FFCP PHASE1:Hg19::chr17:48263753..48263758,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:48263753..48263758,+ to FFCP PHASE1:Hg19::chr17:48263753..48263758,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:48263753..48263758,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48263753..48263758,+ | |||
|id=chr17:48263753..48263758,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.92e-12!180;CL:0000057!3.07e-12!75;CL:0000136!4.92e-10!15;CL:0000499!8.45e-08!27;CL:1000306!6.15e-07!4;CL:0002547!6.15e-07!4;CL:0000327!8.93e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000197;4.11e-14;6!CL:0000098;4.11e-14;6!CL:0002167;4.11e-14;6!CL:0002569;6.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.74e-14,6;CL:0000098,2.74e-14,6;CL:0002167,2.74e-14,6;CL:0002569,5.26e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.72e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!4.19e-08!12;UBERON:0000042!4.19e-08!12;UBERON:0003688!1.33e-07!6;UBERON:0002358!1.33e-07!6;UBERON:0003684!1.33e-07!6;UBERON:0001178!1.33e-07!6;UBERON:0000415!6.15e-07!4;UBERON:0007240!6.15e-07!4;UBERON:0005742!6.15e-07!4;UBERON:0005734!6.15e-07!4;UBERON:0004664!6.15e-07!4;UBERON:0004663!6.15e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;2.28e-10;1!UBERON:0003831;2.28e-10;1!UBERON:0003898;2.28e-10;1!UBERON:0004830;2.28e-10;1!UBERON:0003830;2.28e-10;1!UBERON:0005175;2.28e-10;1!UBERON:0001774;2.28e-10;1!UBERON:0001103;2.28e-10;1!UBERON:0002331;7.83e-09;10!UBERON:0003688;4.58e-07;6!UBERON:0002358;4.58e-07;6!UBERON:0003684;4.58e-07;6!UBERON:0001178;4.58e-07;6!UBERON:0003422;6.28e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.57e-10,1;UBERON:0003831,1.57e-10,1;UBERON:0003898,1.57e-10,1;UBERON:0004830,1.57e-10,1;UBERON:0003830,1.57e-10,1;UBERON:0005175,1.57e-10,1;UBERON:0001774,1.57e-10,1;UBERON:0001103,1.57e-10,1;UBERON:0010084,1.57e-10,1;UBERON:0002331,6.67e-09,10;UBERON:0000358,6.67e-09,10;UBERON:0000307,6.67e-09,10;UBERON:0000091,6.67e-09,10;UBERON:0000087,6.67e-09,10;UBERON:0007010,6.67e-09,10;UBERON:0007806,6.67e-09,10;UBERON:0008780,6.67e-09,10;UBERON:0005728,6.67e-09,10;UBERON:0003422,5.26e-07,6;UBERON:0003688,5.58e-07,6;UBERON:0002358,5.58e-07,6;UBERON:0003684,5.58e-07,6;UBERON:0001178,5.58e-07,6 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0.50133791063589,0,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.860509862246441,0.354668382198357,0,0,1.48000529050296,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,1.22595118319608,0,0.113432183160021,0,0.427114777637135,0,0.900273288253207,0,0.515281080091258,0.37223371266318,1.0126579934476,0,0.504867548488229,0.276149695926898,0,2.13005755509969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0.285955987316295,1.62786481617433,0,0,0,0,0,0,0.099972991182057,0,0,0,1.4377491329495,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,1.87173775377726,1.78428988797162,1.10391690523754,0.117141414992713,0,0,0,1.32845119707087,0.184369168541703,0,0.391602314925481,0,0,0,0,0,0,0.907170879989041,0,0.460385919864187,1.12264037773229,0.768834895534206,0,2.57366273829772,0,0,0.887808626565635,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0.307007349452259,0,0,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0.422215270595328,0.658589785919804,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.466311601748341,0.147855149989634,0,0.449803112163605,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,0,0,0.214821114084977,0.464033759878494,0.796191777397232,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,2.23197010900051,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0.202117188958219,0,0,0,0,0.665320713092027,0,0,0,0,4.69281884806909,0,0,0,0,0 | |phase1_expression=0,0.642301571672949,0.140954404095971,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0.50133791063589,0,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.860509862246441,0.354668382198357,0,0,1.48000529050296,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,1.22595118319608,0,0.113432183160021,0,0.427114777637135,0,0.900273288253207,0,0.515281080091258,0.37223371266318,1.0126579934476,0,0.504867548488229,0.276149695926898,0,2.13005755509969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0.285955987316295,1.62786481617433,0,0,0,0,0,0,0.099972991182057,0,0,0,1.4377491329495,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,1.87173775377726,1.78428988797162,1.10391690523754,0.117141414992713,0,0,0,1.32845119707087,0.184369168541703,0,0.391602314925481,0,0,0,0,0,0,0.907170879989041,0,0.460385919864187,1.12264037773229,0.768834895534206,0,2.57366273829772,0,0,0.887808626565635,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0.307007349452259,0,0,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0.422215270595328,0.658589785919804,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.466311601748341,0.147855149989634,0,0.449803112163605,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,0,0,0.214821114084977,0.464033759878494,0.796191777397232,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,2.23197010900051,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0.202117188958219,0,0,0,0,0.665320713092027,0,0,0,0,4.69281884806909,0,0,0,0,0 | ||
|short_description=p@chr17:48263753..48263758,+ | |||
}} | }} |
Latest revision as of 18:32, 25 July 2015
Short description: | p@chr17:48263753..48263758, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48263753..48263758, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.74e-14 | 6 |
sensory epithelial cell | 2.74e-14 | 6 |
olfactory epithelial cell | 2.74e-14 | 6 |
mesenchymal stem cell of umbilical cord | 5.26e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.57e-10 | 1 |
respiratory system muscle | 1.57e-10 | 1 |
skeletal muscle of trunk | 1.57e-10 | 1 |
respiratory system skeletal muscle | 1.57e-10 | 1 |
thoracic segment muscle | 1.57e-10 | 1 |
chest organ | 1.57e-10 | 1 |
muscle of trunk | 1.57e-10 | 1 |
diaphragm | 1.57e-10 | 1 |
future diaphragm | 1.57e-10 | 1 |
umbilical cord | 6.67e-09 | 10 |
blastocyst | 6.67e-09 | 10 |
blastula | 6.67e-09 | 10 |
bilaminar disc | 6.67e-09 | 10 |
inner cell mass | 6.67e-09 | 10 |
cleaving embryo | 6.67e-09 | 10 |
connecting stalk | 6.67e-09 | 10 |
inner cell mass derived epiblast | 6.67e-09 | 10 |
extraembryonic mesoderm | 6.67e-09 | 10 |
mesenchyme of umbilical cord | 5.26e-07 | 6 |
omentum | 5.58e-07 | 6 |
peritoneum | 5.58e-07 | 6 |
abdominal cavity | 5.58e-07 | 6 |
visceral peritoneum | 5.58e-07 | 6 |