FFCP PHASE1:Hg19::chr17:38612787..38612806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38612787..38612806,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38612787..38612806,+ | |description=CAGE_peak_at_chr17:38612787..38612806,+ | ||
|id=chr17:38612787..38612806,+ | |id=chr17:38612787..38612806,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.75e-25!180;CL:0000057!1.74e-17!75;CL:0000183!8.31e-15!59;CL:0000680!1.10e-13!57;CL:0000056!1.10e-13!57;CL:0000355!1.10e-13!57;CL:0000222!3.28e-13!119;CL:0000187!1.69e-12!54;CL:0000192!3.05e-11!42;CL:0000514!3.05e-11!42;CL:0000393!3.61e-11!60;CL:0000211!3.61e-11!60;CL:0002371!6.24e-08!591;CL:0000499!2.73e-07!27;CL:0000359!3.23e-07!32;CL:0000048!6.45e-07!430;CL:0000327!8.01e-07!14 | |ontology_enrichment_celltype=CL:0000055!5.75e-25!180;CL:0000057!1.74e-17!75;CL:0000183!8.31e-15!59;CL:0000680!1.10e-13!57;CL:0000056!1.10e-13!57;CL:0000355!1.10e-13!57;CL:0000222!3.28e-13!119;CL:0000187!1.69e-12!54;CL:0000192!3.05e-11!42;CL:0000514!3.05e-11!42;CL:0000393!3.61e-11!60;CL:0000211!3.61e-11!60;CL:0002371!6.24e-08!591;CL:0000499!2.73e-07!27;CL:0000359!3.23e-07!32;CL:0000048!6.45e-07!430;CL:0000327!8.01e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000499;1.75e-10;28!CL:0000327;4.06e-09;15!CL:0000134;3.25e-08;55!CL:0000723;1.37e-07;61!CL:0002320;2.96e-07;188!CL:0000048;3.76e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.69e-16,427;CL:0000723,9.97e-16,433;CL:0000034,9.69e-15,441;CL:0000057,1.12e-12,76;CL:0000680,3.64e-11,58;CL:0000056,3.64e-11,58;CL:0000355,3.64e-11,58;CL:0000499,1.96e-10,28;CL:0000187,2.62e-10,55;CL:0002320,2.65e-10,361;CL:0000327,5.14e-09,15;CL:0000192,1.13e-08,43;CL:0000514,1.13e-08,43;CL:0000393,1.93e-08,61;CL:0000211,1.93e-08,61;CL:0000134,1.22e-07,354;CL:0000136,4.42e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.81e-22!143;UBERON:0002100!1.26e-20!216;UBERON:0000914!2.94e-14!83;UBERON:0002329!2.94e-14!83;UBERON:0003077!2.94e-14!83;UBERON:0003059!2.94e-14!83;UBERON:0007282!2.94e-14!83;UBERON:0009618!2.94e-14!83;UBERON:0007285!2.94e-14!83;UBERON:0003914!1.20e-13!118;UBERON:0003104!2.34e-13!238;UBERON:0009142!2.34e-13!238;UBERON:0001134!8.55e-13!61;UBERON:0002036!8.55e-13!61;UBERON:0003082!8.55e-13!61;UBERON:0002385!1.22e-12!63;UBERON:0001015!1.22e-12!63;UBERON:0000383!1.22e-12!63;UBERON:0004290!2.60e-12!70;UBERON:0000490!6.06e-12!138;UBERON:0000486!7.75e-12!82;UBERON:0002049!5.66e-11!79;UBERON:0007798!5.66e-11!79;UBERON:0000475!6.28e-11!365;UBERON:0000481!1.91e-09!347;UBERON:0009569!3.33e-09!113;UBERON:0004872!4.31e-09!84;UBERON:0000926!6.94e-09!448;UBERON:0004120!6.94e-09!448;UBERON:0006603!6.94e-09!448;UBERON:0001009!8.86e-09!113;UBERON:0000468!9.57e-09!659;UBERON:0004535!1.53e-08!110;UBERON:0000055!1.11e-07!69;UBERON:0000477!1.31e-07!286;UBERON:0002417!1.65e-07!61;UBERON:0000916!1.65e-07!61;UBERON:0001981!8.88e-07!60;UBERON:0007500!8.88e-07!60;UBERON:0004537!8.88e-07!60;UBERON:0006965!8.88e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.12e-09;9!UBERON:0000042;6.12e-09;9!UBERON:0004905;2.88e-08;8!UBERON:0000982;2.88e-08;8!UBERON:0004770;2.88e-08;8!UBERON:0003688;5.91e-08;6!UBERON:0002358;5.91e-08;6!UBERON:0003684;5.91e-08;6!UBERON:0001178;5.91e-08;6!UBERON:0002384;7.07e-08;198!UBERON:0011135;2.52e-07;5!UBERON:0002216;2.52e-07;5!UBERON:0011134;2.52e-07;5!UBERON:0002209;2.52e-07;5!UBERON:0002213;2.52e-07;5!UBERON:0007844;2.52e-07