FFCP PHASE1:Hg19::chr19:55671322..55671342,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:55671322..55671342,- | |||
|coexpression_cluster_id=C1340 | |coexpression_cluster_id=C1340 | ||
|description=CAGE_peak_at_chr19:55671322..55671342,- | |description=CAGE_peak_at_chr19:55671322..55671342,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;8.04e-07;1 | |ontology_enrichment_development_v019=UBERON:0010227;8.04e-07;1 | ||
|ontology_enrichment_disease=DOID:1240!4.59e-18!39;DOID:8692!7.68e-18!31;DOID:2531!1.31e-13!51;DOID:0060083!1.31e-13!51;DOID:1036!1.03e-08!8;DOID:0050686!2.32e-08!137;DOID:1287!3.90e-07!4 | |ontology_enrichment_disease=DOID:1240!4.59e-18!39;DOID:8692!7.68e-18!31;DOID:2531!1.31e-13!51;DOID:0060083!1.31e-13!51;DOID:1036!1.03e-08!8;DOID:0050686!2.32e-08!137;DOID:1287!3.90e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.72e-27;31!DOID:1240;1.68e-22;39!DOID:2531;1.80e-18;51!DOID:0060083;1.80e-18;51!DOID:1036;1.88e-17;8!DOID:9119;3.13e-07;1!DOID:8552;4.69e-07;1 | |ontology_enrichment_disease_v019=DOID:8692;1.72e-27;31!DOID:1240;1.68e-22;39!DOID:2531;1.80e-18;51!DOID:0060083;1.80e-18;51!DOID:1036;1.88e-17;8!DOID:9119;3.13e-07;1!DOID:8552;4.69e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,4.70e-29,39;DOID:8692,3.58e-28,31;DOID:2531,1.89e-24,51;DOID:0060083,1.89e-24,51;DOID:1036,1.98e-17,8;DOID:0050686,4.74e-09,137;DOID:9119,3.13e-07,1;DOID:8552,4.97e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.39e-09;15!UBERON:0000179;5.39e-09;15!UBERON:0000463;5.39e-09;15!UBERON:0004151;4.23e-08;3!UBERON:0002079;8.04e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.39e-09;15!UBERON:0000179;5.39e-09;15!UBERON:0000463;5.39e-09;15!UBERON:0004151;4.23e-08;3!UBERON:0002079;8.04e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.99e-09,15;UBERON:0000179,4.99e-09,15;UBERON:0000463,4.99e-09,15;UBERON:0004151,4.55e-08,3;UBERON:0002079,9.25e-07,1;UBERON:0002146,9.79e-07,1;UBERON:0005623,9.79e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,3.423993102076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06400514659507,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0.219500570817251,0,1.50793458617446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,1.68127715990291,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,1.52234282769651,0.764637207142375,4.5571774973933,0,0,2.59389324477087,3.24018862342869,2.37937552888281,5.9821479831385,0,0,0,0,0,0.318852545457645,8.18275422874548,0,0.211673582723883,0,14.3206560837864,0.912938716132769,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0,0,0.835218521685727,4.92349595790849,13.7932396022751,83.6010639674528,98.6909035614947,0,0,0.121360521749513,1.00299045849731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35470384592537,4.32150372940407,3.38393490925771,3.13700054908383,3.35643173951685,0.75901493089674,11.2844971076069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0.150323419414493,0,0,0,0,0,0.853828638089378,2.21879476821022,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0.686379991447858,0,0,0,0.407712618220842,0.627617077873999,0,0,0,0,0,0,0,0.837847203816763,1.83328339209347,0,0.199679000498991,0.858452096273142,0.446342914883745,1.61240333968143,0,0,0.0787831823072236,0,0,0,1.1007533168552,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94634094001504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78482710962785,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27865567904938,1.21700790611806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.596852325484105,0.118920090777569,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0.709036767709349,0,0,0,0.0802413666891683,0,0,0,1.73548718412503,0,0,0,0,0,0,0.883164973845552,0,0.253397002022874,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,3.423993102076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06400514659507,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0.219500570817251,0,1.50793458617446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,1.68127715990291,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,1.52234282769651,0.764637207142375,4.5571774973933,0,0,2.59389324477087,3.24018862342869,2.37937552888281,5.9821479831385,0,0,0,0,0,0.318852545457645,8.18275422874548,0,0.211673582723883,0,14.3206560837864,0.912938716132769,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0,0,0.835218521685727,4.92349595790849,13.7932396022751,83.6010639674528,98.6909035614947,0,0,0.121360521749513,1.00299045849731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35470384592537,4.32150372940407,3.38393490925771,3.13700054908383,3.35643173951685,0.75901493089674,11.2844971076069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0.150323419414493,0,0,0,0,0,0.853828638089378,2.21879476821022,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0.686379991447858,0,0,0,0.407712618220842,0.627617077873999,0,0,0,0,0,0,0,0.837847203816763,1.83328339209347,0,0.199679000498991,0.858452096273142,0.446342914883745,1.61240333968143,0,0,0.0787831823072236,0,0,0,1.1007533168552,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94634094001504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78482710962785,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27865567904938,1.21700790611806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.596852325484105,0.118920090777569,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0.709036767709349,0,0,0,0.0802413666891683,0,0,0,1.73548718412503,0,0,0,0,0,0,0.883164973845552,0,0.253397002022874,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:55671322..55671342,- | |short_description=p@chr19:55671322..55671342,- | ||
}} | }} |
Latest revision as of 17:23, 27 July 2015
Short description: | p@chr19:55671322..55671342, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:55671322..55671342, - |
Coexpression cluster: | C1340_acute_chronic_granulocyte_leukemia_CD34_Mast_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 4.99e-09 | 15 |
haemolymphatic fluid | 4.99e-09 | 15 |
organism substance | 4.99e-09 | 15 |
cardiac chamber | 4.55e-08 | 3 |
left cardiac atrium | 9.25e-07 | 1 |
pulmonary valve | 9.79e-07 | 1 |
semi-lunar valve | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.70e-29 | 39 |
myeloid leukemia | 3.58e-28 | 31 |
hematologic cancer | 1.89e-24 | 51 |
immune system cancer | 1.89e-24 | 51 |
chronic leukemia | 1.98e-17 | 8 |
organ system cancer | 4.74e-09 | 137 |
acute myeloid leukemia | 3.13e-07 | 1 |
chronic myeloid leukemia | 4.97e-07 | 1 |