UBERON:0003081
From FANTOM5_SSTAR
| Name: | lateral plate mesoderm | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Portion of the middle of the three primary germ layers of the embryo that resides on the periphery of the embryo, is continuous with the extra-embryonic mesoderm, splits into two layers enclosing the intra-embryonic coelom, and gives rise to body wall structures[MP]." [MP:0010117, Wikipedia:Lateral_plate_mesoderm] | ||
| Xrefs: |
| ||
| Synonyms: |
"lateral mesoderm" EXACT [GO:0048368] "lateral plate" RELATED [] "mesoderma laminae lateralis" RELATED LATIN [Wikipedia:Lateral_plate_mesoderm] | ||
| Alt_id: | UBERON:XAO_0000311-ZFA_0000121 | ||
| Subset: | uberon_slim |
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004120(mesoderm-derived structure),UBERON:0005291(embryonic tissue),UBERON:0007524(dense mesenchyme tissue) |
|---|---|
| develops_from: | UBERON:0000926(mesoderm) |
| part_of: | UBERON:0000926(mesoderm) |
Children
| develops from: | UBERON:0003061 (blood island),UBERON:0003084 (heart primordium),UBERON:0003887 (intraembryonic coelom),UBERON:0004381 (skeleton of limb),UBERON:0005728 (extraembryonic mesoderm),UBERON:0011582 (paired limb/fin skeleton) |
|---|---|
| part of: | UBERON:0004140 (primary heart field),UBERON:0004871 (somatic layer of lateral plate mesoderm),UBERON:0004872 (splanchnic layer of lateral plate mesoderm),UBERON:0004874 (somatopleure),UBERON:0005732 (limb/fin field),UBERON:0006258 (lateral plate mesenchyme),UBERON:0009881 (anterior lateral plate mesoderm) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003081 (lateral plate mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.25e-50 | FFCP PHASE2:Hg19::chrX:153637522..153637533,-#_dbd8038870c12e5693b6e6e6f56f8dc7 | p4@DNASE1L1 |
| 2.25e-50 | FFCP PHASE1:Hg19::chrX:153637522..153637533,-#_dbd8038870c12e5693b6e6e6f56f8dc7 | p4@DNASE1L1 |
| 7.07e-50 | FFCP PHASE2:Hg19::chrX:153637534..153637567,-#_f7f443f46c32ec415b97e5a2aa785767 | p1@DNASE1L1 |
| 7.07e-50 | FFCP PHASE1:Hg19::chrX:153637534..153637567,-#_f7f443f46c32ec415b97e5a2aa785767 | p1@DNASE1L1 |
| 6.88e-49 | FFCP PHASE2:Hg19::chr10:31288370..31288393,-#_a2eebd831a9fbfb6928f5a189d01616e | p3@ZNF438 |
| 6.88e-49 | FFCP PHASE1:Hg19::chr10:31288370..31288393,-#_a2eebd831a9fbfb6928f5a189d01616e | p3@ZNF438 |
| 1.53e-48 | FFCP PHASE2:Hg19::chr3:50273625..50273655,+#_2f0842eaeec319494043b69337ab6c92 | p1@GNAI2 |
| 1.53e-48 | FFCP PHASE1:Hg19::chr3:50273625..50273655,+#_2f0842eaeec319494043b69337ab6c92 | p1@GNAI2 |
| 2.09e-47 | FFCP PHASE1:Hg19::chr15:75871275..75871295,-#_a086ead6e1448e9369f923fc0fc5c440 | p4@PTPN9 |
