FFCP PHASE1:Hg19::chr17:8924926..8924945,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:8924926..8924945,+
|short_description=p@chr17:8924926..8924945,+
|description=CAGE_peak_at_chr17:8924926..8924945,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:8924926..8924945,+ | |||
|coexpression_cluster_id=C2449 | |||
|description=CAGE_peak_at_chr17:8924926..8924945,+ | |||
|id=chr17:8924926..8924945,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000128;5.56e-07;7!CL:0000126;5.56e-07;7!CL:0000127;5.56e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.92e-07,7;CL:0000126,5.92e-07,7;CL:0000127,5.92e-07,7;CL:0002453,5.92e-07,7;CL:0002605,7.90e-07,3;CL:0000135,9.07e-07,3;CL:0000388,9.07e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-30!115;UBERON:0001017!6.76e-21!82;UBERON:0005743!4.15e-20!86;UBERON:0001049!1.49e-19!57;UBERON:0005068!1.49e-19!57;UBERON:0006241!1.49e-19!57;UBERON:0007135!1.49e-19!57;UBERON:0000073!2.96e-18!94;UBERON:0001016!2.96e-18!94;UBERON:0004121!1.51e-16!169;UBERON:0000924!1.77e-16!173;UBERON:0006601!1.77e-16!173;UBERON:0000955!5.01e-16!69;UBERON:0006238!5.01e-16!69;UBERON:0002616!9.95e-15!59;UBERON:0000062!1.79e-13!511;UBERON:0000153!5.56e-13!129;UBERON:0007811!5.56e-13!129;UBERON:0003075!8.92e-13!86;UBERON:0007284!8.92e-13!86;UBERON:0002346!1.49e-12!90;UBERON:0000033!2.50e-12!123;UBERON:0002020!6.41e-12!34;UBERON:0003528!6.41e-12!34;UBERON:0003080!7.62e-12!42;UBERON:0001893!2.39e-11!34;UBERON:0002780!3.34e-11!41;UBERON:0001890!3.34e-11!41;UBERON:0006240!3.34e-11!41;UBERON:0002791!5.34e-11!33;UBERON:0001869!2.36e-10!32;UBERON:0000468!7.73e-10!659;UBERON:0003076!1.26e-09!15;UBERON:0003057!1.26e-09!15;UBERON:0000922!4.24e-09!612;UBERON:0000467!2.23e-08!625;UBERON:0000064!2.44e-08!219;UBERON:0000480!2.86e-08!626;UBERON:0002050!4.44e-08!605;UBERON:0005423!4.44e-08!605;UBERON:0000923!9.38e-08!604;UBERON:0005291!9.38e-08!604;UBERON:0006598!9.38e-08!604;UBERON:0002532!9.38e-08!604;UBERON:0002298!1.63e-07!8;UBERON:0004733!1.78e-07!12;UBERON:0002028!1.78e-07!12;UBERON:0007277!1.78e-07!12;UBERON:0000956!3.27e-07!25;UBERON:0000203!3.27e-07!25;UBERON:0002308!8.81e-07!9;UBERON:0000125!8.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.80e-11;6!UBERON:0004733;4.46e-09;12!UBERON:0002028;4.46e-09;12!UBERON:0004732;2.91e-08;13!UBERON:0004921;4.44e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.11e-19,114;UBERON:0003076,1.56e-13,15;UBERON:0003057,1.56e-13,15;UBERON:0002298,1.25e-11,6;UBERON:0004733,2.81e-09,12;UBERON:0002028,2.81e-09,12;UBERON:0007277,2.81e-09,12;UBERON:0011216,1.05e-08,223;UBERON:0004732,1.91e-08,13;UBERON:0004121,4.53e-07,171;UBERON:0000924,4.53e-07,171;UBERON:0006601,4.53e-07,171;UBERON:0001017,7.67e-07,81;UBERON:0000988,9.07e-07,3;UBERON:0007846,9.07e-07,3;UBERON:0000043,9.07e-07,3;UBERON:0007845,9.07e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,3.48900583986214,0.218441372130172,0,0.123766352960047,0,0,0,0,0,1.10808952269109,0.612002073732759,3.76145665773705,4.29353980696585,2.6006140763848,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0.103325781175765,14.2560342873846,2.22540236350701,0,0,0.168336113954066,0,0,0,0,5.85928429735728,0,0.179389635688862,0,0.635795703478686,0,0,0,0,0,0.0974370051611986,0,0.460249493211497,1.45481451136931,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,3.12899064659632,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.491953754172454,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,2.37061319387782,0,0,0,0,0,1.6798212819886,0.141775097242386,0.179117045405697,1.16253575405585,3.06706143332169,0,0,0.621984346622316,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,1.30139853857622,0.773288812777695,2.34522771468088,0.637938751653163,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0.686286847621712,0,0,0,0.303127571446259,0,1.20956117331872,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.362578348774867,0.40101294060657,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.9273691048295,0.27470839445503,0.165018999841176,0,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