FFCP PHASE1:Hg19::chr1:183209165..183209207,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183209165..183209207,+ | |||
|coexpression_cluster_id=C268 | |||
|description=CAGE_peak_at_chr1:183209165..183209207,+ | |description=CAGE_peak_at_chr1:183209165..183209207,+ | ||
|id=chr1:183209165..183209207,+ | |id=chr1:183209165..183209207,+ | ||
|ontology_enrichment_celltype=CL:0002076!7.32e-22!43;CL:0000066!7.96e-16!254;CL:0000223!2.95e-13!59;CL:0002368!1.49e-12!13;CL:0002321!1.82e-09!248;CL:0000220!2.88e-09!246;CL:0002159!2.58e-08!13;CL:0002251!4.35e-08!21;CL:0002334!6.58e-08!12;CL:0000548!2.47e-07!679;CL:0000004!2.47e-07!679;CL:0000255!2.47e-07!679;CL:0002202!2.61e-07!9;CL:0002632!2.61e-07!9;CL:0000244!2.94e-07!4;CL:0000731!2.94e-07!4;CL:0000622!3.51e-07!5;CL:0000012!3.89e-07!682;CL:0000063!6.12e-07!578 | |ontology_enrichment_celltype=CL:0002076!7.32e-22!43;CL:0000066!7.96e-16!254;CL:0000223!2.95e-13!59;CL:0002368!1.49e-12!13;CL:0002321!1.82e-09!248;CL:0000220!2.88e-09!246;CL:0002159!2.58e-08!13;CL:0002251!4.35e-08!21;CL:0002334!6.58e-08!12;CL:0000548!2.47e-07!679;CL:0000004!2.47e-07!679;CL:0000255!2.47e-07!679;CL:0002202!2.61e-07!9;CL:0002632!2.61e-07!9;CL:0000244!2.94e-07!4;CL:0000731!2.94e-07!4;CL:0000622!3.51e-07!5;CL:0000012!3.89e-07!682;CL:0000063!6.12e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.03e-22;13!CL:0002076;1.78e-18;42!CL:0000244;2.59e-16;4!CL:0000731;2.59e-16;4!CL:0002621;3.47e-12;3!CL:0002328;6.95e-12;3!CL:0002202;1.97e-10;9!CL:0002632;1.97e-10;9!CL:0002159;1.18e-09;14!CL:0000317;7.63e-09;2!CL:1000448;7.63e-09;2!CL:0002308;7.63e-09;2!CL:0002140;7.63e-09;2!CL:0002536;1.54e-08;2!CL:0002596;2.24e-08;2!CL:0000622;2.37e-07;5!CL:0000362;4.15e-07;9!CL:0002334;4.20e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,7.71e-23,13;CL:0002076,3.42e-22,42;CL:0000244,2.92e-16,4;CL:0000731,2.92e-16,4;CL:0000223,6.60e-15,58;CL:0002621,2.67e-12,3;CL:0002328,4.89e-12,3;CL:0002202,1.63e-10,9;CL:0002632,1.63e-10,9;CL:0000066,4.17e-10,253;CL:0002159,1.25e-09,14;CL:0000317,9.81e-09,2;CL:1000448,9.81e-09,2;CL:0002308,9.81e-09,2;CL:0002140,9.81e-09,2;CL:0002536,1.61e-08,2;CL:0002596,2.01e-08,2;CL:0000622,3.47e-07,5;CL:0002334,4.33e-07,12;CL:0000362,4.58e-07,9;CL:0002321,6.21e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000223;3.80e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!4.40e-12!57;UBERON:0005910!1.72e-08!6;UBERON:0003688!5.42e-08!6;UBERON:0002358!5.42e-08!6;UBERON:0003684!5.42e-08!6;UBERON:0001178!5.42e-08!6;UBERON:0000365!5.98e-08!5;UBERON:0001004!3.86e-07!72;UBERON:0000464!6.53e-07!104 | |ontology_enrichment_uberon=UBERON:0004923!4.40e-12!57;UBERON:0005910!1.72e-08!6;UBERON:0003688!5.42e-08!6;UBERON:0002358!5.42e-08!6;UBERON:0003684!5.42e-08!6;UBERON:0001178!5.42e-08!6;UBERON:0000365!5.98e-08!5;UBERON:0001004!3.86e-07!72;UBERON:0000464!6.53e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.69e-15;12!UBERON:0000365;4.65e-13;5!UBERON:0001949;3.47e-12;3!UBERON:0004815;6.95e-12;3!UBERON:0002031;6.95e-12;3!UBERON:0005910;6.95e-11;6!UBERON:0002419;7.63e-09;2!UBERON:0007771;7.63e-09;2!UBERON:0003297;7.63e-09;2!UBERON:0001821;7.63e-09;2!UBERON:0003487;7.63e-09;2!UBERON:0001820;7.63e-09;2!UBERON:0005911;8.13e-09;36!UBERON:0005396;2.24e-08;2!UBERON:0002185;2.