FFCP PHASE1:Hg19::chr17:38609237..38609305,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:38609237..38609305,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38609237..38609305,+ | |||
|id=chr17:38609237..38609305,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.49e-22!180;CL:0000222!1.68e-18!119;CL:0000057!2.04e-14!75;CL:0000183!2.12e-14!59;CL:0000680!1.22e-13!57;CL:0000056!1.22e-13!57;CL:0000355!1.22e-13!57;CL:0000187!2.06e-12!54;CL:0000393!3.09e-11!60;CL:0000211!3.09e-11!60;CL:0000192!6.26e-11!42;CL:0000514!6.26e-11!42;CL:0000220!3.53e-08!246;CL:0002321!3.76e-08!248;CL:0000359!7.42e-08!32;CL:0000213!3.79e-07!57;CL:0000215!3.79e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.43e-08;43!CL:0000359;1.45e-07;32!CL:0000187;2.24e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.53e-18,121;CL:0000057,7.93e-15,76;CL:0000680,2.55e-14,58;CL:0000056,2.55e-14,58;CL:0000355,2.55e-14,58;CL:0000187,6.68e-13,55;CL:0000192,2.74e-11,43;CL:0000514,2.74e-11,43;CL:0000393,1.47e-10,61;CL:0000211,1.47e-10,61;CL:0000359,1.45e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.43e-08;43!CL:0000355;2.89e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.24e-20!216;UBERON:0005256!5.96e-20!143;UBERON:0000490!8.83e-18!138;UBERON:0003914!6.61e-16!118;UBERON:0002049!2.49e-15!79;UBERON:0007798!2.49e-15!79;UBERON:0000914!3.83e-15!83;UBERON:0002329!3.83e-15!83;UBERON:0003077!3.83e-15!83;UBERON:0003059!3.83e-15!83;UBERON:0007282!3.83e-15!83;UBERON:0009618!3.83e-15!83;UBERON:0007285!3.83e-15!83;UBERON:0002385!6.84e-15!63;UBERON:0001015!6.84e-15!63;UBERON:0000383!6.84e-15!63;UBERON:0001134!1.84e-14!61;UBERON:0002036!1.84e-14!61;UBERON:0003082!1.84e-14!61;UBERON:0004872!2.60e-14!84;UBERON:0003104!9.24e-14!238;UBERON:0009142!9.24e-14!238;UBERON:0004290!1.85e-13!70;UBERON:0000486!4.86e-13!82;UBERON:0000055!2.12e-12!69;UBERON:0001981!3.84e-12!60;UBERON:0007500!3.84e-12!60;UBERON:0004537!3.84e-12!60;UBERON:0006965!3.84e-12!60;UBERON:0001009!8.24e-11!113;UBERON:0004535!1.68e-10!110;UBERON:0000481!2.25e-10!347;UBERON:0000475!5.52e-10!365;UBERON:0001637!2.38e-09!42;UBERON:0003509!2.38e-09!42;UBERON:0004572!2.38e-09!42;UBERON:0000477!2.90e-09!286;UBERON:0004573!8.67e-09!33;UBERON:0004571!8.67e-09!33;UBERON:0009569!9.74e-09!113;UBERON:0000468!3.23e-08!659;UBERON:0000926!5.99e-08!448;UBERON:0004120!5.99e-08!448;UBERON:0006603!5.99e-08!448;UBERON:0000119!6.56e-08!312;UBERON:0000483!1.26e-07!309;UBERON:0004111!7.99e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.90e-09;31!UBERON:0001015;2.90e-09;31!UBERON:0000383;2.90e-09;31!UBERON:0004573;5.04e-08;33!UBERON:0004571;5.04e-08;33!UBERON:0001637;8.06e-07;42!UBERON:0003509;8.06e-07;42!UBERON:0004572;8.06e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.07e-19,160;UBERON:0009142,1.07e-19,160;UBERON:0005256,4.82e-18,122;UBERON:0002100,5.26e-16,199;UBERON:0002385,8.11e-16,64;UBERON:0001015,8.11e-16,64;UBERON:0000383,8.11e-16,64;UBERON:0000490,1.04e-15,148;UBERON:0007503,1.22e-15,78;UBERON:0001134,2.64e-15,62;UBERON:0002036,2.64e-15,62;UBERON:0003082,2.64e-15,62;UBERON:0007524,5.69e-14,73;UBERON:0002049,6.76e-14,78;UBERON:0007798,6.76e-14,78;UBERON:0002329,8.00e-14,71;UBERON:0003059,8.00e-14,71;UBERON:0007282,8.00e-14,71;UBERON:0004290,8.00e-14,71;UBERON:0009618,8.00e-14,71;UBERON:0003077,2.32e-13,72;UBERON:0007285,2.32e-13,72;UBERON:0003914,3.91e-13,117;UBERON:0004872,7.55e-13,83;UBERON:0000055,1.02e-11,68;UBERON:0000486,2.28e-11,83;UBERON:0007500,4.16e-11,59;UBERON:0001981,4.16e-11,59;UBERON:0004537,4.16e-11,59;UBERON:0006965,4.16e-11,59;UBERON:0001009,4.53e-10,112;UBERON:0004535,6.30e-10,109;UBERON:0000926,1.34e-09,315;UBERON:0004120,1.34e-09,315;UBERON:0006603,1.34e-09,315;UBERON:0001637,5.99e-09,42;UBERON:0003509,5.99e-09,42;UBERON:0004572,5.99e-09,42;UBERON:0004573,1.08e-08,33;UBERON:0004571,1.08e-08,33;UBERON:0009569,1.97e-07,112 | |||
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| |||
|short_description=p@chr17:38609237..38609305,+ | |||
}} |
Latest revision as of 16:27, 25 July 2015
Short description: | p@chr17:38609237..38609305, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38609237..38609305, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.53e-18 | 121 |
fibroblast | 7.93e-15 | 76 |
muscle precursor cell | 2.55e-14 | 58 |
myoblast | 2.55e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.55e-14 | 58 |
muscle cell | 6.68e-13 | 55 |
smooth muscle cell | 2.74e-11 | 43 |
smooth muscle myoblast | 2.74e-11 | 43 |
electrically responsive cell | 1.47e-10 | 61 |
electrically active cell | 1.47e-10 | 61 |
vascular associated smooth muscle cell | 1.45e-07 | 32 |