FFCP PHASE1:Hg19::chr19:47747535..47747555,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:47747535..47747555,- | |||
|coexpression_cluster_id=C3807 | |||
|description=CAGE_peak_at_chr19:47747535..47747555,- | |||
|id=chr19:47747535..47747555,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002550;9.60e-12;1!CL:0000313;9.60e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002550,7.76e-12,1;CL:0000313,1.81e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.58e-19!143;DOID:305!8.30e-16!106;DOID:14566!3.67e-13!239;DOID:162!6.74e-13!235;DOID:0050615!3.24e-10!16;DOID:1324!3.54e-09!15;DOID:3905!1.25e-07!9;DOID:0050686!3.71e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1799;9.60e-12;1!DOID:0050619;9.60e-12;1!DOID:10165;9.60e-12;1!DOID:178;9.60e-12;1!DOID:326;9.60e-12;1!DOID:3978;9.60e-12;1!DOID:3394;9.60e-12;1!DOID:2152;9.60e-12;1!DOID:5844;9.60e-12;1!DOID:1357;9.60e-12;1!DOID:1798;9.60e-12;1!DOID:5093;1.29e-11;4!DOID:1612;1.29e-11;4!DOID:0050615;1.24e-10;16!DOID:3119;2.54e-07;14!DOID:1749;3.05e-07;14!DOID:299;6.01e-07;25!DOID:1324;8.63e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:178,6.26e-12,1;DOID:326,6.26e-12,1;DOID:3978,6.26e-12,1;DOID:3394,6.26e-12,1;DOID:5844,6.26e-12,1;DOID:5093,9.63e-12,4;DOID:1612,9.63e-12,4;DOID:0050619,1.07e-11,1;DOID:1357,1.07e-11,1;DOID:1799,1.32e-11,1;DOID:10165,1.32e-11,1;DOID:1798,1.32e-11,1;DOID:2152,1.81e-11,1;DOID:0050615,1.31e-10,16;DOID:0050686,3.86e-09,137;DOID:0050687,9.88e-09,143;DOID:162,9.29e-08,235;DOID:14566,1.51e-07,239;DOID:3119,2.62e-07,14;DOID:1749,2.92e-07,14;DOID:299,6.25e-07,25;DOID:305,8.35e-07,106;DOID:1324,8.81e-07,15 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;9.60e-12;1!UBERON:0001764;9.60e-12;1!UBERON:0001825;9.60e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.07e-11,1;UBERON:0001825,1.07e-11,1;UBERON:0004911,1.81e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.232401601740905,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,1.40592859100278,0,0,0,0.704606991862589,0.161872944368132,0.140450806702248,0,0.122834317311768,0.413303124703062,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0.600952235626387,0,0.358779271377724,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0.462985512576611,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0,0,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0.111443384277478,0,0,0.593929361665277,0,0,0,0,0.659215496907038,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0.716084698702437,0,0,0,0,0,0.0927680981618513,0,4.6876996995342,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,1.37897349296586,0,0.694499979733169,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,4.68435393131658,0.139423744278603,0,0.113942055847001,0.23056390438806,0.807818799687949,2.7161842980502,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,1.08194319871046,0,0.0884575645033392,0,2.37216902944498,0.617819694732514,0.104421949505455,0.404406797884062,0,0,0,0.586993856796269,0.971121518136371,0,0,0,0,2.1045278718029,0.207376382794494,0,0.330991955875499,0.941798755221676,0,0.284609546029793,0.970722711091971,0,0,0.34823682632161,0,0.687944129886466,0,0.803982487948041,0.0821154570532092,0,0,0,0,0,0.126621591911757,0,0.160317640503067,0,0,0,2.1761953271524,0.686379991447858,0.720273989940749,0,0.235694034616795,0,0,0.407992870545287,0.288950589901519,0.600420288709789,0.410716136675979,0,0,0,0,0,0,1.59743200399193,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0.338693328263138,0,0,0,0.412618309791701,0,0,0,0.303747783290123,0,0.0788057072991982,0,0.211200673038813,0.35857467866569,1.15149118391667,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.258565912723101,0.52893040697076,1.53978154095896,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0.244052529803926,0,0,0.221858103073705,0.0620964029413835,0.968440444553616,0,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,1.02496607435179,0,0,0.138258436151731,0,0.265729680626726,0.163565394255844,0.327609848846413,0,0.633936370075881,0,0.106691729694141,0.344429959321631,0.567515953566836,0,0.979156554036111,0,0.639471856518258,0.107824811396682,0.157265941855896,0.327628914576042,0.169732529954025,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.319267718114302,0,0,0.138314504928436,0,0,1.86480665151949,0.825788063434183,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,1.04762677792569,0,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0.475788130837822,0,0.354581522651905,0,0,0.157115589916002,0.280272163313789,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0,1.00669888618013,0.294450700845729,0,0,0,0,0.485710993059139,0.233939463462106,0.397901550322736,0.475680363110274,0.33883824611688,0.439762066981716,0.301925687133347,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0.891139200981258,0,0,0.0939839179798536,0,0,0.357107877211315,0,1.04313776695919,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.1837897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| |||
|short_description=p@chr19:47747535..47747555,- | |||
}} |
Latest revision as of 15:27, 27 July 2015
Short description: | p@chr19:47747535..47747555, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47747535..47747555, - |
Coexpression cluster: | C3807_breast_cervical_cord_Fibroblast_maxillary_giant_embryonic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of the conjuctiva | 7.76e-12 | 1 |
serous secreting cell | 1.81e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.07e-11 | 1 |
paranasal sinus | 1.07e-11 | 1 |
epithelium of female gonad | 1.81e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 6.26e-12 | 1 |
ischemia | 6.26e-12 | 1 |
extrinsic cardiomyopathy | 6.26e-12 | 1 |
myocardial ischemia | 6.26e-12 | 1 |
myocardial infarction | 6.26e-12 | 1 |
thoracic cancer | 9.63e-12 | 4 |
breast cancer | 9.63e-12 | 4 |
paranasal sinus cancer | 1.07e-11 | 1 |
maxillary sinus cancer | 1.07e-11 | 1 |
islet cell tumor | 1.32e-11 | 1 |
endocrine pancreas cancer | 1.32e-11 | 1 |
pancreatic endocrine carcinoma | 1.32e-11 | 1 |
ovary epithelial cancer | 1.81e-11 | 1 |
respiratory system cancer | 1.31e-10 | 16 |
organ system cancer | 3.86e-09 | 137 |
cell type cancer | 9.88e-09 | 143 |
cancer | 9.29e-08 | 235 |
disease of cellular proliferation | 1.51e-07 | 239 |
gastrointestinal system cancer | 2.62e-07 | 14 |
squamous cell carcinoma | 2.92e-07 | 14 |
adenocarcinoma | 6.25e-07 | 25 |
carcinoma | 8.35e-07 | 106 |
lung cancer | 8.81e-07 | 15 |