FFCP PHASE1:Hg19::chr1:198636234..198636246,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_ENST00000413577_5end | |association_with_transcript=-44bp_to_ENST00000413577_5end | ||
|cluster_id=chr1:198636234..198636246,- | |||
|coexpression_cluster_id=C3918 | |||
|description=CAGE_peak_2_at_ENST00000413577_5end | |description=CAGE_peak_2_at_ENST00000413577_5end | ||
|id=chr1:198636234..198636246,- | |id=chr1:198636234..198636246,- | ||
|ontology_enrichment_celltype=CL:0002620!7.84e-61!23;CL:0000057!9.85e-29!75;CL:0000055!5.87e-16!180;CL:0002580!6.95e-11!3;CL:0002579!1.03e-10!3;CL:0002334!4.89e-10!12 | |ontology_enrichment_celltype=CL:0002620!7.84e-61!23;CL:0000057!9.85e-29!75;CL:0000055!5.87e-16!180;CL:0002580!6.95e-11!3;CL:0002579!1.03e-10!3;CL:0002334!4.89e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.17e-59;23!CL:0000057;8.12e-12;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.75e-59,23;CL:0000057,3.82e-24,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!7.33e-37!5;DOID:450!7.33e-37!5;DOID:66!7.33e-37!5;DOID:423!7.33e-37!5;DOID:0080000!7.33e-37!5;DOID:11722!7.33e-37!5;DOID:3371!5.28e-09!1;DOID:4549!5.28e-09!1;DOID:5861!5.28e-09!1;DOID:6496!5.28e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:17;1.96e-21;5!DOID:450;1.96e-21;5!DOID:66;1.96e-21;5!DOID:423;1.96e-21;5!DOID:0080000;1.96e-21;5!DOID:11722;1.96e-21;5!DOID:3371;6.05e-13;1!DOID:4549;6.05e-13;1!DOID:5861;6.05e-13;1!DOID:6496;6.05e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.96e-21,5;DOID:450,1.96e-21,5;DOID:66,1.96e-21,5;DOID:423,1.96e-21,5;DOID:0080000,1.96e-21,5;DOID:11722,1.96e-21,5;DOID:3371,3.76e-13,1;DOID:4549,3.76e-13,1;DOID:5861,3.76e-13,1;DOID:6496,3.76e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!6.52e-34!40;UBERON:0002199!7.35e-30!45;UBERON:0002416!7.35e-30!45;UBERON:0003102!8.87e-13!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.14e-23;41!UBERON:0002199;2.04e-20;46!UBERON:0002416;2.04e-20;46!UBERON:0003102;1.43e-14;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,7.79e-33,41;UBERON:0002199,3.98e-29,46;UBERON:0002416,3.98e-29,46;UBERON:0003102,8.56e-13,99 | |||
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|short_description=p2@ENST00000413577 | |short_description=p2@ENST00000413577 | ||
}} | }} |
Latest revision as of 01:56, 28 July 2015
Short description: | p2@ENST00000413577 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000413577_5end |
Coexpression cluster: | C3918_glioblastoma_Fibroblast_Preadipocyte_liposarcoma_mesodermal_extraskeletal_osteoclastoma |
Association with transcript: | -44bp_to_ENST00000413577_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.75e-59 | 23 |
fibroblast | 3.82e-24 | 76 |
Ontology term | p-value | n |
---|---|---|
skin of body | 7.79e-33 | 41 |
integument | 3.98e-29 | 46 |
integumental system | 3.98e-29 | 46 |
surface structure | 8.56e-13 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.96e-21 | 5 |
myotonic disease | 1.96e-21 | 5 |
muscle tissue disease | 1.96e-21 | 5 |
myopathy | 1.96e-21 | 5 |
muscular disease | 1.96e-21 | 5 |
myotonic dystrophy | 1.96e-21 | 5 |
chondrosarcoma | 3.76e-13 | 1 |
extraosseous chondrosarcoma | 3.76e-13 | 1 |
myxoid chondrosarcoma | 3.76e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 3.76e-13 | 1 |