FFCP PHASE1:Hg19::chr17:5284799..5284803,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:5284799..5284803,+ | |||
|coexpression_cluster_id=C1002 | |coexpression_cluster_id=C1002 | ||
|description=CAGE_peak_at_chr17:5284799..5284803,+ | |description=CAGE_peak_at_chr17:5284799..5284803,+ | ||
|id=chr17:5284799..5284803,+ | |id=chr17:5284799..5284803,+ | ||
|ontology_enrichment_celltype=CL:0002596;2.88e-13;2!CL:0002601;7.75e-08;1 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002596;2.88e-13;2!CL:0002601;7.75e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002596,1.44e-13,2;CL:0002601,6.80e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;4.83e-33;15!UBERON:0000179;4.83e-33;15!UBERON:0000463;4.83e-33;15!UBERON:0002390;2.88e-17;32!UBERON:0005396;2.88e-13;2!UBERON:0002193;4.92e-12;42 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.69e-08!15;UBERON:0000179!8.69e-08!15;UBERON:0000463!8.69e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.83e-33;15!UBERON:0000179;4.83e-33;15!UBERON:0000463;4.83e-33;15!UBERON:0002390;2.88e-17;32!UBERON:0005396;2.88e-13;2!UBERON:0002193;4.92e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.81e-33,15;UBERON:0000179,3.81e-33,15;UBERON:0000463,3.81e-33,15;UBERON:0004535,7.53e-17,109;UBERON:0001009,2.71e-16,112;UBERON:0005396,1.44e-13,2;UBERON:0003081,2.28e-10,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.218441372130172,0,0.37129905888014,0,0,0,0,0,0.984968464614303,0,0.940364164434263,0.85870796139317,0,0.251085279189606,0.305653622991805,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.619737604642413,0.853015394924529,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0,0,0,0,0.580418477257168,0,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0.526768169550154,0.196709770113833,0,0,1.67186495390678,0,0,0,0.557052284425868,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.793165398882963,0.383220493601921,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0.371457501329565,1.59009925893364,0,1.04142150482278,0,0,0,0.626984899610432,0,0.35576626268671,0,0,0.760272105718513,0,0.367663080345869,0,0.535798369704479,0,0.112611480483322,1.53316637465883,1.89853131913626,0.183201743930407,0,0,0.872188104285069,0,0.633152558322899,0,0,0,0,1.06748995729705,0,0.622422070799533,0.134710672069688,0,0.302714855289863,0,0.937285727335186,0.312160076830321,0.570471821544449,0,0,0.323745888736263,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0,2.73048408581408,0,0.336672227908132,0,0,0,0,0,0.226864366320042,0,0.427114777637135,0.423863802319124,0,0.721367704669072,0,0.18611685633159,0,0.389748020644795,0,0.368199594569197,0.484938170456436,0,0.302256294682921,0.508681776931463,0.193260853163297,0,0.573609190778008,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.219500570817251,3.37205259772859,0,0.277765335475589,0.977424915930974,0,0,0.695582429850461,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0.283550194484773,0.268675568108545,0,0.383382679165211,0,0.176096868026452,0,0,0.12624243342638,0,0,0,1.71072446022705,0.102827492703324,0,0,0.448524337381443,0,0.66004457238855,0,10.7296933755565,0,0.797814349754612,2.08014873822732,1.02882949704857,0,0,0.428933980974443,1.08524321078289,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0.672510863961164,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,0,0.271265023699736,0,0,0.473107245101804,0,0,0,0,0,0,0.434418072340414,0.783204629850962,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0,0,0,0,0.574890092096664,0,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0,0.902399225814824,0.385076685522074,2.35304930753057,0,0.316654886678627,0,0.340187410553031,0,0,0.812839312631559,0,0.254876273045038,0,0.447749509444357,0.438519753291869,0.261435451024901,0,0.328014645699706,0.325378394664303,0,0,0.082509499920588,0,0,0,0.290012154876366,0,0,0.137836572484531,0.214840489736547,0,0.170453254832202,0.534192213880424,0.330569830721956,0,0,0,0,0,1.3940745403212,0.308033580176089,0.532306030317022,0.869932992075073,0.55597265731176,0,0,0,0,0.511795582622668,0,1.90921948755562,1.56989728039846,0.179872457583315,0,0,1.01091240786658,0,0.421258456238981,0.48763373908959,0,0,0.409499734223957,0,0,0.551365343546124,0,0,0,0.655894752046633,0.202910376962704,0,0,0.573645408816206,0.392996164052485,0,2.48332744849418,0.211107635297664,0,0.75894634753143,0,0.865999014529609,0,2.17781969722645,0,0,0,0,0,5.58192370155386,3.82318603571188,0.569647187174163,1.90585420366231,1.23408681925858,6.48473311192717,4.86028293514303,1.58625035258854,0.106824071127473,0,0.490080431962063,0.371606350251437,0.28853842595289,0.213425530045242,0.318852545457645,0,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0,0,0.296964680832639,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.102268682502155,0.369254416383208,0,0.179736702294654,0.179021174675609,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0.262379999988587,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.269272933229316,0,0,0.366390373607449,0,0,0,0,0,0,0,0.569261198172555,0.158936578980379,0,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,1.18608451472249,0.494255755786011,0.313265848516366,0,0,0,0.364909578431332,0,0.242780379534093,0,0,0,0.063186579628488,0.450970258243478,0.622129148383483,0,0,0,0,0,0.138674673013139,0,0,0.435296032902013,0.17472666824203,0.171986032471617,0.19351266257817,0.0730893170861856,0.246346371159628,0,0.617792886840502,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0.343609788497747,0,0,0,0,0.407712618220842,0,0.611989305817931,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.0674035438541849,0.295282444544246,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0.105600336519406,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.681552087141687,0.113312091520126,0,0,0,0,0.171086837884329,0.704815022316672,0,0.314408610199332,0,0,0.395223263795889,0.243585196761792,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0.39997479170986,0.533458648470704,0,0,0.368211900503681,0.279759015438889,0,0.255788742607303,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0.381382095467167,0.690359926060101,0.596748666348824,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0.333694205676207,0,0,0,0,0.215927591218621,0,0.0714765441766563,0.316027223465453,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0.588901401691458,0.121917924982269,0,0.102662806856247,0,0,0.233939463462106,0,0.118920090777569,0.22589216407792,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0.299823467774787,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0.18378979906969,0.250707539292375,1.43979526614655,0,0,0,0.213233981900981,0,0.193766729508018,0.372448285775147,0.112131862580613,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.325613074443898,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.218441372130172,0,0.37129905888014,0,0,0,0,0,0.984968464614303,0,0.940364164434263,0.85870796139317,0,0.251085279189606,0.305653622991805,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.619737604642413,0.853015394924529,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0,0,0,0,0.580418477257168,0,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0.526768169550154,0.196709770113833,0,0,1.67186495390678,0,0,0,0.557052284425868,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.793165398882963,0.383220493601921,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0.371457501329565,1.59009925893364,0,1.04142150482278,0,0,0,0.626984899610432,0,0.35576626268671,0,0,0.760272105718513,0,0.367663080345869,0,0.535798369704479,0,0.112611480483322,1.53316637465883,1.89853131913626,0.183201743930407,0,0,0.872188104285069,0,0.633152558322899,0,0,0,0,1.06748995729705,0,0.622422070799533,0.134710672069688,0,0.302714855289863,0,0.937285727335186,0.312160076830321,0.570471821544449,0,0,0.323745888736263,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0,2.73048408581408,0,0.336672227908132,0,0,0,0,0,0.226864366320042,0,0.427114777637135,0.423863802319124,0,0.721367704669072,0,0.18611685633159,0,0.389748020644795,0,0.368199594569197,0.484938170456436,0,0.302256294682921,0.508681776931463,0.193260853163297,0,0.573609190778008,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.219500570817251,3.37205259772859,0,0.277765335475589,0.977424915930974,0,0,0.695582429850461,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0.283550194484773,0.268675568108545,0,0.383382679165211,0,0.176096868026452,0,0,0.12624243342638,0,0,0,1.71072446022705,0.102827492703324,0,0,0.448524337381443,0,0.66004457238855,0,10.7296933755565,0,0.797814349754612,2.08014873822732,1.02882949704857,0,0,0.428933980974443,1.08524321078289,