FFCP PHASE1:Hg19::chr19:3982362..3982381,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:3982362..3982381,- | |||
|coexpression_cluster_id=C1061 | |||
|description=CAGE_peak_at_chr19:3982362..3982381,- | |description=CAGE_peak_at_chr19:3982362..3982381,- | ||
|id=chr19:3982362..3982381,- | |id=chr19:3982362..3982381,- | ||
|ontology_enrichment_celltype=CL:0002371!7.96e-15!591;CL:0000144!1.01e-14!625;CL:0000548!1.76e-11!679;CL:0000004!1.76e-11!679;CL:0000255!1.76e-11!679;CL:0000012!4.92e-11!682;CL:0000034!1.33e-08!444;CL:0000723!1.44e-08!436;CL:0000048!2.56e-08!430;CL:0000003!1.92e-07!722 | |ontology_enrichment_celltype=CL:0002371!7.96e-15!591;CL:0000144!1.01e-14!625;CL:0000548!1.76e-11!679;CL:0000004!1.76e-11!679;CL:0000255!1.76e-11!679;CL:0000012!4.92e-11!682;CL:0000034!1.33e-08!444;CL:0000723!1.44e-08!436;CL:0000048!2.56e-08!430;CL:0000003!1.92e-07!722 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.48e-08,441;CL:0000723,2.49e-08,433;CL:0000048,4.41e-08,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.51e-07!70;UBERON:0000914!4.39e-07!83;UBERON:0002329!4.39e-07!83;UBERON:0003077!4.39e-07!83;UBERON:0003059!4.39e-07!83;UBERON:0007282!4.39e-07!83;UBERON:0009618!4.39e-07!83;UBERON:0007285!4.39e-07!83;UBERON:0000486!9.79e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.79e-08,78;UBERON:0002329,1.05e-07,71;UBERON:0003059,1.05e-07,71;UBERON:0007282,1.05e-07,71;UBERON:0004290,1.05e-07,71;UBERON:0009618,1.05e-07,71;UBERON:0007524,1.43e-07,73;UBERON:0003077,2.91e-07,72;UBERON:0007285,2.91e-07,72;UBERON:0000926,4.99e-07,315;UBERON:0004120,4.99e-07,315;UBERON:0006603,4.99e-07,315;UBERON:0001134,8.65e-07,62;UBERON:0002036,8.65e-07,62;UBERON:0003082,8.65e-07,62;UBERON:0000486,8.93e-07,83;UBERON:0002385,8.98e-07,64;UBERON:0001015,8.98e-07,64;UBERON:0000383,8.98e-07,64 | |||
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| ||
|short_description=p@chr19:3982362..3982381,- | |short_description=p@chr19:3982362..3982381,- | ||
}} | }} |
Latest revision as of 07:31, 26 July 2015
Short description: | p@chr19:3982362..3982381, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:3982362..3982381, - |
Coexpression cluster: | C1061_skeletal_Bronchial_pancreas_iPS_diffuse_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.48e-08 | 441 |
somatic stem cell | 2.49e-08 | 433 |
multi fate stem cell | 4.41e-08 | 427 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.79e-08 | 78 |
somite | 1.05e-07 | 71 |
presomitic mesoderm | 1.05e-07 | 71 |
presumptive segmental plate | 1.05e-07 | 71 |
dermomyotome | 1.05e-07 | 71 |
trunk paraxial mesoderm | 1.05e-07 | 71 |
dense mesenchyme tissue | 1.43e-07 | 73 |
paraxial mesoderm | 2.91e-07 | 72 |
presumptive paraxial mesoderm | 2.91e-07 | 72 |
mesoderm | 4.99e-07 | 315 |
mesoderm-derived structure | 4.99e-07 | 315 |
presumptive mesoderm | 4.99e-07 | 315 |
skeletal muscle tissue | 8.65e-07 | 62 |
striated muscle tissue | 8.65e-07 | 62 |
myotome | 8.65e-07 | 62 |
multilaminar epithelium | 8.93e-07 | 83 |
muscle tissue | 8.98e-07 | 64 |
musculature | 8.98e-07 | 64 |
musculature of body | 8.98e-07 | 64 |