FFCP PHASE1:Hg19::chr1:115822929..115822945,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:115822929..115822945,+ | |||
|coexpression_cluster_id=C2515 | |coexpression_cluster_id=C2515 | ||
|description=CAGE_peak_at_chr1:115822929..115822945,+ | |description=CAGE_peak_at_chr1:115822929..115822945,+ | ||
|id=chr1:115822929..115822945,+ | |id=chr1:115822929..115822945,+ | ||
|ontology_enrichment_celltype=CL:0000057!9.33e-28!75;CL:0000136!2.06e-17!15;CL:0002620!2.27e-14!23;CL:0000055!2.66e-12!180;CL:0002334!1.07e-10!12;CL:0000134!2.31e-07!358;CL:0000219!4.09e-07!390;CL:0002320!6.87e-07!365 | |ontology_enrichment_celltype=CL:0000057!9.33e-28!75;CL:0000136!2.06e-17!15;CL:0002620!2.27e-14!23;CL:0000055!2.66e-12!180;CL:0002334!1.07e-10!12;CL:0000134!2.31e-07!358;CL:0000219!4.09e-07!390;CL:0002320!6.87e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.88e-19;13!CL:0002334;1.09e-15;12!CL:0002620;1.01e-13;23!CL:0000569;2.72e-10;4!CL:0002617;1.66e-09;2!CL:0002583;3.11e-09;2!CL:0002570;6.34e-09;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.60e-21,76;CL:0000136,1.93e-20,15;CL:0002334,9.71e-16,12;CL:0002620,9.39e-14,23;CL:0000134,4.25e-11,354;CL:0002320,1.04e-10,361;CL:0000569,2.77e-10,4;CL:0000011,2.77e-10,4;CL:0000219,4.14e-10,386;CL:0002617,1.40e-09,2;CL:0002583,2.53e-09,2;CL:0002570,7.71e-09,8;CL:0000048,2.36e-08,427;CL:0000723,4.11e-08,433;CL:0000034,8.42e-08,441;CL:0000135,9.10e-07,3;CL:0000388,9.10e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000011;2.72e-10;4 | |||
|ontology_enrichment_disease=DOID:17!1.01e-09!5;DOID:450!1.01e-09!5;DOID:66!1.01e-09!5;DOID:423!1.01e-09!5;DOID:0080000!1.01e-09!5;DOID:11722!1.01e-09!5 | |ontology_enrichment_disease=DOID:17!1.01e-09!5;DOID:450!1.01e-09!5;DOID:66!1.01e-09!5;DOID:423!1.01e-09!5;DOID:0080000!1.01e-09!5;DOID:11722!1.01e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.81e-14;5!DOID:450;2.81e-14;5!DOID:66;2.81e-14;5!DOID:423;2.81e-14;5!DOID:0080000;2.81e-14;5!DOID:11722;2.81e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.01e-14,5;DOID:450,3.01e-14,5;DOID:66,3.01e-14,5;DOID:423,3.01e-14,5;DOID:0080000,3.01e-14,5;DOID:11722,3.01e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!7.08e-15!45;UBERON:0002416!7.08e-15!45;UBERON:0001013!6.62e-14!14;UBERON:0003102!7.16e-13!95;UBERON:0002097!8.77e-10!40;UBERON:0002072!2.17e-09!5;UBERON:0002384!4.51e-07!375 | |ontology_enrichment_uberon=UBERON:0002199!7.08e-15!45;UBERON:0002416!7.08e-15!45;UBERON:0001013!6.62e-14!14;UBERON:0003102!7.16e-13!95;UBERON:0002097!8.77e-10!40;UBERON:0002072!2.17e-09!5;UBERON:0002384!4.51e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.74e-18;14!UBERON:0002072;1.02e-13;5!UBERON:0002199;2.39e-12;46!UBERON:0002416;2.39e-12;46!UBERON:0005406;7.70e-09;2!UBERON:0003102;1.23e-08;50!UBERON:0004457;2.03e-07;9!UBERON:0000042;2.03e-07;9!UBERON:0002097;3.05e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.67e-18,14;UBERON:0002199,2.26e-17,46;UBERON:0002416,2.26e-17,46;UBERON:0002072,9.37e-14,5;UBERON:0002097,2.11e-10,41;UBERON:0002384,3.50e-10,371;UBERON:0003102,1.69e-09,99;UBERON:0005406,4.53e-09,2;UBERON:0007846,9.10e-07,3;UBERON:0000043,9.10e-07,3;UBERON:0007845,9.10e-07,3 | |||
|phase1_expression=3.81524596468169,2.78330681058278,1.83240725324762,1.0007329835313,0,1.74467704820074,5.06599756336621,0.631719873426831,2.35067065379855,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,3.83986624358335,5.73673241497627,0.354668382198357,0.560677600142307,0,0,0,0,0,0.605429710579726,0,0.468642863667593,0,0,0.448346041655403,0,0,0,0.61246251376468,0,0.929932030581889,1.18800285728205,0.494533858557114,0,0,0,0,0,2.63386572528503,0.612975591598039,0.300476117813194,0,0.89694817844431,2.34913127700424,8.9011398487016,7.20218630602566,3.09157587715317,0.515281080091258,0.930584281657949,4.21940830603166,0.779496041289589,5.55354303337052,5.98324341174946,61.1022094775109,0.710019185033229,0,1.52604533079439,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45579603071565,3.03329280955175,0.473107245101804,1.52283839490527,0,0,0,0,0,1.04260337361699,0,0,0,0,0,0,0,0,2.23297027036899,0.61384789315225,0.561320188866147,1.28139149255701,0,0,1.48418066444991,1.54209693802656,3.01854933032316,2.46381468041427,0,1.27831416305955,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.462145851343933,0,0,0.107420244