FFCP PHASE1:Hg19::chr1:1289800..1289816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=54587 | |EntrezGene=entrezgene:54587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7542 | |HGNC=HGNC:7542 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_ENST00000473097_5end | |association_with_transcript=37bp_to_ENST00000473097_5end | ||
|cluster_id=chr1:1289800..1289816,- | |||
|coexpression_cluster_id=C1000 | |coexpression_cluster_id=C1000 | ||
|description=CAGE_peak_11_at_MXRA8_5end | |description=CAGE_peak_11_at_MXRA8_5end | ||
Revision as of 20:32, 27 July 2015
| Short description: | p11@MXRA8 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_11_at_MXRA8_5end |
| Coexpression cluster: | C1000_Osteoblast_Preadipocyte_Hair_Adipocyte_tenocyte_Mesenchymal_leiomyoma |
| Association with transcript: | 37bp_to_ENST00000473097_5end |
| EntrezGene: | 54587 |
| HGNC: | 7542 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p11@MXRA8 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| preadipocyte | 1.12e-19 | 12 |
| fibroblast | 7.50e-13 | 76 |
| fat cell | 1.22e-12 | 15 |
| hair follicle cell | 9.04e-11 | 5 |
| fibrocyte | 1.01e-10 | 3 |
| tendon cell | 1.01e-10 | 3 |
| preadipocyte of the breast | 2.04e-10 | 3 |
| omentum preadipocyte | 5.39e-10 | 3 |
| GAG secreting cell | 3.95e-08 | 9 |
| carbohydrate secreting cell | 3.95e-08 | 9 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| omentum | 1.89e-13 | 6 |
| peritoneum | 1.89e-13 | 6 |
| abdominal cavity | 1.89e-13 | 6 |
| visceral peritoneum | 1.89e-13 | 6 |
| cavity lining | 3.40e-12 | 12 |
| serous membrane | 3.40e-12 | 12 |
| hair follicle | 9.04e-11 | 5 |
| hair follicle placode | 9.04e-11 | 5 |
| dense regular connective tissue | 1.01e-10 | 3 |
| tendon | 1.01e-10 | 3 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| cell type benign neoplasm | 1.01e-10 | 3 |
| leiomyoma | 1.01e-10 | 3 |
| benign neoplasm | 3.95e-08 | 4 |
Showing 1 to 3 of 3 entries