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.11e-13,5;UBERON:0001949,2.67e-12,3;UBERON:0004815,4.89e-12,3;UBERON:0002031,4.89e-12,3;UBERON:0005910,7.51e-11,6;UBERON:0002419,9.81e-09,2;UBERON:0007771,9.81e-09,2;UBERON:0003297,9.81e-09,2;UBERON:0001821,9.81e-09,2;UBERON:0003487,9.81e-09,2;UBERON:0001820,9.81e-09,2;UBERON:0005089,9.81e-09,2;UBERON:0005088,9.81e-09,2;UBERON:0005396,2.01e-08,2;UBERON:0002185,2.20e-07,5;UBERON:0001004,5.25e-07,74;UBERON:0000485,5.63e-07,9;UBERON:0004119,5.91e-07,160;UBERON:0000925,5.91e-07,160;UBERON:0006595,5.91e-07,160 | |||
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| ||
|short_description=p@chr1:183209165..183209207,+ | |short_description=p@chr1:183209165..183209207,+ | ||
}} | }} |
Latest revision as of 01:10, 28 July 2015
Short description: | p@chr1:183209165..183209207, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183209165..183209207, + |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 7.71e-23 | 13 |
endo-epithelial cell | 3.42e-22 | 42 |
transitional epithelial cell | 2.92e-16 | 4 |
urothelial cell | 2.92e-16 | 4 |
endodermal cell | 6.60e-15 | 58 |
gingival epithelial cell | 2.67e-12 | 3 |
bronchial epithelial cell | 4.89e-12 | 3 |
epithelial cell of tracheobronchial tree | 1.63e-10 | 9 |
epithelial cell of lower respiratory tract | 1.63e-10 | 9 |
epithelial cell | 4.17e-10 | 253 |
general ecto-epithelial cell | 1.25e-09 | 14 |
sebum secreting cell | 9.81e-09 | 2 |
epithelial cell of sweat gland | 9.81e-09 | 2 |
epithelial cell of skin gland | 9.81e-09 | 2 |
acinar cell of sebaceous gland | 9.81e-09 | 2 |
amniotic epithelial cell | 1.61e-08 | 2 |
smooth muscle cell of the carotid artery | 2.01e-08 | 2 |
acinar cell | 3.47e-07 | 5 |
preadipocyte | 4.33e-07 | 12 |
epidermal cell | 4.58e-07 | 9 |
embryonic cell | 6.21e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
urothelium | 5.11e-13 | 5 |
gingival epithelium | 2.67e-12 | 3 |
lower respiratory tract epithelium | 4.89e-12 | 3 |
epithelium of bronchus | 4.89e-12 | 3 |
transitional epithelium | 7.51e-11 | 6 |
skin gland | 9.81e-09 | 2 |
epidermis gland | 9.81e-09 | 2 |
gland of integumental system | 9.81e-09 | 2 |
sebaceous gland | 9.81e-09 | 2 |
skin sebaceous gland | 9.81e-09 | 2 |
sweat gland | 9.81e-09 | 2 |
sweat gland placode | 9.81e-09 | 2 |
sebaceous gland placode | 9.81e-09 | 2 |
carotid artery segment | 2.01e-08 | 2 |
bronchus | 2.20e-07 | 5 |
respiratory system | 5.25e-07 | 74 |
simple columnar epithelium | 5.63e-07 | 9 |
endoderm-derived structure | 5.91e-07 | 160 |
endoderm | 5.91e-07 | 160 |
presumptive endoderm | 5.91e-07 | 160 |