 4.84e-07 | 98 |
blood island | 4.84e-07 | 98 |
skeletal system | 6.51e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
anemia | 6.62e-41 | 1 |
hematopoietic system disease | 3.11e-21 | 2 |
cardiovascular system disease | 2.53e-11 | 4 |