;5!UBERON:0011138;2.52e-07;5!UBERON:0001130;2.52e-07;5!UBERON:0001066;2.52e-07;5!UBERON:0001468;2.52e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,8.95e-14,160;UBERON:0009142,8.95e-14,160;UBERON:0005256,1.63e-12,122;UBERON:0007503,1.85e-11,78;UBERON:0002384,1.33e-10,371;UBERON:0007524,7.85e-10,73;UBERON:0001134,7.88e-10,62;UBERON:0002036,7.88e-10,62;UBERON:0003082,7.88e-10,62;UBERON:0002329,1.93e-09,71;UBERON:0003059,1.93e-09,71;UBERON:0007282,1.93e-09,71;UBERON:0004290,1.93e-09,71;UBERON:0009618,1.93e-09,71;UBERON:0002385,3.11e-09,64;UBERON:0001015,3.11e-09,64;UBERON:0000383,3.11e-09,64;UBERON:0003077,3.57e-09,72;UBERON:0007285,3.57e-09,72;UBERON:0002100,6.51e-09,199;UBERON:0004905,2.87e-08,8;UBERON:0000982,2.87e-08,8;UBERON:0004770,2.87e-08,8;UBERON:0000486,3.20e-08,83;UBERON:0003688,7.15e-08,6;UBERON:0002358,7.15e-08,6;UBERON:0003684,7.15e-08,6;UBERON:0001178,7.15e-08,6;UBERON:0011135,2.51e-07,5;UBERON:0002216,2.51e-07,5;UBERON:0011134,2.51e-07,5;UBERON:0002209,2.51e-07,5;UBERON:0002213,2.51e-07,5;UBERON:0005856,2.51e-07,5;UBERON:0005866,2.51e-07,5;UBERON:0005863,2.51e-07,5;UBERON:0007844,2.51e-07,5;UBERON:0011138,2.51e-07,5;UBERON:0001130,2.51e-07,5;UBERON:0001066,2.51e-07,5;UBERON:0001468,2.51e-07,5 | |||
|phase1_expression=5.26867299884614,8.13581990785736,5.21531295155093,16.0117277365009,4.02264984984559,14.8297549097063,0,3.79031924056099,5.48489819219661,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,7.67351388352289,4.63956326019082,1.34465029290355,0.602694528023977,2.19093027116212,0,0.492484232307152,1.63200552995402,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,5.06014813338393,9.02408239144601,11.1531819599834,1.5905718941022,3.40644409211845,0.378139268656271,0.665188192387692,0.702678285545008,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.838998872419812,0.825354125820202,0.417989933073621,1.29208379584664,1.42306505074684,1.33888245105868,0.402829317109147,0,0.488124115096339,0.367663080345869,0.81014194788176,0.714397826272638,0,0.450445921933289,0,0,0.183201743930407,0,0,0,4.47274756525787,0.506522046658319,0.264818361626438,0.573673241497627,2.12801029319014,1.68203280042692,1.06748995729705,0.74000264525148,1.24484414159907,0.404132016209064,0.653847612453835,7.26515652695671,3.45705554687999,0,0,1.1409436430889,0.896692083310806,0.117434498643765,0,0.140450806702248,3.67477508258808,0.859840221182376,5.88956952701863,1.18800285728205,6.18167323196392,0.910161361938026,2.15585442544872,0.673344455816265,1.00094815897571,0.831192346452549,0.877955241761676,8.58165828237255,4.35690370829131,0.226864366320042,0.358779271377724,1.2813443329114,5.51022943014861,0.900273288253207,2.98852334791473,0.515281080091258,3.7223371266318,0.506328996723799,1.36411807225678,0.504867548488229,2.39329736469978,3.55621325001386,1.42003837006646,1.20902517873168,1.3564847384839,0,0.272746120590835,0,0.243947412259191,0,0,0.207322110030741,0.504641701751257,0,1.56449532329816,3.21620469096443,0,2.3218396401599,3.60939740834793,0,0,0,0,0,0,0,0.196221465125346,0.38474715694639,5.90524363699719,2.80483547606892,1.2347220339942,5.88034845542168,3.80265104465493,3.9313088667105,1.77236972004421,0,0,0.686271241194102,0,0,0,0.277765335475589,0.651616610620649,6.23960871167747,0,0,0.352226082707465,0.577465791044295,0,0.570762456703795,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1396703616