FFCP PHASE1:Hg19::chr1:160163170..160163181,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:160163170..160163181,+ | |||
|coexpression_cluster_id=C1331 | |||
|description=CAGE_peak_at_chr1:160163170..160163181,+ | |||
|id=chr1:160163170..160163181,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.04e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.58e-45!57;UBERON:0005068!3.58e-45!57;UBERON:0006241!3.58e-45!57;UBERON:0007135!3.58e-45!57;UBERON:0002616!1.37e-39!59;UBERON:0002780!2.65e-39!41;UBERON:0001890!2.65e-39!41;UBERON:0006240!2.65e-39!41;UBERON:0003080!2.74e-38!42;UBERON:0003075!6.68e-34!86;UBERON:0007284!6.68e-34!86;UBERON:0005743!1.81e-33!86;UBERON:0000955!1.20e-32!69;UBERON:0006238!1.20e-32!69;UBERON:0001017!2.39e-32!82;UBERON:0002346!3.71e-32!90;UBERON:0000073!7.94e-30!94;UBERON:0001016!7.94e-30!94;UBERON:0002619!3.96e-29!22;UBERON:0001893!4.52e-29!34;UBERON:0003056!2.93e-28!61;UBERON:0001869!6.96e-27!32;UBERON:0001950!8.29e-27!20;UBERON:0002791!3.90e-26!33;UBERON:0000956!1.75e-25!25;UBERON:0000203!1.75e-25!25;UBERON:0002020!2.66e-25!34;UBERON:0003528!2.66e-25!34;UBERON:0007023!3.26e-24!115;UBERON:0000200!1.57e-20!6;UBERON:0000033!6.26e-20!123;UBERON:0000153!9.23e-19!129;UBERON:0007811!9.23e-19!129;UBERON:0004121!3.03e-17!169;UBERON:0000924!1.03e-16!173;UBERON:0006601!1.03e-16!173;UBERON:0002771!5.41e-16!3;UBERON:0001871!8.22e-16!7;UBERON:0000025!4.85e-13!194;UBERON:0001894!3.23e-12!7;UBERON:0006222!3.23e-12!7;UBERON:0001905!5.94e-12!2;UBERON:0002757!5.94e-12!2;UBERON:0010134!5.94e-12!2;UBERON:0002784!5.94e-12!2;UBERON:0005408!5.94e-12!2;UBERON:0001899!5.94e-12!2;UBERON:0004111!2.15e-10!241;UBERON:0001872!1.75e-09!5;UBERON:0000477!1.21e-08!286;UBERON:0002037!1.84e-08!6;UBERON:0006215!1.84e-08!6;UBERON:0003076!2.07e-08!15;UBERON:0003057!2.07e-08!15;UBERON:0000064!6.23e-08!219;UBERON:0000483!1.53e-07!309;UBERON:0000119!2.07e-07!312;UBERON:0004733!5.65e-07!12;UBERON:0002028!5.65e-07!12;UBERON:0007277!5.65e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.52e-50;2!UBERON:0002757;3.52e-50;2!UBERON:0010134;3.52e-50;2!UBERON:0005408;3.52e-50;2!UBERON:0001899;3.52e-50;2!UBERON:0003296;6.30e-26;4!UBERON:0010133;6.30e-26;4!UBERON:0002784;6.30e-26;4!UBERON:0002037;8.34e-18;6!UBERON:0001894;1.78e-15;7!UBERON:0002680;2.31e-12;9!UBERON:0001895;2.31e-12;9!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;5.49e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.52e-50,2;UBERON:0002757,4.52e-50,2;UBERON:0010134,4.52e-50,2;UBERON:0005408,4.52e-50,2;UBERON:0001899,4.52e-50,2;UBERON:0003296,7.14e-26,4;UBERON:0010133,7.14e-26,4;UBERON:0002784,7.14e-26,4;UBERON:0002037,7.67e-18,6;UBERON:0006215,7.67e-18,6;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7;UBERON:0002680,2.19e-12,9;UBERON:0001895,2.19e-12,9;UBERON:0010092,2.19e-12,9;UBERON:0004733,1.22e-09,12;UBERON:0002028,1.22e-09,12;UBERON:0007277,1.22e-09,12;UBERON:0004732,5.28e-09,13;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003076,5.55e-08,15;UBERON:0003057,5.55e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr1:160163170..160163181,+ | |||
}} |
Latest revision as of 23:17, 27 July 2015
Short description: | p@chr1:160163170..160163181, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160163170..160163181, + |
Coexpression cluster: | C1331_cerebellum_pineal_Neural_medulla_parietal_hippocampus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.52e-50 | 2 |
regional part of epithalamus | 4.52e-50 | 2 |
secretory circumventricular organ | 4.52e-50 | 2 |
circumventricular organ | 4.52e-50 | 2 |
epithalamus | 4.52e-50 | 2 |
gland of diencephalon | 7.14e-26 | 4 |
neuroendocrine gland | 7.14e-26 | 4 |
regional part of diencephalon | 7.14e-26 | 4 |
cerebellum | 7.67e-18 | 6 |
rhombic lip | 7.67e-18 | 6 |
diencephalon | 1.91e-15 | 7 |
future diencephalon | 1.91e-15 | 7 |
regional part of metencephalon | 2.19e-12 | 9 |
metencephalon | 2.19e-12 | 9 |
future metencephalon | 2.19e-12 | 9 |
segmental subdivision of hindbrain | 1.22e-09 | 12 |
hindbrain | 1.22e-09 | 12 |
presumptive hindbrain | 1.22e-09 | 12 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
posterior neural tube | 5.55e-08 | 15 |
chordal neural plate | 5.55e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |