FFCP PHASE1:Hg19::chr1:183203912..183203929,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:183203912..183203929,+ | |||
|description=CAGE_peak_at_chr1:183203912..183203929,+ | |||
|id=chr1:183203912..183203929,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.08e-15!180;CL:0000057!2.83e-12!75;CL:0000222!2.91e-12!119;CL:0000680!2.60e-09!57;CL:0000056!2.60e-09!57;CL:0000355!2.60e-09!57;CL:0000187!4.18e-09!54;CL:0000136!1.66e-08!15;CL:0002620!2.60e-08!23;CL:0000359!3.74e-08!32;CL:0000192!5.23e-08!42;CL:0000514!5.23e-08!42;CL:0000183!5.68e-08!59;CL:0000393!4.42e-07!60;CL:0000211!4.42e-07!60;CL:0000048!8.04e-07!430;CL:0000077!9.05e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.22e-13;32!CL:0000569;1.33e-11;4!CL:0002539;1.28e-09;10!CL:0000192;3.04e-08;43!CL:0000723;4.98e-08;61!CL:0000134;2.83e-07;55!CL:0002596;3.52e-07;2!CL:0000048;3.89e-07;58!CL:0000136;4.64e-07;13!CL:0002593;9.34e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.47e-14,32;CL:0000569,3.69e-12,4;CL:0000011,3.69e-12,4;CL:0000192,5.50e-11,43;CL:0000514,5.50e-11,43;CL:0002539,6.65e-10,10;CL:0000187,5.39e-09,55;CL:0000680,2.44e-08,58;CL:0000056,2.44e-08,58;CL:0000355,2.44e-08,58;CL:0000393,9.46e-08,61;CL:0000211,9.46e-08,61;CL:0000048,1.52e-07,427;CL:0000723,2.89e-07,433;CL:0002596,3.17e-07,2;CL:0000034,6.64e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000011;1.33e-11;4!CL:0000514;3.04e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!5.22e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.66e-14;14!DOID:120;6.19e-10;27!DOID:193;4.33e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.18e-14,14;DOID:120,4.61e-10,27;DOID:193,3.30e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.82e-13!42;UBERON:0003509!3.82e-13!42;UBERON:0004572!3.82e-13!42;UBERON:0000055!1.64e-11!69;UBERON:0004872!2.58e-11!84;UBERON:0004573!4.32e-11!33;UBERON:0004571!4.32e-11!33;UBERON:0001981!3.66e-10!60;UBERON:0007500!3.66e-10!60;UBERON:0004537!3.66e-10!60;UBERON:0006965!3.66e-10!60;UBERON:0002049!1.23e-09!79;UBERON:0007798!1.23e-09!79;UBERON:0002385!1.54e-08!63;UBERON:0001015!1.54e-08!63;UBERON:0000383!1.54e-08!63;UBERON:0001134!1.63e-08!61;UBERON:0002036!1.63e-08!61;UBERON:0003082!1.63e-08!61;UBERON:0001013!1.69e-08!14;UBERON:0004290!1.82e-08!70;UBERON:0000486!2.56e-08!82;UBERON:0003914!2.97e-08!118;UBERON:0004535!4.13e-08!110;UBERON:0001009!7.32e-08!113;UBERON:0000914!4.07e-07!83;UBERON:0002329!4.07e-07!83;UBERON:0003077!4.07e-07!83;UBERON:0003059!4.07e-07!83;UBERON:0007282!4.07e-07!83;UBERON:0009618!4.07e-07!83;UBERON:0007285!4.07e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.53e-14;33!UBERON:0004571;1.53e-14;33!UBERON:0001637;1.06e-09;42!UBERON:0003509;1.06e-09;42!UBERON:0004572;1.06e-09;42!UBERON:0004237;1.28e-09;10!UBERON:0004695;1.28e-09;10!UBERON:0002111;1.28e-09;10!UBERON:0004178;1.28e-09;10!UBERON:0002118;3.01e-09;5!UBERON:0000947;1.63e-07;21!UBERON:0010191;1.63e-07;21!UBERON:0005396;3.52e-07;2!UBERON:0001013;7.01e-07;14!UBERON:0005406;9.34e-07;2!UBERON:0002456;9.34e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,6.98e-16,33;UBERON:0004571,6.98e-16,33;UBERON:0001637,2.60e-13,42;UBERON:0003509,2.60e-13,42;UBERON:0004572,2.60e-13,42;UBERON:0004872,6.87e-11,83;UBERON:0004237,6.65e-10,10;UBERON:0004695,6.65e-10,10;UBERON:0002111,6.65e-10,10;UBERON:0004178,6.65e-10,10;UBERON:0007500,1.34e-09,59;UBERON:0001981,1.34e-09,59;UBERON:0004537,1.34e-09,59;UBERON:0006965,1.34e-09,59;UBERON:0002118,1.62e-09,5;UBERON:0002329,4.00e-09,71;UBERON:0003059,4.00e-09,71;UBERON:0007282,4.00e-09,71;UBERON:0004290,4.00e-09,71;UBERON:0009618,4.00e-09,71;UBERON:0000055,5.31e-09,68;UBERON:0003077,6.18e-09,72;UBERON:0007285,6.18e-09,72;UBERON:0007524,9.42e-09,73;UBERON:0007503,6.54e-08,78;UBERON:0000947,1.17e-07,21;UBERON:0010191,1.17e-07,21;UBERON:0001134,1.44e-07,62;UBERON:0002036,1.44e-07,62;UBERON:0003082,1.44e-07,62;UBERON:0002049,2.62e-07,78;UBERON:0007798,2.62e-07,78;UBERON:0005396,3.17e-07,2;UBERON:0002385,3.21e-07,64;UBERON:0001015,3.21e-07,64;UBERON:0000383,3.21e-07,64;UBERON:0000486,3.55e-07,83;UBERON:0004535,4.90e-07,109;UBERON:0001013,5.07e-07,14;UBERON:0005406,6.79e-07,2 