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0.672510863961164,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,0,0.271265023699736,0,0,0.473107245101804,0,0,0,0,0,0,0.434418072340414,0.783204629850962,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0,0,0,0,0.574890092096664,0,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0,0.902399225814824,0.385076685522074,2.35304930753057,0,0.316654886678627,0,0.340187410553031,0,0,0.812839312631559,0,0.254876273045038,0,0.447749509444357,0.438519753291869,0.261435451024901,0,0.328014645699706,0.325378394664303,0,0,0.082509499920588,0,0,0,0.290012154876366,0,0,0.137836572484531,0.214840489736547,0,0.170453254832202,0.534192213880424,0.330569830721956,0,0,0,0,0,1.3940745403212,0.308033580176089,0.532306030317022,0.869932992075073,0.55597265731176,0,0,0,0,0.511795582622668,0,1.90921948755562,1.56989728039846,0.179872457583315,0,0,1.01091240786658,0,0.421258456238981,0.48763373908959,0,0,0.409499734223957,0,0,0.551365343546124,0,0,0,0.655894752046633,0.202910376962704,0,0,0.573645408816206,0.392996164052485,0,2.48332744849418,0.211107635297664,0,0.75894634753143,0,0.865999014529609,0,2.17781969722645,0,0,0,0,0,5.58192370155386,3.82318603571188,0.569647187174163,1.90585420366231,1.23408681925858,6.48473311192717,4.86028293514303,1.58625035258854,0.106824071127473,0,0.490080431962063,0.371606350251437,0.28853842595289,0.213425530045242,0.318852545457645,0,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0,0,0.296964680832639,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.102268682502155,0.369254416383208,0,0.179736702294654,0.179021174675609,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0.262379999988587,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.269272933229316,0,0,0.366390373607449,0,0,0,0,0,0,0,0.569261198172555,0.158936578980379,0,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,1.18608451472249,0.494255755786011,0.313265848516366,0,0,0,0.364909578431332,0,0.242780379534093,0,0,0,0.063186579628488,0.450970258243478,0.622129148383483,0,0,0,0,0,0.138674673013139,0,0,0.435296032902013,0.17472666824203,0.171986032471617,0.19351266257817,0.0730893170861856,0.246346371159628,0,0.617792886840502,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0.343609788497747,0,0,0,0,0.407712618220842,0,0.611989305817931,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.0674035438541849,0.295282444544246,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0.105600336519406,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.681552087141687,0.113312091520126,0,0,0,0,0.171086837884329,0.704815022316672,0,0.314408610199332,0,0,0.395223263795889,0.243585196761792,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0.39997479170986,0.533458648470704,0,0,0.368211900503681,0.279759015438889,0,0.255788742607303,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0.381382095467167,0.690359926060101,0.596748666348824,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0.333694205676207,0,0,0,0,0.215927591218621,0,0.0714765441766563,0.316027223465453,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0.588901401691458,0.121917924982269,0,0.102662806856247,0,0,0.233939463462106,0,0.118920090777569,0.22589216407792,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0.299823467774787,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0.18378979906969,0.250707539292375,1.43979526614655,0,0,0,0.213233981900981,0,0.193766729508018,0.372448285775147,0.112131862580613,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.325613074443898,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr17:5284799..5284803,+ | |short_description=p@chr17:5284799..5284803,+ | ||
}} | }} |
Latest revision as of 18:59, 25 July 2015
Short description: | p@chr17:5284799..5284803, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:5284799..5284803, + |
Coexpression cluster: | C1002_Mesenchymal_Whole_Smooth_Renal_osteosarcoma_Fibroblast_Reticulocytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 1.44e-13 | 2 |
uterine smooth muscle cell | 6.80e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 3.81e-33 | 15 |
haemolymphatic fluid | 3.81e-33 | 15 |
organism substance | 3.81e-33 | 15 |
cardiovascular system | 7.53e-17 | 109 |
circulatory system | 2.71e-16 | 112 |
carotid artery segment | 1.44e-13 | 2 |
lateral plate mesoderm | 2.28e-10 | 203 |