| 2.09e-47 | FFCP PHASE2:Hg19::chr15:75871275..75871295,-#_a086ead6e1448e9369f923fc0fc5c440 | p4@PTPN9 |
| 5.83e-47 | FFCP PHASE1:Hg19::chr3:69402726..69402747,-#_09afad11ad645117b799b9cc1aa6fccf | p6@FRMD4B |
| 5.83e-47 | FFCP PHASE2:Hg19::chr3:69402726..69402747,-#_09afad11ad645117b799b9cc1aa6fccf | p6@FRMD4B |
| 5.57e-46 | FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_64cd5f76f2918ce3e24567425dc6c434 | p@chr16:50313426..50313459, + |
| 5.57e-46 | FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_64cd5f76f2918ce3e24567425dc6c434 | p@chr16:50313426..50313459, + |
| 1.38e-45 | FFCP PHASE2:Hg19::chr20:23067005..23067021,-#_f803be2db351d5e95855506d01d4b376 | p2@CD93 |
| 1.38e-45 | FFCP PHASE1:Hg19::chr20:23067005..23067021,-#_f803be2db351d5e95855506d01d4b376 | p2@CD93 |
| 1.41e-45 | FFCP PHASE1:Hg19::chr10:31288329..31288353,-#_65e7f3eb0a9f2473a9cad4b8f4f491ec | p7@ZNF438 |
| 1.41e-45 | FFCP PHASE2:Hg19::chr10:31288329..31288353,-#_65e7f3eb0a9f2473a9cad4b8f4f491ec | p7@ZNF438 |
| 3.68e-45 | FFCP PHASE1:Hg19::chr8:38663025..38663040,+#_c304fdbdfa4a3a773acb138b664adf91 | p15@TACC1 |
| 3.68e-45 | FFCP PHASE2:Hg19::chr8:38663025..38663040,+#_c304fdbdfa4a3a773acb138b664adf91 | p15@TACC1 |
| 8.24e-45 | FFCP PHASE2:Hg19::chr4:103747936..103747993,-#_62398bb3a8c0659d831c663ddb204b6d | p6@UBE2D3 |
| 8.24e-45 | FFCP PHASE1:Hg19::chr4:103747936..103747993,-#_62398bb3a8c0659d831c663ddb204b6d | p6@UBE2D3 |
| 8.31e-45 | FFCP PHASE1:Hg19::chr19:54784461..54784484,-#_8c9dda374901ab4fcf003cab0861fff2 | p2@LILRB2 |
| 8.31e-45 | FFCP PHASE2:Hg19::chr19:54784461..54784484,-#_8c9dda374901ab4fcf003cab0861fff2 | p2@LILRB2 |
| 8.95e-45 | FFCP PHASE2:Hg19::chr6:134694635..134694653,-#_2cb9d807c167755f151c18d0ae665636 | p@chr6:134694635..134694653, - |
| 8.95e-45 | FFCP PHASE1:Hg19::chr6:134694635..134694653,-#_2cb9d807c167755f151c18d0ae665636 | p@chr6:134694635..134694653, - |
| 1.04e-44 | FFCP PHASE2:Hg19::chr6:30653819..30653835,-#_262115374de766c53ad720a33ba57245 | p10@PPP1R18 |
| 1.04e-44 | FFCP PHASE1:Hg19::chr6:30653819..30653835,-#_262115374de766c53ad720a33ba57245 | p10@PPP1R18 |
| 2.36e-44 | FFCP PHASE2:Hg19::chr1:150724282..150724308,-#_94683397115456a49800a8396cf9f2a4 | p8@CTSS |
| 2.36e-44 | FFCP PHASE1:Hg19::chr1:150724282..150724308,-#_94683397115456a49800a8396cf9f2a4 | p8@CTSS |
| 3.24e-44 | FFCP PHASE1:Hg19::chr3:69402828..69402852,-#_60643d362291f678545994522d594b70 | p8@FRMD4B |
| 3.24e-44 | FFCP PHASE2:Hg19::chr3:69402828..69402852,-#_60643d362291f678545994522d594b70 | p8@FRMD4B |
| 6.06e-44 | FFCP PHASE2:Hg19::chr17:7077765..7077789,-#_5c33f2306441160728cc2269393f0c13 | p@chr17:7077765..7077789, - |