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.12763523276777,1.0007329835313,0.446961094427288,2.61701557230111,0,1.26343974685366,0.261185628199839,0,0,0,0,0,0,1.34465029290355,0,0,1.46379839637152,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0.485168122375632,0.697287110717054,0,0,0.28769239232215,0,0,1.37898272294647,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0.496971951695318,0.633152558322899,6.62045904066094,2.0078563452417,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0.404132016209064,0.490385709340376,0.151357427644931,0,0,1.24864030732128,1.1409436430889,0,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,0,3.64064544775211,0.718618141816238,0.168336113954066,0.250237039743928,0.554128230968366,0,0,0,0.113432183160021,0.717558542755448,0.85422955527427,0.423863802319124,0.600182192168805,0.206105058476878,2.31876486041066,0.37223371266318,1.18143432568886,0.487185025805993,1.26216887122057,0.828449087780694,0.484938170456436,1.06502877754984,0.403008392910561,0.508681776931463,0,0,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0.220587945464788,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.387815147273333,17.8828222925941,0.845302752556,0.26593811658487,1.04007436911366,0.514414748524284,0,0,0.285955987316295,1.62786481617433,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,1.60586089917446,1.26161932027148,0.35142424497814,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0.992431231275107,0.61384789315225,0.561320188866147,2.05022638809122,0,0.64341568457443,1.48418066444991,0.308419387605311,0.355123450626254,1.14978018419333,0,0.348631135379878,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,3.21367859688319,0.096670718292122,0.154048617114644,0.460511024178389,0.137836572484531,1.18162269355101,0.435050081742686,0.255679882248303,0.0890320356467374,0,0,0,0,0,2.20368642781448,0,1.84820148105653,2.12922412126809,1.73986598415015,0.9266210955196,0.715624433709956,0,0.316379424718726,0,0,0.42793898803392,2.22742273548156,2.35484592059769,0.359744915166629,0.274537029736055,0.589062011728432,1.2130948894399,0,1.26377536871694,0.975267478179181,2.43713489631284,1.05650146756755,0,0,1.13008116620243,0,1.32687795048244,0.876901770507525,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0,0.35667105148125,1.41904425628239,0.422215270595328,0.329294892959902,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,1.24415835064723,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0.179515288819544,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80388103297391,0,0.664653872707185,0.661983911750998,0.313932918407225,0,0,1.52542140314453,0,0.195984794828755,0.0870592065804026,0,0.687944129886466,0,0,0,0.193978032976839,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0.67952103036807,0.523014231561666,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0.458320848023367,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0.0524545881349981,0,3.40645944732405,0.191915197319445,0.714695326373367,0,0,1.62899880526114,0,0.653174720218818,0,0,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,2.55336503108073,0.544017803369474,0.5013797880454,1.22538230705385,1.31149052283922,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.941063278792687,0,0,1.94031243752936,0.467426619694449,2.21922344601045,0.189403005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| |||
|short_description=p@chr1:183203912..183203929,+ | |||
}} |
Latest revision as of 01:09, 28 July 2015
Short description: | p@chr1:183203912..183203929, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183203912..183203929, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.47e-14 | 32 |
cardiac mesenchymal cell | 3.69e-12 | 4 |
migratory trunk neural crest cell | 3.69e-12 | 4 |
smooth muscle cell | 5.50e-11 | 43 |
smooth muscle myoblast | 5.50e-11 | 43 |
aortic smooth muscle cell | 6.65e-10 | 10 |
muscle cell | 5.39e-09 | 55 |
muscle precursor cell | 2.44e-08 | 58 |
myoblast | 2.44e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.44e-08 | 58 |
electrically responsive cell | 9.46e-08 | 61 |
electrically active cell | 9.46e-08 | 61 |
multi fate stem cell | 1.52e-07 | 427 |
somatic stem cell | 2.89e-07 | 433 |
smooth muscle cell of the carotid artery | 3.17e-07 | 2 |
stem cell | 6.64e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.18e-14 | 14 |
female reproductive organ cancer | 4.61e-10 | 27 |
reproductive organ cancer | 3.30e-09 | 29 |