FFCP PHASE1:Hg19::chr18:21500893..21500904,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21500893..21500904,+ | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21500893..21500904,+ | |description=CAGE_peak_at_chr18:21500893..21500904,+ | ||
|id=chr18:21500893..21500904,+ | |id=chr18:21500893..21500904,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.34e-19!43;CL:0000066!1.02e-13!254;CL:0002368!1.71e-13!13;CL:0002166!3.81e-13!3;CL:0002621!5.44e-13!3;CL:0000223!5.96e-13!59;CL:0002541!2.21e-12!3;CL:0002327!1.02e-09!4;CL:0002536!2.42e-08!2;CL:0002251!3.17e-08!21;CL:0002159!1.50e-07!13 | |ontology_enrichment_celltype=CL:0002076!3.34e-19!43;CL:0000066!1.02e-13!254;CL:0002368!1.71e-13!13;CL:0002166!3.81e-13!3;CL:0002621!5.44e-13!3;CL:0000223!5.96e-13!59;CL:0002541!2.21e-12!3;CL:0002327!1.02e-09!4;CL:0002536!2.42e-08!2;CL:0002251!3.17e-08!21;CL:0002159!1.50e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.87e-23;3!CL:0002541;3.68e-23;3!CL:0002621;7.19e-23;3!CL:0002327;2.02e-17;4!CL:0002076;1.99e-09;42!CL:0000349;1.74e-08;19!CL:0002251;5.03e-08;20!CL:0002231;8.62e-07;3!CL:0002623;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.88e-23,3;CL:0002621,3.68e-23,3;CL:0002541,4.12e-23,3;CL:0002327,1.86e-17,4;CL:0002076,7.48e-10,42;CL:0000349,1.79e-08,19;CL:0002251,4.80e-08,20;CL:0000223,3.92e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!5.44e-13!3;UBERON:0005631!1.08e-12!14;UBERON:0000158!1.08e-12!14;UBERON:0000476!2.21e-12!3;UBERON:0000920!2.21e-12!3;UBERON:0005153!3.70e-10!37;UBERON:0001708!5.87e-10!4;UBERON:0001704!5.87e-10!4;UBERON:0001911!1.02e-09!4;UBERON:0005333!1.02e-09!4;UBERON:0008425!1.02e-09!4;UBERON:0005311!1.02e-09!4;UBERON:0000305!4.88e-09!7;UBERON:0005157!3.92e-08!51;UBERON:0004871!6.56e-08!8;UBERON:0004119!9.42e-08!169;UBERON:0000925!9.42e-08!169;UBERON:0006595!9.42e-08!169;UBERON:0000161!2.76e-07!35;UBERON:0001004!2.90e-07!72;UBERON:0000478!5.59e-07!24;UBERON:0002090!9.45e-07!6 | |ontology_enrichment_uberon=UBERON:0001949!5.44e-13!3;UBERON:0005631!1.08e-12!14;UBERON:0000158!1.08e-12!14;UBERON:0000476!2.21e-12!3;UBERON:0000920!2.21e-12!3;UBERON:0005153!3.70e-10!37;UBERON:0001708!5.87e-10!4;UBERON:0001704!5.87e-10!4;UBERON:0001911!1.02e-09!4;UBERON:0005333!1.02e-09!4;UBERON:0008425!1.02e-09!4;UBERON:0005311!1.02e-09!4;UBERON:0000305!4.88e-09!7;UBERON:0005157!3.92e-08!51;UBERON:0004871!6.56e-08!8;UBERON:0004119!9.42e-08!169;UBERON:0000925!9.42e-08!169;UBERON:0006595!9.42e-08!169;UBERON:0000161!2.76e-07!35;UBERON:0001004!2.90e-07!72;UBERON:0000478!5.59e-07!24;UBERON:0002090!9.45e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.68e-23;3!UBERON:0000920;3.68e-23;3!UBERON:0001949;7.19e-23;3!UBERON:0001708;7.38e-18;4!UBERON:0008895;7.38e-18;4!UBERON:0001911;2.02e-17;4!UBERON:0005631;1.42e-15;10!UBERON:0000158;1.42e-15;10!UBERON:0011159;1.72e-14;5!UBERON:0003929;2.24e-10;7!UBERON:0003350;3.41e-09;8!UBERON:0001828;3.41e-09;8!UBERON:0000161;2.03e-08;19!UBERON:0000166;2.03e-08;19!UBERON:0011137;4.43e-07;11!UBERON:0010323;4.43e-07;11!UBERON:0000478;7.93e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.68e-23,3;UBERON:0000920,4.12e-23,3;UBERON:0001708,7.39e-18,4;UBERON:0008895,7.39e-18,4;UBERON:0001911,1.86e-17,4;UBERON:0005333,1.86e-17,4;UBERON:0008425,1.86e-17,4;UBERON:0005311,1.86e-17,4;UBERON:0011159,1.72e-14,5;UBERON:0010188,3.08e-12,6;UBERON:0002539,3.08e-12,6;UBERON:0008816,3.08e-12,6;UBERON:0005631,2.72e-11,14;UBERON:0000158,2.72e-11,14;UBERON:0003124,1.77e-10,7;UBERON:0003350,2.66e-09,8;UBERON:0001828,2.66e-09,8;UBERON:0000076,3.27e-09,8;UBERON:0000161,1.28e-07,36;UBERON:0000033,1.79e-07,56;UBERON:0000166,2.31e-07,22;UBERON:0010323,4.43e-07,11;UBERON:0000478,8.09e-07,24;UBERON:0000153,9.54e-07,62;UBERON:0007811,9.54e-07,62 | |||
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| ||
|short_description=p@chr18:21500893..21500904,+ | |short_description=p@chr18:21500893..21500904,+ | ||
}} | }} |
Latest revision as of 00:00, 26 July 2015
Short description: | p@chr18:21500893..21500904, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21500893..21500904, + |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.88e-23 | 3 |
gingival epithelial cell | 3.68e-23 | 3 |
chorionic membrane mesenchymal stem cell | 4.12e-23 | 3 |
mammary gland epithelial cell | 1.86e-17 | 4 |
endo-epithelial cell | 7.48e-10 | 42 |
extraembryonic cell | 1.79e-08 | 19 |
epithelial cell of alimentary canal | 4.80e-08 | 20 |
endodermal cell | 3.92e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.68e-23 | 3 |
egg chorion | 4.12e-23 | 3 |
jaw skeleton | 7.39e-18 | 4 |
splanchnocranium | 7.39e-18 | 4 |
mammary gland | 1.86e-17 | 4 |
mammary bud | 1.86e-17 | 4 |
mammary ridge | 1.86e-17 | 4 |
mammary placode | 1.86e-17 | 4 |
primary subdivision of cranial skeletal system | 1.72e-14 | 5 |
protuberance | 3.08e-12 | 6 |
pharyngeal arch | 3.08e-12 | 6 |
embryonic head | 3.08e-12 | 6 |
extraembryonic membrane | 2.72e-11 | 14 |
membranous layer | 2.72e-11 | 14 |
chorion | 1.77e-10 | 7 |
epithelium of mucosa | 2.66e-09 | 8 |
gingiva | 2.66e-09 | 8 |
external ectoderm | 3.27e-09 | 8 |
orifice | 1.28e-07 | 36 |
head | 1.79e-07 | 56 |
oral opening | 2.31e-07 | 22 |
cranial skeletal system | 4.43e-07 | 11 |
extraembryonic structure | 8.09e-07 | 24 |
anterior region of body | 9.54e-07 | 62 |
craniocervical region | 9.54e-07 | 62 |