FFCP PHASE1:Hg19::chr17:9962959..9962966,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:9962959..9962966,- | |||
|description=CAGE_peak_at_chr17:9962959..9962966,- | |description=CAGE_peak_at_chr17:9962959..9962966,- | ||
|id=chr17:9962959..9962966,- | |id=chr17:9962959..9962966,- | ||
|ontology_enrichment_celltype=CL:0000945!3.47e-19!24;CL:0000826!3.47e-19!24;CL:0000542!3.25e-15!53;CL:0000051!3.25e-15!53;CL:0000738!1.71e-14!140;CL:0000988!2.26e-14!182;CL:0000838!1.03e-13!52;CL:0000037!1.75e-13!172;CL:0000566!1.75e-13!172;CL:0002032!3.41e-12!165;CL:0000837!3.41e-12!165;CL:0000817!8.78e-12!3;CL:0000767!1.54e-11!3;CL:0002087!1.58e-09!119;CL:0000785!1.22e-08!2;CL:0000955!1.22e-08!2;CL:0000818!1.22e-08!2;CL:0000954!1.22e-08!2;CL:0000816!1.22e-08!2;CL:0002031!5.86e-08!124 | |ontology_enrichment_celltype=CL:0000945!3.47e-19!24;CL:0000826!3.47e-19!24;CL:0000542!3.25e-15!53;CL:0000051!3.25e-15!53;CL:0000738!1.71e-14!140;CL:0000988!2.26e-14!182;CL:0000838!1.03e-13!52;CL:0000037!1.75e-13!172;CL:0000566!1.75e-13!172;CL:0002032!3.41e-12!165;CL:0000837!3.41e-12!165;CL:0000817!8.78e-12!3;CL:0000767!1.54e-11!3;CL:0002087!1.58e-09!119;CL:0000785!1.22e-08!2;CL:0000955!1.22e-08!2;CL:0000818!1.22e-08!2;CL:0000954!1.22e-08!2;CL:0000816!1.22e-08!2;CL:0002031!5.86e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.93e-42;24!CL:0000946;7.48e-30;1!CL:0000786;7.48e-30;1!CL:0000785;1.15e-29;1!CL:0000819;1.15e-29;1!CL:0002032;2.73e-29;1!CL:0000557;2.73e-29;1!CL:0000542;1.06e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000785,1.13e-57,2;CL:0000955,1.13e-57,2;CL:0000818,1.13e-57,2;CL:0000954,1.13e-57,2;CL:0000816,1.13e-57,2;CL:0000945,1.86e-42,24;CL:0000826,1.86e-42,24;CL:0000817,6.91e-39,3;CL:0000946,7.48e-30,1;CL:0000786,7.48e-30,1;CL:0000980,7.48e-30,1;CL:0000819,9.99e-30,1;CL:0000838,7.83e-20,52;CL:0000542,1.82e-19,53;CL:0000051,1.82e-19,53;CL:0000236,3.58e-09,14;CL:0002087,5.00e-09,115;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0002031,1.16e-08,120;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000738,1.15e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;1.31e-57;2!CL:0000051;1.06e-12;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.87e-09!10;DOID:2531!2.76e-07!51;DOID:0060083!2.76e-07!51 | |ontology_enrichment_disease=DOID:0060058!3.87e-09!10;DOID:2531!2.76e-07!51;DOID:0060083!2.76e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.98e-45;10!DOID:0060073;1.15e-29;1!DOID:8675;1.15e-29;1!DOID:2355;1.15e-29;1!DOID:74;1.43e-15;2!DOID:1287;1.89e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.22e-45,10;DOID:0060073,9.99e-30,1;DOID:8675,9.99e-30,1;DOID:2355,1.33e-29,1;DOID:74,1.54e-15,2;DOID:2531,2.27e-09,51;DOID:0060083,2.27e-09,51;DOID:1287,1.96e-08,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0,0.393364276848904,0.383829398097213,0.77408061658038,0,0,0,1.00707360754392,1.42169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,1.6001024709939,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,2.37191225980366,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11683330164461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0.516644938982447,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3417856391176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.327796715891087,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0,0.393364276848904,0.383829398097213,0.77408061658038,0,0,0,1.00707360754392,1.42169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,1.6001024709939,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,2.37191225980366,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11683330164461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0.516644938982447,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3417856391176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.327796715891087,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr17:9962959..9962966,- | |short_description=p@chr17:9962959..9962966,- | ||
}} | }} |
Latest revision as of 23:32, 25 July 2015
Short description: | p@chr17:9962959..9962966, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:9962959..9962966, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 1.13e-57 | 2 |
pre-B-II cell | 1.13e-57 | 2 |
transitional stage B cell | 1.13e-57 | 2 |
small pre-B-II cell | 1.13e-57 | 2 |
immature B cell | 1.13e-57 | 2 |
lymphocyte of B lineage | 1.86e-42 | 24 |
pro-B cell | 1.86e-42 | 24 |
precursor B cell | 6.91e-39 | 3 |
antibody secreting cell | 7.48e-30 | 1 |
plasma cell | 7.48e-30 | 1 |
plasmablast | 7.48e-30 | 1 |
B-1 B cell | 9.99e-30 | 1 |
lymphoid lineage restricted progenitor cell | 7.83e-20 | 52 |
lymphocyte | 1.82e-19 | 53 |
common lymphoid progenitor | 1.82e-19 | 53 |
B cell | 3.58e-09 | 14 |
nongranular leukocyte | 5.00e-09 | 115 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 1.16e-08 | 120 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
leukocyte | 1.15e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.22e-45 | 10 |
lymphatic system cancer | 9.99e-30 | 1 |
lymphosarcoma | 9.99e-30 | 1 |
anemia | 1.33e-29 | 1 |
hematopoietic system disease | 1.54e-15 | 2 |
hematologic cancer | 2.27e-09 | 51 |
immune system cancer | 2.27e-09 | 51 |
cardiovascular system disease | 1.96e-08 | 4 |