44430541190656,12.1839110395164,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0.144269212976445,0,0.159426272728822,0,0,0,0.324621940274555,0.561594356226918,0,0,0,1.86220955581764,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0.835218521685727,0,0.540911356951966,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0.296964680832639,0,0,0.703347082052564,5.56543525114529,0,0,6.77443160053637,1.38141957765574,0,0.306806047506464,0,0,0,0,0,0.690503839458535,0,0,1.93866549219044,0.927680981618513,1.99613798001194,1.04171104434093,0,2.17499872630438,0,0.508507300585533,0,0,0,1.21537496453305,0.885741385813839,0.964771509003264,0,0.552896299656123,0.295547618953547,0.658156191461918,0,0.83654246567162,2.00070672109872,0.683652335082007,2.07507513949254,0.807818799687949,0.217294743844016,0.957003479195758,0,0,0,0,0.997270091400938,0,0,0,0,0,0,0.652931232636591,0,0,3.98104772431402,2.56526937059684,1.22206028986725,0,0.494255755786011,0.104421949505455,0.943615861729479,1.60515529459758,0.468528891450678,0,0.19566461893209,0.242780379534093,0.394584402849391,1.20990716048664,0,3.22251556105289,0.300646838828985,1.14057010536972,0.664653872707185,0,0.313932918407225,1.19472429772959,0,0.554698692052555,0.347119476670262,0,0.609414446062818,1.57254001417827,2.75177651954586,0,0,0,5.43138492335149,0,2.48578814858586,0,0,0.443175571691151,0.391102765469606,0,5.97668385270187,0.19980960958213,0.144090417154106,0.687219576995494,0,0,0,0,0.135904206073614,0.209205692624666,0,0,1.20084057741958,0.958337652243951,0,0,0.262887354279314,10.0541664458012,4.35404805622199,0,2.1964690054889,1.28767814440971,4.24025769139558,1.41085292222125,0,0,0,0,0,0,0,1.59045937961861,1.0896272488926,0.160753148465019,0,0,0,0,0.242998226632099,0,0.472834243795189,0.472091293214983,0,1.25501137532991,4.03021914370835,13.579211201094,4.63464379255802,5.5939078284045,0,0,0,0,0,0,0,0.58620893471233,0,2.97350799631566,3.30581504356725,0,2.11444506695002,1.17466153824464,2.67247318669432,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,0.122026264901963,0.625954653532499,1.72022758707021,1.88579387612649,2.73224172942087,0,0.249960815924213,0,0.570930667089935,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0.159296767163702,0,1.24210365501008,0,0,1.04349012362347,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0.883445729729405,0.38582807654183,0,0,1.72715170865599,0,0.276516872303462,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,0.169732529954025,0,0,0,0,0.315446980005013,0,0,0,0.385375350578757,0,0.478901577171454,0.41023272848151,0.252071696221718,0.622415272177961,0.322951291263702,0,0.294443155503077,0.353909170043221,0,0,0.381382095467167,0.690359926060101,0.795664888465099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| ||
|short_description=p@chr17:8924926..8924945,+ | |||
}} | }} |
Latest revision as of 23:27, 25 July 2015
Short description: | p@chr17:8924926..8924945, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:8924926..8924945, + |
Coexpression cluster: | C2449_Synoviocyte_Fibroblast_left_aorta_pharyngeal_anaplastic_leiomyoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.92e-07 | 7 |
macroglial cell | 5.92e-07 | 7 |
astrocyte | 5.92e-07 | 7 |
oligodendrocyte precursor cell | 5.92e-07 | 7 |
astrocyte of the cerebral cortex | 7.90e-07 | 3 |
fibrocyte | 9.07e-07 | 3 |
tendon cell | 9.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.11e-19 | 114 |
posterior neural tube | 1.56e-13 | 15 |
chordal neural plate | 1.56e-13 | 15 |
brainstem | 1.25e-11 | 6 |
segmental subdivision of hindbrain | 2.81e-09 | 12 |
hindbrain | 2.81e-09 | 12 |
presumptive hindbrain | 2.81e-09 | 12 |
organ system subdivision | 1.05e-08 | 223 |
segmental subdivision of nervous system | 1.91e-08 | 13 |
ectoderm-derived structure | 4.53e-07 | 171 |
ectoderm | 4.53e-07 | 171 |
presumptive ectoderm | 4.53e-07 | 171 |
central nervous system | 7.67e-07 | 81 |
pons | 9.07e-07 | 3 |
dense regular connective tissue | 9.07e-07 | 3 |
tendon | 9.07e-07 | 3 |
regular connective tissue | 9.07e-07 | 3 |