| 6.06e-44 | FFCP PHASE1:Hg19::chr17:7077765..7077789,-#_5c33f2306441160728cc2269393f0c13 | p@chr17:7077765..7077789, - |
| 9.49e-44 | FFCP PHASE1:Hg19::chr2:119726719..119726744,+#_134550ef7b9b5d646f3096168a2e43ef | p@chr2:119726719..119726744, + |
| 9.49e-44 | FFCP PHASE2:Hg19::chr2:119726719..119726744,+#_134550ef7b9b5d646f3096168a2e43ef | p@chr2:119726719..119726744, + |
| 1.94e-43 | FFCP PHASE2:Hg19::chr1:17944856..17944906,+#_bf88457975c199be86b028826c970dee | p3@ARHGEF10L |
| 1.94e-43 | FFCP PHASE1:Hg19::chr1:17944856..17944906,+#_bf88457975c199be86b028826c970dee | p3@ARHGEF10L |
| 3.01e-43 | FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_1de9fdf4e86a7de1cbc264aabfc7e58b | p1@CYP1B1-AS1 |
| 3.01e-43 | FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_1de9fdf4e86a7de1cbc264aabfc7e58b | p1@CYP1B1-AS1 |
| 5.01e-43 | FFCP PHASE2:Hg19::chr10:20105868..20105875,+#_53690ad4147bb3e0c58a9dabdd15104c | p8@PLXDC2 |
| 5.01e-43 | FFCP PHASE1:Hg19::chr10:20105868..20105875,+#_53690ad4147bb3e0c58a9dabdd15104c | p8@PLXDC2 |
| 5.09e-43 | FFCP PHASE1:Hg19::chr1:1711415..1711426,-#_a6098b3e64c84b84eef974ac5ab3c9ac | p4@NADK |
| 5.09e-43 | FFCP PHASE2:Hg19::chr1:1711415..1711426,-#_a6098b3e64c84b84eef974ac5ab3c9ac | p4@NADK |
| 5.41e-43 | FFCP PHASE1:Hg19::chr19:47823947..47823977,+#_1a702e3365cc427e120bc55ce4ecb35f | p@chr19:47823947..47823977, + |
| 5.41e-43 | FFCP PHASE2:Hg19::chr19:47823947..47823977,+#_1a702e3365cc427e120bc55ce4ecb35f | p@chr19:47823947..47823977, + |
| 8.82e-43 | FFCP PHASE1:Hg19::chr7:99971180..99971191,+#_856886eea70b7d295f4525c4cbee7a63 | p3@PILRA |
| 8.82e-43 | FFCP PHASE2:Hg19::chr7:99971180..99971191,+#_856886eea70b7d295f4525c4cbee7a63 | p3@PILRA |
| 1.8e-42 | FFCP PHASE1:Hg19::chr10:97457378..97457404,+#_ae46b3c81b576a02f90fa065e6053d89 | p@chr10:97457378..97457404, + |
| 1.8e-42 | FFCP PHASE2:Hg19::chr10:97457378..97457404,+#_ae46b3c81b576a02f90fa065e6053d89 | p@chr10:97457378..97457404, + |
| 2.49e-42 | FFCP PHASE1:Hg19::chr21:37802374..37802391,-#_6520ace73734c7b64d3f80aeb63b940c | p@chr21:37802374..37802391, - |
| 2.49e-42 | FFCP PHASE2:Hg19::chr21:37802374..37802391,-#_6520ace73734c7b64d3f80aeb63b940c | p@chr21:37802374..37802391, - |
| 3.17e-42 | FFCP PHASE1:Hg19::chr9:120466650..120466659,+#_c0d8acd46bad509e7fba9274ae621f62 | p6@TLR4 |
| 3.17e-42 | FFCP PHASE2:Hg19::chr9:120466650..120466659,+#_c0d8acd46bad509e7fba9274ae621f62 | p6@TLR4 |
| 5.49e-42 | FFCP PHASE1:Hg19::chr2:71295766..71295788,+#_15431ba439bc11a4b22ca6979a36ac0a | p1@NAGK |
| 5.49e-42 | FFCP PHASE2:Hg19::chr2:71295766..71295788,+#_15431ba439bc11a4b22ca6979a36ac0a | p1@NAGK |