701,0.87192013766656,1.6134422880609,1.03417372606222,0,0.845302752556,1.06375246633948,3.12022310734098,3.34369586540785,1.41849132023278,2.1313774321288,2.7165818795048,10.8524321078289,1.64648067356154,1.30294473717494,1.42156779497018,0.791951872933429,3.31583314765545,0,2.89921674427965,0,0,0,1.67737398844108,4.59447743336456,0,2.75084482668401,3.28762116080613,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,7.85225547002495,13.0044335475516,7.05289061619313,6.65506756898583,13.3821741597871,5.20417969611984,2.81139395982512,2.10662269809403,4.5481500811197,1.03473071292505,1.99267679560631,1.65932251687533,2.43274120510632,7.63624514104688,5.14715135716284,0,0,0,0.909382714338778,0,1.20956117331872,3.2254015016441,3.52962538562544,5.05188169979532,4.86928767171664,3.07024349440022,5.46903331888265,11.8734453155993,0.154209693802656,0.532685175939381,0.574890092096664,3.11552657510173,0.464841513839837,0.241718899183244,0.601519410909855,0.276242966807689,1.14814448164607,2.73136752010076,1.70461739447251,0.451199612907412,0.0770153371044148,2.35304930753057,0,0.422206515571503,2.27466768141793,1.02056223165909,0.863663664408557,13.880452742126,2.43851793789468,2.50844886927427,0.509752546090077,0,0.671624264166535,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0.574265537996172,0,0,0.48335359146061,2.00263202249038,1.99554777143968,0.137836572484531,1.07420244868274,4.35050081742686,1.44885266607372,1.24644849905432,0.165284915360978,0,0.255225424989168,0,5.57814659156743,2.83331112147576,0.6970372701606,0,1.59691809095107,0.869932992075073,0.55597265731176,0.286249773483982,1.48863347743867,5.37845022021834,2.85945290885737,2.81487570442467,0.855877976067841,2.22742273548156,0.78494864019923,1.43897966066652,1.92175920815238,0.942499218765491,0.606547444719948,0,0.421258456238981,1.46290121726877,3.41198885483798,9.50851320810799,2.45699840534374,1.83827061539827,2.26016233240486,2.2054613741845,0.66343897524122,1.75380354101505,8.68163301400032,3.27947376023316,0.202910376962704,1.239293992399,1.12678241012897,0.286822704408103,0.0982490410131212,0.35667105148125,1.77380532035299,9.28873595309722,9.87884678879706,0.75894634753143,0.699869440489966,0,0,0,0.564862804660675,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.338583555603207,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0.73254089635947,0,0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| ||
|short_description=p@chr17:38612787..38612806,+ | |short_description=p@chr17:38612787..38612806,+ | ||
}} | }} |
Latest revision as of 16:27, 25 July 2015
Short description: | p@chr17:38612787..38612806, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38612787..38612806, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.69e-16 | 427 |
somatic stem cell | 9.97e-16 | 433 |
stem cell | 9.69e-15 | 441 |
fibroblast | 1.12e-12 | 76 |
muscle precursor cell | 3.64e-11 | 58 |
myoblast | 3.64e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.64e-11 | 58 |
stromal cell | 1.96e-10 | 28 |
muscle cell | 2.62e-10 | 55 |
connective tissue cell | 2.65e-10 | 361 |
extracellular matrix secreting cell | 5.14e-09 | 15 |
smooth muscle cell | 1.13e-08 | 43 |
smooth muscle myoblast | 1.13e-08 | 43 |
electrically responsive cell | 1.93e-08 | 61 |
electrically active cell | 1.93e-08 | 61 |
mesenchymal cell | 1.22e-07 | 354 |
fat cell | 4.42e-07 | 15 |