FFCP PHASE1:Hg19::chr17:57885497..57885511,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:57885497..57885511,+ | |||
|description=CAGE_peak_at_chr17:57885497..57885511,+ | |description=CAGE_peak_at_chr17:57885497..57885511,+ | ||
|id=chr17:57885497..57885511,+ | |id=chr17:57885497..57885511,+ | ||
|ontology_enrichment_celltype=CL:0000057!7.00e-14!75;CL:0002334!7.98e-14!12;CL:0002620!8.22e-09!23;CL:0000055!3.58e-08!180;CL:0000136!3.54e-07!15;CL:0000134!5.19e-07!358;CL:0002615!5.25e-07!3;CL:0000153!7.09e-07!9;CL:0000447!7.09e-07!9;CL:0002580!7.36e-07!3;CL:0002579!8.54e-07!3 | |ontology_enrichment_celltype=CL:0000057!7.00e-14!75;CL:0002334!7.98e-14!12;CL:0002620!8.22e-09!23;CL:0000055!3.58e-08!180;CL:0000136!3.54e-07!15;CL:0000134!5.19e-07!358;CL:0002615!5.25e-07!3;CL:0000153!7.09e-07!9;CL:0000447!7.09e-07!9;CL:0002580!7.36e-07!3;CL:0002579!8.54e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.93e-24;12!CL:0002615;6.33e-20;3!CL:0002580;3.63e-19;3!CL:0002579;4.79e-19;3!CL:0000136;4.20e-17;13!CL:0002617;1.04e-13;2!CL:0002620;6.13e-09;23!CL:0000511;6.59e-08;1!CL:0002625;6.59e-08;1!CL:0000216;6.59e-08;1!CL:0002616;1.56e-07;1!CL:0002581;3.20e-07;1!CL:0002570;3.57e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.73e-24,12;CL:0002615,7.90e-20,3;CL:0000136,1.51e-19,15;CL:0002580,2.43e-19,3;CL:0002579,3.99e-19,3;CL:0002617,1.10e-13,2;CL:0000057,7.56e-13,76;CL:0002620,5.25e-09,23;CL:0000134,3.71e-08,354;CL:0000511,6.59e-08,1;CL:0002625,6.59e-08,1;CL:0000216,6.59e-08,1;CL:0002320,6.83e-08,361;CL:0000219,9.55e-08,386;CL:0002616,1.61e-07,1;CL:0002581,3.01e-07,1;CL:0002570,4.93e-07,8;CL:0000153,8.66e-07,9;CL:0000447,8.66e-07,9;CL:0000327,9.88e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.48e-09!5;DOID:450!1.48e-09!5;DOID:66!1.48e-09!5;DOID:423!1.48e-09!5;DOID:0080000!1.48e-09!5;DOID:11722!1.48e-09!5 | |ontology_enrichment_disease=DOID:17!1.48e-09!5;DOID:450!1.48e-09!5;DOID:66!1.48e-09!5;DOID:423!1.48e-09!5;DOID:0080000!1.48e-09!5;DOID:11722!1.48e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.26e-11;5!DOID:450;2.26e-11;5!DOID:66;2.26e-11;5!DOID:423;2.26e-11;5!DOID:0080000;2.26e-11;5!DOID:11722;2.26e-11;5!DOID:2513;1.56e-07;1!DOID:3571;3.20e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.39e-11,5;DOID:450,1.39e-11,5;DOID:66,1.39e-11,5;DOID:423,1.39e-11,5;DOID:0080000,1.39e-11,5;DOID:11722,1.39e-11,5;DOID:2513,1.51e-07,1;DOID:3571,3.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.73e-12!6;UBERON:0002358!3.73e-12!6;UBERON:0003684!3.73e-12!6;UBERON:0001178!3.73e-12!6;UBERON:0004457!1.30e-11!12;UBERON:0000042!1.30e-11!12;UBERON:0002384!3.52e-07!375;UBERON:0001013!5.14e-07!14 | |ontology_enrichment_uberon=UBERON:0003688!3.73e-12!6;UBERON:0002358!3.73e-12!6;UBERON:0003684!3.73e-12!6;UBERON:0001178!3.73e-12!6;UBERON:0004457!1.30e-11!12;UBERON:0000042!1.30e-11!12;UBERON:0002384!3.52e-07!375;UBERON:0001013!5.14e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.65e-37;6!UBERON:0002358;3.65e-37;6!UBERON:0003684;3.65e-37;6!UBERON:0001178;3.65e-37;6!UBERON:0004457;2.98e-33;9!UBERON:0000042;2.98e-33;9!UBERON:0000310;1.81e-15;10!UBERON:0001443