FFCP PHASE1:Hg19::chr19:49130770..49130779,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49130770..49130779,+ | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr19:49130770..49130779,+ | |description=CAGE_peak_at_chr19:49130770..49130779,+ | ||
|id=chr19:49130770..49130779,+ | |id=chr19:49130770..49130779,+ | ||
|ontology_enrichment_celltype=CL:0002178!4.21e-11!3;CL:0000223!5.06e-09!59;CL:0002251!7.30e-09!21;CL:0000313!7.75e-09!1;CL:0002563!9.75e-09!4;CL:1001319!1.91e-08!1;CL:1000600!1.91e-08!1;CL:0000066!4.21e-07!254 | |ontology_enrichment_celltype=CL:0002178!4.21e-11!3;CL:0000223!5.06e-09!59;CL:0002251!7.30e-09!21;CL:0000313!7.75e-09!1;CL:0002563!9.75e-09!4;CL:1001319!1.91e-08!1;CL:1000600!1.91e-08!1;CL:0000066!4.21e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002231;2.93e-23;3!CL:0002563;8.00e-18;4!CL:0002076;9.62e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.62e-23,3;CL:0002563,8.69e-18,4;CL:0002076,2.04e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.86e-17!106;DOID:3493!2.17e-16!2;DOID:299!4.19e-14!25;DOID:0050687!7.14e-12!143;DOID:2152!7.75e-09!1 | |ontology_enrichment_disease=DOID:305!3.86e-17!106;DOID:3493!2.17e-16!2;DOID:299!4.19e-14!25;DOID:0050687!7.14e-12!143;DOID:2152!7.75e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:3493;7.04e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,7.05e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0003350!3.35e-14!5;UBERON:0000344!3.85e-10!12;UBERON:0001007!3.36e-09!155;UBERON:0001555!3.36e-09!155;UBERON:0007026!3.36e-09!155;UBERON:0004911!7.75e-09!1;UBERON:0001242!9.75e-09!4;UBERON:0001262!9.75e-09!4;UBERON:0004786!9.75e-09!4;UBERON:0004808!9.75e-09!4;UBERON:0001277!9.75e-09!4;UBERON:0000997!1.13e-08!1;UBERON:0005056!1.13e-08!1;UBERON:0004921!1.14e-08!129;UBERON:0004185!1.14e-08!129;UBERON:0004645!1.91e-08!1;UBERON:0001256!1.91e-08!1;UBERON:0001259!1.91e-08!1;UBERON:0004119!3.39e-08!169;UBERON:0000925!3.39e-08!169;UBERON:0006595!3.39e-08!169;UBERON:0005911!1.66e-07!82;UBERON:0000077!2.62e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;8.00e-18;4!UBERON:0001262;8.00e-18;4!UBERON:0004786;8.00e-18;4!UBERON:0004808;8.00e-18;4!UBERON:0001277;8.00e-18;4!UBERON:0000485;8.57e-11;7!UBERON:0003929;8.57e-11;7!UBERON:0003350;1.30e-09;8!UBERON:0002367;2.40e-07;11!UBERON:0010147;2.40e-07;11!UBERON:0003937;7.70e-07;12!UBERON:0005399;7.70e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,8.69e-18,4;UBERON:0001262,8.69e-18,4;UBERON:0004786,8.69e-18,4;UBERON:0004808,8.69e-18,4;UBERON:0001277,8.69e-18,4;UBERON:0003350,1.35e-09,8;UBERON:0000485,1.12e-08,9;UBERON:0002367,2.32e-07,11;UBERON:0010147,2.32e-07,11;UBERON:0009846,2.32e-07,11;UBERON:0003353,2.32e-07,11;UBERON:0004902,2.32e-07,11;UBERON:0003820,2.32e-07,11;UBERON:0009847,2.32e-07,11;UBERON:0003937,7.48e-07,12;UBERON:0005399,7.48e-07,12 | |||
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|short_description=p@chr19:49130770..49130779,+ | |short_description=p@chr19:49130770..49130779,+ | ||
}} | }} |
Latest revision as of 15:46, 27 July 2015
Short description: | p@chr19:49130770..49130779, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49130770..49130779, + |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.62e-23 | 3 |
intestinal epithelial cell | 8.69e-18 | 4 |
endo-epithelial cell | 2.04e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 8.69e-18 | 4 |
wall of intestine | 8.69e-18 | 4 |
gastrointestinal system mucosa | 8.69e-18 | 4 |
gastrointestinal system epithelium | 8.69e-18 | 4 |
intestinal epithelium | 8.69e-18 | 4 |
epithelium of mucosa | 1.35e-09 | 8 |
simple columnar epithelium | 1.12e-08 | 9 |
prostate gland | 2.32e-07 | 11 |
male accessory sex gland | 2.32e-07 | 11 |
embryonic cloacal epithelium | 2.32e-07 | 11 |
epithelium of hindgut | 2.32e-07 | 11 |
urogenital sinus epithelium | 2.32e-07 | 11 |
prostate bud | 2.32e-07 | 11 |
prostate field | 2.32e-07 | 11 |
sex gland | 7.48e-07 | 12 |
male reproductive gland | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.05e-34 | 2 |