FFCP PHASE1:Hg19::chr19:4054140..4054156,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:4054140..4054156,- | |||
|description=CAGE_peak_at_chr19:4054140..4054156,- | |description=CAGE_peak_at_chr19:4054140..4054156,- | ||
|id=chr19:4054140..4054156,- | |id=chr19:4054140..4054156,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;8.62e-16;1!CL:0001014;2.23e-08;2!CL:0001016;2.23e-08;2!CL:0002570;4.19e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,8.63e-16,1;CL:0001014,1.86e-08,2;CL:0001016,1.86e-08,2;CL:0002570,3.51e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.92e-15;1!UBERON:0010226;1.92e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.29e-07!34;UBERON:0002780!1.46e-07!41;UBERON:0001890!1.46e-07!41;UBERON:0006240!1.46e-07!41;UBERON:0007023!2.18e-07!115;UBERON:0003080!3.41e-07!42;UBERON:0002791!3.54e-07!33;UBERON:0002020!6.10e-07!34;UBERON:0003528!6.10e-07!34;UBERON:0001049!7.75e-07!57;UBERON:0005068!7.75e-07!57;UBERON:0006241!7.75e-07!57;UBERON:0007135!7.75e-07!57;UBERON:0001869!8.24e-07!32 | |ontology_enrichment_uberon=UBERON:0001893!1.29e-07!34;UBERON:0002780!1.46e-07!41;UBERON:0001890!1.46e-07!41;UBERON:0006240!1.46e-07!41;UBERON:0007023!2.18e-07!115;UBERON:0003080!3.41e-07!42;UBERON:0002791!3.54e-07!33;UBERON:0002020!6.10e-07!34;UBERON:0003528!6.10e-07!34;UBERON:0001049!7.75e-07!57;UBERON:0005068!7.75e-07!57;UBERON:0006241!7.75e-07!57;UBERON:0007135!7.75e-07!57;UBERON:0001869!8.24e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.92e-15;1!UBERON:0001154;1.92e-15;1!UBERON:0001153;1.92e-15;1!UBERON:0009854;1.92e-15;1!UBERON:0002082;1.92e-15;1!UBERON:0000078;1.49e-08;2!UBERON:0002012;1.49e-08;2!UBERON:0008886;1.49e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.06e-15,1;UBERON:0002082,2.06e-15,1;UBERON:0010226,2.06e-15,1;UBERON:0001154,3.17e-15,1;UBERON:0001153,3.17e-15,1;UBERON:0001045,3.17e-15,1;UBERON:0000078,1.50e-08,2;UBERON:0007497,1.50e-08,2;UBERON:0003643,1.50e-08,2;UBERON:0003504,1.50e-08,2;UBERON:0003469,1.50e-08,2;UBERON:0003496,1.50e-08,2;UBERON:0002012,1.50e-08,2;UBERON:0008886,1.50e-08,2;UBERON:0007303,1.50e-08,2;UBERON:0002061,1.50e-08,2;UBERON:0005432,1.50e-08,2;UBERON:0004363,1.50e-08,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.251085279189606,0.152826811495903,0.0821005894499457,0.314843125254717,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0.293600439334847,0,1.00272223735071,0.434021741431704,0,0,0,0.726991193897824,0,0,0.697287110717054,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0.689491361473237,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0,0.211255286311942,0,0.209658645508376,0,0,0.16072558669708,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,1.17903228824749,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0.221729397462564,0,0.0654895377488563,0.364295288292542,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0,0.375355559615893,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0.277765335475589,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0.335964256397719,0,0.0895585227028483,0.581267877027924,0,8.86793828212698,0.088048434013226,0.414656231081544,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,3.57656445851882,1.690605505112,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0.112085143993527,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0.320182673410333,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0,0.40101294060657,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.511359764496605,0,0.165284915360978,0,0.127612712494584,0.50578890427775,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0,0,0,0,0,0.974853958525138,0,0,0.141405431953713,2.26016233240486,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0.557409525377156,0,0.142283686696828,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0.398495976502139,1.10513566212459,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0.969332746095218,0,0,0.260427761085233,0,0,0,0,0,0,0,0.347249989866585,0.885741385813839,0,1.52581736317083,0.331737779793674,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0,0,0,3.06579894587209,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0,0,0.123563938946503,0.208843899010911,0.134802265961354,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0,0.387956065953678,0.0882561266915003,0,0.274083849293502,0,0.126621591911757,0.195551382734803,0,0.85381197895741,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0.577901179803038,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0.164831716762333,0,0.0984274815147488,0,0,0.272406812223151,0,0,0.415440338029185,0.674921674654501,1.5476039091159,0.121499113316049,0,0,0.0524545881349981,0,0.179287339332845,0,0,1.32418394073086,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0.146552233678082,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.751145584238999,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.378806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| ||
|short_description=p@chr19:4054140..4054156,- | |short_description=p@chr19:4054140..4054156,- | ||
}} | }} |
Latest revision as of 07:46, 26 July 2015
Short description: | p@chr19:4054140..4054156, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:4054140..4054156, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 8.63e-16 | 1 |
CD1a-positive Langerhans cell | 1.86e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.86e-08 | 2 |
mesenchymal stem cell of adipose | 3.51e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.06e-15 | 1 |
cardiac ventricle | 2.06e-15 | 1 |
future cardiac ventricle | 2.06e-15 | 1 |
vermiform appendix | 3.17e-15 | 1 |
caecum | 3.17e-15 | 1 |
midgut | 3.17e-15 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.50e-08 | 2 |
developing epithelial placode | 1.50e-08 | 2 |
respiratory system arterial blood vessel | 1.50e-08 | 2 |
respiratory system blood vessel | 1.50e-08 | 2 |
respiratory system artery | 1.50e-08 | 2 |
head blood vessel | 1.50e-08 | 2 |
pulmonary artery | 1.50e-08 | 2 |
pulmonary vascular system | 1.50e-08 | 2 |
pharyngeal vasculature | 1.50e-08 | 2 |
truncus arteriosus | 1.50e-08 | 2 |
aortic sac | 1.50e-08 | 2 |
pharyngeal arch artery | 1.50e-08 | 2 |