;4.81e-14;11!UBERON:0005406;4.46e-13;2!UBERON:0001013;1.80e-10;14!UBERON:0001136;6.59e-08;1!UBERON:0001343;6.59e-08;1!UBERON:0004910;6.59e-08;1!UBERON:0004813;6.59e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.79e-37,6;UBERON:0002358,3.79e-37,6;UBERON:0003684,3.79e-37,6;UBERON:0001178,3.79e-37,6;UBERON:0004457,9.09e-25,12;UBERON:0000042,9.09e-25,12;UBERON:0000310,1.54e-15,10;UBERON:0001443,4.15e-14,11;UBERON:0005406,4.33e-13,2;UBERON:0001013,2.43e-10,14;UBERON:0001136,6.59e-08,1;UBERON:0001343,6.59e-08,1;UBERON:0004910,6.59e-08,1;UBERON:0005154,6.59e-08,1;UBERON:0005295,6.59e-08,1;UBERON:0004813,6.59e-08,1;UBERON:0005297,6.59e-08,1;UBERON:0005294,6.59e-08,1;UBERON:0010141,6.59e-08,1;UBERON:0005891,6.59e-08,1;UBERON:0002384,1.57e-07,371;UBERON:0004458,4.80e-07,49;UBERON:0009569,9.11e-07,112 | |||
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| ||
|short_description=p@chr17:57885497..57885511,+ | |short_description=p@chr17:57885497..57885511,+ | ||
}} | }} |
Latest revision as of 19:28, 25 July 2015
Short description: | p@chr17:57885497..57885511, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:57885497..57885511, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.73e-24 | 12 |
adipocyte of omentum tissue | 7.90e-20 | 3 |
fat cell | 1.51e-19 | 15 |
preadipocyte of the breast | 2.43e-19 | 3 |
omentum preadipocyte | 3.99e-19 | 3 |
adipocyte of breast | 1.10e-13 | 2 |
fibroblast | 7.56e-13 | 76 |
skin fibroblast | 5.25e-09 | 23 |
mesenchymal cell | 3.71e-08 | 354 |
androgen binding protein secreting cell | 6.59e-08 | 1 |
seminiferous tubule epithelial cell | 6.59e-08 | 1 |
Sertoli cell | 6.59e-08 | 1 |
connective tissue cell | 6.83e-08 | 361 |
motile cell | 9.55e-08 | 386 |
perirenal adipocyte cell | 1.61e-07 | 1 |
perirenal preadipocyte | 3.01e-07 | 1 |
mesenchymal stem cell of adipose | 4.93e-07 | 8 |
GAG secreting cell | 8.66e-07 | 9 |
carbohydrate secreting cell | 8.66e-07 | 9 |
extracellular matrix secreting cell | 9.88e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.79e-37 | 6 |
peritoneum | 3.79e-37 | 6 |
abdominal cavity | 3.79e-37 | 6 |
visceral peritoneum | 3.79e-37 | 6 |
cavity lining | 9.09e-25 | 12 |
serous membrane | 9.09e-25 | 12 |
breast | 1.54e-15 | 10 |
chest | 4.15e-14 | 11 |
perirenal fat | 4.33e-13 | 2 |
adipose tissue | 2.43e-10 | 14 |
mesothelium | 6.59e-08 | 1 |
seminiferous tubule of testis | 6.59e-08 | 1 |
epithelium of male gonad | 6.59e-08 | 1 |
epithelial cord | 6.59e-08 | 1 |
sex cord | 6.59e-08 | 1 |
seminiferous tubule epithelium | 6.59e-08 | 1 |
testis sex cord | 6.59e-08 | 1 |
genital ridge | 6.59e-08 | 1 |
primitive sex cord of indifferent gonad | 6.59e-08 | 1 |
coelomic epithelium | 6.59e-08 | 1 |
connective tissue | 1.57e-07 | 371 |
body cavity or lining | 4.80e-07 | 49 |
subdivision of trunk | 9.11e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.39e-11 | 5 |
myotonic disease | 1.39e-11 | 5 |
muscle tissue disease | 1.39e-11 | 5 |
myopathy | 1.39e-11 | 5 |
muscular disease | 1.39e-11 | 5 |
myotonic dystrophy | 1.39e-11 | 5 |
basal cell carcinoma | 1.51e-07 | 1 |
liver cancer | 3.40e-07 | 1 |