| 6.5e-42 | FFCP PHASE1:Hg19::chr19:41859814..41859837,-#_04f16e4a62bf9efd414e6fc1b84acf39 | p1@TGFB1 |
| 6.5e-42 | FFCP PHASE2:Hg19::chr19:41859814..41859837,-#_04f16e4a62bf9efd414e6fc1b84acf39 | p1@TGFB1 |
| 6.65e-42 | FFCP PHASE1:Hg19::chr19:18283959..18283993,+#_e5e709a1a82cbaf33dec5309089cdf90 | p@chr19:18283959..18283993, + |
| 6.65e-42 | FFCP PHASE2:Hg19::chr19:18283959..18283993,+#_e5e709a1a82cbaf33dec5309089cdf90 | p@chr19:18283959..18283993, + |
| 8.29e-42 | FFCP PHASE1:Hg19::chr5:156534291..156534357,-#_641e3b47bfdf3b888b0ed7637c0f6162 | p4@HAVCR2 |
| 8.29e-42 | FFCP PHASE2:Hg19::chr5:156534291..156534357,-#_641e3b47bfdf3b888b0ed7637c0f6162 | p4@HAVCR2 |
| 8.45e-42 | FFCP PHASE2:Hg19::chr7:139586209..139586213,+#_705d59a69af5404cf73c62cc62f171e0 | p@chr7:139586209..139586213, + |
| 8.45e-42 | FFCP PHASE1:Hg19::chr7:139586209..139586213,+#_705d59a69af5404cf73c62cc62f171e0 | p@chr7:139586209..139586213, + |
| 9.34e-42 | FFCP PHASE2:Hg19::chr8:90770100..90770114,+#_e83b4d207d948425dac13b33732465e8 | p2@RIPK2 |
| 9.34e-42 | FFCP PHASE1:Hg19::chr8:90770100..90770114,+#_e83b4d207d948425dac13b33732465e8 | p2@RIPK2 |
| 1.14e-41 | FFCP PHASE1:Hg19::chr1:150705526..150705571,-#_458423e6b1f221eeac202c9e62642756 | p@chr1:150705526..150705571, - |
| 1.14e-41 | FFCP PHASE2:Hg19::chr1:150705526..150705571,-#_458423e6b1f221eeac202c9e62642756 | p@chr1:150705526..150705571, - |
| 1.14e-41 | FFCP PHASE1:Hg19::chr10:70847852..70847873,+#_458423e6b1f221eeac202c9e62642756 | p1@SRGN |
| 1.14e-41 | FFCP PHASE2:Hg19::chr10:70847852..70847873,+#_458423e6b1f221eeac202c9e62642756 | p1@SRGN |
| 1.16e-41 | FFCP PHASE2:Hg19::chr22:22307182..22307197,-#_c038e04590d965e0ece0480c7d543c30 | p2@PPM1F |
| 1.16e-41 | FFCP PHASE1:Hg19::chr22:22307182..22307197,-#_c038e04590d965e0ece0480c7d543c30 | p2@PPM1F |
| 1.4e-41 | FFCP PHASE2:Hg19::chr2:201994123..201994147,+#_4c6337844b902b616ca5160286e3c0a9 | p9@CFLAR |
| 1.4e-41 | FFCP PHASE1:Hg19::chr2:201994123..201994147,+#_4c6337844b902b616ca5160286e3c0a9 | p9@CFLAR |
| 1.5e-41 | FFCP PHASE2:Hg19::chr9:137808181..137808200,+#_60d4f9cecccecb2b910e726ec3dc71dc | p@chr9:137808181..137808200, + |
| 1.5e-41 | FFCP PHASE1:Hg19::chr9:137808181..137808200,+#_60d4f9cecccecb2b910e726ec3dc71dc | p@chr9:137808181..137808200, + |
| 1.59e-41 | FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_89f4858c689e7430e61cb5dce66badc7 | p7@EMILIN2 |
| 1.59e-41 | FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_89f4858c689e7430e61cb5dce66badc7 | p7@EMILIN2 |
| 1.77e-41 | FFCP PHASE2:Hg19::chr5:79442172..79442212,-#_1851a3fbe2656b5ef5e3974ff09c95fa | p@chr5:79442172..79442212, - |
