FFCP PHASE1:Hg19::chr1:183213092..183213099,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183213092..183213099,+ | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_at_chr1:183213092..183213099,+ | |description=CAGE_peak_at_chr1:183213092..183213099,+ | ||
|id=chr1:183213092..183213099,+ | |id=chr1:183213092..183213099,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.51e-27!43;CL:0000223!5.37e-19!59;CL:0002368!2.17e-17!13;CL:0002159!5.51e-17!13;CL:0000066!6.13e-15!254;CL:0002621!9.62e-15!3;CL:0002251!1.25e-12!21;CL:0000244!1.23e-11!4;CL:0000731!1.23e-11!4;CL:0000317!1.14e-10!2;CL:1000448!1.14e-10!2;CL:0002308!1.14e-10!2;CL:0002140!1.14e-10!2;CL:0000362!2.06e-09!8;CL:0000622!5.38e-09!5;CL:0000154!1.45e-07!6;CL:0002166!1.62e-07!3;CL:0002231!2.22e-07!3;CL:0000240!3.09e-07!6;CL:0000311!3.09e-07!6;CL:0000079!3.09e-07!6;CL:0000237!3.09e-07!6;CL:0000036!3.09e-07!6;CL:0000357!3.09e-07!6;CL:0000114!3.09e-07!6 | |ontology_enrichment_celltype=CL:0002076!1.51e-27!43;CL:0000223!5.37e-19!59;CL:0002368!2.17e-17!13;CL:0002159!5.51e-17!13;CL:0000066!6.13e-15!254;CL:0002621!9.62e-15!3;CL:0002251!1.25e-12!21;CL:0000244!1.23e-11!4;CL:0000731!1.23e-11!4;CL:0000317!1.14e-10!2;CL:1000448!1.14e-10!2;CL:0002308!1.14e-10!2;CL:0002140!1.14e-10!2;CL:0000362!2.06e-09!8;CL:0000622!5.38e-09!5;CL:0000154!1.45e-07!6;CL:0002166!1.62e-07!3;CL:0002231!2.22e-07!3;CL:0000240!3.09e-07!6;CL:0000311!3.09e-07!6;CL:0000079!3.09e-07!6;CL:0000237!3.09e-07!6;CL:0000036!3.09e-07!6;CL:0000357!3.09e-07!6;CL:0000114!3.09e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000244;4.21e-29;4!CL:0000731;4.21e-29;4!CL:0002368;2.47e-20;13!CL:0002076;1.30e-12;42!CL:0002166;9.43e-11;3!CL:0002621;9.43e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.74e-29,4;CL:0000731,2.74e-29,4;CL:0002368,3.21e-20,13;CL:0002076,2.82e-11,42;CL:0002621,8.17e-11,3;CL:0002166,9.90e-11,3;CL:0000223,2.72e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!2.30e-15!5;UBERON:0001949!9.62e-15!3;UBERON:0005910!8.02e-13!6;UBERON:0002419!1.14e-10!2;UBERON:0007771!1.14e-10!2;UBERON:0003297!1.14e-10!2;UBERON:0001821!1.14e-10!2;UBERON:0003487!1.14e-10!2;UBERON:0001820!1.14e-10!2;UBERON:0005089!1.14e-10!2;UBERON:0005088!1.14e-10!2;UBERON:0004119!3.17e-10!169;UBERON:0000925!3.17e-10!169;UBERON:0006595!3.17e-10!169;UBERON:0000161!3.76e-07!35;UBERON:0001004!6.01e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.61e-23;5!UBERON:0000486;7.56e-22;12!UBERON:0005910;8.62e-20;6!UBERON:0001949;9.43e-11;3!UBERON:0001708;2.18e-08;4!UBERON:0008895;2.18e-08;4!UBERON:0011159;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.14e-23,5;UBERON:0005910,6.48e-20,6;UBERON:0001949,8.17e-11,3;UBERON:0001708,2.26e-08,4;UBERON:0008895,2.26e-08,4;UBERON:0011159,6.04e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.671928512795438,1.27597587518148,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.644566922551274,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,0.495854746082934,1.15314040419064,2.80747967488085,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0.43050537267123,0,1.33029046061003,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.671928512795438,1.27597587518148,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.644566922551274,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,0.495854746082934,1.15314040419064,2.80747967488085,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0.43050537267123,0,1.33029046061003,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:183213092..183213099,+ | |short_description=p@chr1:183213092..183213099,+ | ||
}} | }} |
Latest revision as of 01:11, 28 July 2015
Short description: | p@chr1:183213092..183213099, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183213092..183213099, + |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.74e-29 | 4 |
urothelial cell | 2.74e-29 | 4 |
respiratory epithelial cell | 3.21e-20 | 13 |
endo-epithelial cell | 2.82e-11 | 42 |
gingival epithelial cell | 8.17e-11 | 3 |
epithelial cell of Malassez | 9.90e-11 | 3 |
endodermal cell | 2.72e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.14e-23 | 5 |
transitional epithelium | 6.48e-20 | 6 |
gingival epithelium | 8.17e-11 | 3 |
jaw skeleton | 2.26e-08 | 4 |
splanchnocranium | 2.26e-08 | 4 |
primary subdivision of cranial skeletal system | 6.04e-07 | 5 |