868274,0,0,0.267096106940212,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,8.23237232399755,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0.208843899010911,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,1.22538230705385,0.983617892129413,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,8.65677856743869,6.07654605602784,24.9662637676176,0.189403005275089,0,0.889811221596536,2.05956061557231,8.9226245020311,2.64243240990727,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.218419276384028,0.169732529954025,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,1.0580536810308,2.97596014533401,0.462175628631418,7.7872781182282,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0.190941474834495,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=3.81524596468169,2.78330681058278,1.83240725324762,1.0007329835313,0,1.74467704820074,5.06599756336621,0.631719873426831,2.35067065379855,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,3.83986624358335,5.73673241497627,0.354668382198357,0.560677600142307,0,0,0,0,0,0.605429710579726,0,0.468642863667593,0,0,0.448346041655403,0,0,0,0.61246251376468,0,0.929932030581889,1.18800285728205,0.494533858557114,0,0,0,0,0,2.63386572528503,0.612975591598039,0.300476117813194,0,0.89694817844431,2.34913127700424,8.9011398487016,7.20218630602566,3.09157587715317,0.515281080091258,0.930584281657949,4.21940830603166,0.779496041289589,5.55354303337052,5.98324341174946,61.1022094775109,0.710019185033229,0,1.52604533079439,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45579603071565,3.03329280955175,0.473107245101804,1.52283839490527,0,0,0,0,0,1.04260337361699,0,0,0,0,0,0,0,0,2.23297027036899,0.61384789315225,0.561320188866147,1.28139149255701,0,0,1.48418066444991,1.54209693802656,3.01854933032316,2.46381468041427,0,1.27831416305955,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.462145851343933,0,0,0.107420244868274,0,0,0.267096106940212,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,8.23237232399755,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0.208843899010911,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,1.22538230705385,0.983617892129413,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,8.65677856743869,6.07654605602784,24.9662637676176,0.189403005275089,0,0.889811221596536,2.05956061557231,8.9226245020311,2.64243240990727,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.218419276384028,0.169732529954025,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,1.0580536810308,2.97596014533401,0.462175628631418,7.7872781182282,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0.190941474834495,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr1:115822929..115822945,+ | |short_description=p@chr1:115822929..115822945,+ | ||
}} | }} |
Latest revision as of 20:01, 27 July 2015
Short description: | p@chr1:115822929..115822945, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:115822929..115822945, + |
Coexpression cluster: | C2515_Fibroblast_mesenchymal_Pericytes_Lymphatic_Smooth_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.60e-21 | 76 |
fat cell | 1.93e-20 | 15 |
preadipocyte | 9.71e-16 | 12 |
skin fibroblast | 9.39e-14 | 23 |
mesenchymal cell | 4.25e-11 | 354 |
connective tissue cell | 1.04e-10 | 361 |
cardiac mesenchymal cell | 2.77e-10 | 4 |
migratory trunk neural crest cell | 2.77e-10 | 4 |
motile cell | 4.14e-10 | 386 |
adipocyte of breast | 1.40e-09 | 2 |
subcutaneous preadipocyte | 2.53e-09 | 2 |
mesenchymal stem cell of adipose | 7.71e-09 | 8 |
multi fate stem cell | 2.36e-08 | 427 |
somatic stem cell | 4.11e-08 | 433 |
stem cell | 8.42e-08 | 441 |
fibrocyte | 9.10e-07 | 3 |
tendon cell | 9.10e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.67e-18 | 14 |
integument | 2.26e-17 | 46 |
integumental system | 2.26e-17 | 46 |
hypodermis | 9.37e-14 | 5 |
skin of body | 2.11e-10 | 41 |
connective tissue | 3.50e-10 | 371 |
surface structure | 1.69e-09 | 99 |
perirenal fat | 4.53e-09 | 2 |
dense regular connective tissue | 9.10e-07 | 3 |
tendon | 9.10e-07 | 3 |
regular connective tissue | 9.10e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.01e-14 | 5 |
myotonic disease | 3.01e-14 | 5 |
muscle tissue disease | 3.01e-14 | 5 |
myopathy | 3.01e-14 | 5 |
muscular disease | 3.01e-14 | 5 |
myotonic dystrophy | 3.01e-14 | 5 |