| 1.77e-41 | FFCP PHASE1:Hg19::chr5:79442172..79442212,-#_1851a3fbe2656b5ef5e3974ff09c95fa | p@chr5:79442172..79442212, - |
| 2.21e-41 | FFCP PHASE1:Hg19::chr14:92927376..92927396,+#_cd76e3219ae774de331bb013e30f057d | p@chr14:92927376..92927396, + |
| 2.21e-41 | FFCP PHASE2:Hg19::chr14:92927376..92927396,+#_cd76e3219ae774de331bb013e30f057d | p@chr14:92927376..92927396, + |
| 2.4e-41 | FFCP PHASE1:Hg19::chr17:72542163..72542182,-#_69c21e96ae40e107cd6e2dd53359118e | p2@CD300C |
| 2.4e-41 | FFCP PHASE2:Hg19::chr17:72542163..72542182,-#_69c21e96ae40e107cd6e2dd53359118e | p2@CD300C |
| 2.73e-41 | FFCP PHASE1:Hg19::chr19:18288780..18288808,+#_859db18a981220b55efe7ef4d8dec885 | p4@IFI30 |
| 2.73e-41 | FFCP PHASE2:Hg19::chr19:18288780..18288808,+#_859db18a981220b55efe7ef4d8dec885 | p4@IFI30 |
| 2.91e-41 | FFCP PHASE1:Hg19::chr7:44084744..44084800,-#_9cc50f0e4c32f8adc2b8b5b7ad3beeb2 | p@chr7:44084744..44084800, - |
| 2.91e-41 | FFCP PHASE2:Hg19::chr7:44084744..44084800,-#_9cc50f0e4c32f8adc2b8b5b7ad3beeb2 | p@chr7:44084744..44084800, - |
| 4.26e-41 | FFCP PHASE1:Hg19::chrX:80458085..80458112,+#_94d5734999df06434c58d29b228b0987 | p7@SH3BGRL |
| 4.26e-41 | FFCP PHASE2:Hg19::chrX:80458085..80458112,+#_94d5734999df06434c58d29b228b0987 | p7@SH3BGRL |
| 5.57e-41 | FFCP PHASE1:Hg19::chr14:23288956..23289020,-#_e22bf949b6455a1afb680bae0195c0c8 | p3@SLC7A7 |
| 5.57e-41 | FFCP PHASE2:Hg19::chr14:23288956..23289020,-#_e22bf949b6455a1afb680bae0195c0c8 | p3@SLC7A7 |
| 5.77e-41 | FFCP PHASE2:Hg19::chr14:103587759..103587770,+#_dd8590f311e58f6242c19b74cb1e2130 | p@chr14:103587759..103587770, + |
| 5.77e-41 | FFCP PHASE1:Hg19::chr14:103587759..103587770,+#_dd8590f311e58f6242c19b74cb1e2130 | p@chr14:103587759..103587770, + |
| 6.2e-41 | FFCP PHASE2:Hg19::chrX:152086449..152086473,+#_37b451f68f2c7d3dcdce7bd11b729466 | p4@ZNF185 |
| 6.2e-41 | FFCP PHASE1:Hg19::chrX:152086449..152086473,+#_37b451f68f2c7d3dcdce7bd11b729466 | p4@ZNF185 |
| 6.56e-41 | FFCP PHASE2:Hg19::chr3:194299051..194299068,+#_ffa402a92a307509cc4182a64f26e601 | p@chr3:194299051..194299068, + |
| 6.56e-41 | FFCP PHASE1:Hg19::chr3:194299051..194299068,+#_ffa402a92a307509cc4182a64f26e601 | p@chr3:194299051..194299068, + |
| 7.48e-41 | FFCP PHASE2:Hg19::chr11:47380465..47380487,-#_6b9082a2e040da7596d86a398d6d8b35 | p@chr11:47380465..47380487, - |
| 7.48e-41 | FFCP PHASE1:Hg19::chr11:47380465..47380487,-#_6b9082a2e040da7596d86a398d6d8b35 | p@chr11:47380465..47380487, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of mesoderm traditionally thought to give rise to limb bones and parts of the girdles.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
