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DOID:3571

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Name:liver cancer
Namespace:FANTOM
Definition:"A gastrointestinal system cancer that is located_in the liver." [url:http://en.wikipedia.org/wiki/Liver]
Xrefs:
links:

MSH:D008113
SNOMEDCT_2010_1_31:126851005
SNOMEDCT_2010_1_31:154470007
SNOMEDCT_2010_1_31:187768001
SNOMEDCT_2010_1_31:187771009
SNOMEDCT_2010_1_31:187779006
SNOMEDCT_2010_1_31:269548006
SNOMEDCT_2010_1_31:363361004
SNOMEDCT_2010_1_31:93870000
SNOMEDCT_2010_1_31:95214007
UMLS_CUI:C0023903
UMLS_CUI:C0024620
UMLS_CUI:C0345904
UMLS_CUI:C0854795
UMLS_CUI:C0861869

UMLS_CUI:C1334590
Synonyms: "ca liver - primary" EXACT []
"Ca liver - primary (disorder)" EXACT [SNOMEDCT_2005_07_31:269548006]
"hepatic cancer" EXACT [CSP2005:2003-2810]
"hepatic neoplasm" EXACT [CSP2005:2003-2810]
"malignant hepato-biliary neoplasm" EXACT []
"malignant neoplasm of liver" EXACT []
"malignant neoplasm of liver (disorder)" EXACT [SNOMEDCT_2005_07_31:93870000]
"malignant neoplasm of liver unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:187779006]
"malignant neoplasm of liver, not specified as primary or secondary" EXACT [ICD9CM_2006:155.2]
"malignant neoplasm of liver, primary" EXACT [ICD9CM_2006:155.0]
"malignant tumor of liver (disorder)" EXACT [SNOMEDCT_2005_07_31:363361004]
"neoplasm of liver (disorder)" EXACT [SNOMEDCT_2005_07_31:126851005]
"non-resectable primary hepatic malignant neoplasm" EXACT []
"primary liver cancer" EXACT []
"primary malignant neoplasm of Liver" EXACT [NCI2004_11_17:C34803]
"primary malignant neoplasm of liver" EXACT [SNOMEDCT_2005_07_31:187768001, SNOMEDCT_2005_07_31:93870000]
"primary malignant neoplasm of liver (disorder)" EXACT [SNOMEDCT_2005_07_31:95214007]
"primary malignant neoplasm of liver NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:187771009]
"Resectable malignant neoplasm of Liver" EXACT [NCI2004_11_17:C7692]
"resectable malignant neoplasm of the liver" EXACT []
Alt_id: DOID:12300
DOID:269
DOID:7330
DOID:915
DOID:919

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:3119(gastrointestinal system cancer)



Children


is a:FF:10778-110G4 (hepatic mesenchymal tumor cell line:LI90),DOID:686 (liver carcinoma),DOID:687 (hepatoblastoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3571 (liver cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data