FFCP PHASE1:Hg19::chr17:39775719..39775763,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39775719..39775763,- | |||
|coexpression_cluster_id=C405 | |coexpression_cluster_id=C405 | ||
|description=CAGE_peak_at_chr17:39775719..39775763,- | |description=CAGE_peak_at_chr17:39775719..39775763,- |
Latest revision as of 16:45, 25 July 2015
Short description: | p@chr17:39775719..39775763, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39775719..39775763, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr17:39775719..39775763- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.05e-25 | 42 |
respiratory epithelial cell | 3.81e-19 | 13 |
endodermal cell | 2.19e-17 | 58 |
gingival epithelial cell | 1.17e-16 | 3 |
epithelial cell | 1.64e-16 | 253 |
transitional epithelial cell | 1.07e-12 | 4 |
urothelial cell | 1.07e-12 | 4 |
corneal epithelial cell | 8.98e-12 | 2 |
epithelial cell of tracheobronchial tree | 1.60e-09 | 9 |
epithelial cell of lower respiratory tract | 1.60e-09 | 9 |
Showing 1 to 10 of 26 entries
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.17e-16 | 3 |
endoderm-derived structure | 4.26e-11 | 160 |
endoderm | 4.26e-11 | 160 |
presumptive endoderm | 4.26e-11 | 160 |
urothelium | 2.97e-10 | 5 |
epithelial fold | 2.03e-09 | 47 |
respiratory system | 2.17e-09 | 74 |
transitional epithelium | 1.28e-08 | 6 |
respiratory system epithelium | 2.69e-08 | 28 |
endo-epithelium | 3.56e-08 | 82 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
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skin squamous cell carcinoma | 7.60e-07 | 1 |
keratoacanthoma | 7.60e-07 | 1 |
Showing 1 to 2 of 2 entries