FFCP PHASE1:Hg19::chr18:3458208..3458219,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:3458208..3458219,+
|short_description=p@chr18:3458208..3458219,+
|description=CAGE_peak_at_chr18:3458208..3458219,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:3458208..3458219,+ | |||
|description=CAGE_peak_at_chr18:3458208..3458219,+ | |||
|id=chr18:3458208..3458219,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.99e-08!45;CL:0002057!2.92e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.68e-14;6!CL:0000404;8.68e-14;6!CL:0000860;1.76e-11;33!CL:0002057;1.76e-11;33!CL:0000473;7.91e-11;39!CL:0000234;7.91e-11;39!CL:0002616;5.53e-10;1!CL:0000319;5.53e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.49e-14,6;CL:0000031,9.49e-14,6;CL:0000404,9.49e-14,6;CL:0000047,1.90e-10,8;CL:0000473,1.90e-10,48;CL:0000234,1.90e-10,48;CL:0000319,2.59e-10,1;CL:0002616,3.10e-10,1;CL:0000860,2.60e-09,42;CL:0002057,2.60e-09,42;CL:0002194,3.73e-08,59;CL:0000576,3.73e-08,59;CL:0000040,3.73e-08,59;CL:0000559,3.73e-08,59;CL:0002009,7.37e-08,61;CL:0000839,3.39e-07,66;CL:0000557,4.47e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000031;8.68e-14;6!UBERON:0000358;2.16e-10;1!CL:0002057;2.33e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;5.53e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.59e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0003937!1.18e-07!12;UBERON:0005399!1.18e-07!12;UBERON:0003101!4.21e-07!22;UBERON:0000079!4.21e-07!22;UBERON:0002367!9.73e-07!11;UBERON:0010147!9.73e-07!11;UBERON:0009846!9.73e-07!11;UBERON:0003353!9.73e-07!11;UBERON:0004902!9.73e-07!11;UBERON:0003820!9.73e-07!11;UBERON:0009847!9.73e-07!11 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr18:3458208..3458219,+ | |||
}} | }} |
Latest revision as of 00:43, 26 July 2015
Short description: | p@chr18:3458208..3458219, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:3458208..3458219, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.49e-14 | 6 |
neuroblast | 9.49e-14 | 6 |
electrically signaling cell | 9.49e-14 | 6 |
neuronal stem cell | 1.90e-10 | 8 |
defensive cell | 1.90e-10 | 48 |
phagocyte | 1.90e-10 | 48 |
mucus secreting cell | 2.59e-10 | 1 |
perirenal adipocyte cell | 3.10e-10 | 1 |
classical monocyte | 2.60e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.60e-09 | 42 |
monopoietic cell | 3.73e-08 | 59 |
monocyte | 3.73e-08 | 59 |
monoblast | 3.73e-08 | 59 |
promonocyte | 3.73e-08 | 59 |
macrophage dendritic cell progenitor | 7.37e-08 | 61 |
myeloid lineage restricted progenitor cell | 3.39e-07 | 66 |
granulocyte monocyte progenitor cell | 4.47e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.59e-10 | 1 |