FFCP PHASE1:Hg19::chr1:200379777..200379783,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:200379777..200379783,- | |||
|coexpression_cluster_id=C1842 | |coexpression_cluster_id=C1842 | ||
|description=CAGE_peak_at_chr1:200379777..200379783,- | |description=CAGE_peak_at_chr1:200379777..200379783,- | ||
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|ontology_enrichment_celltype=CL:0000057!8.54e-13!75;CL:0000055!1.93e-09!180;CL:0002620!3.94e-09!23;CL:0002334!5.37e-09!12 | |ontology_enrichment_celltype=CL:0000057!8.54e-13!75;CL:0000055!1.93e-09!180;CL:0002620!3.94e-09!23;CL:0002334!5.37e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0002580;1.27e-14;3!CL:0000135;2.88e-13;3!CL:0000388;2.88e-13;3!CL:0002579;5.41e-13;3!CL:0002334;1.35e-12;12!CL:0002620;8.78e-11;23!CL:0002570;1.32e-08;8!CL:0000153;1.24e-07;9!CL:0000447;1.24e-07;9!CL:0000214;9.19e-07;3 | |ontology_enrichment_celltype_v019=CL:0002580;1.27e-14;3!CL:0000135;2.88e-13;3!CL:0000388;2.88e-13;3!CL:0002579;5.41e-13;3!CL:0002334;1.35e-12;12!CL:0002620;8.78e-11;23!CL:0002570;1.32e-08;8!CL:0000153;1.24e-07;9!CL:0000447;1.24e-07;9!CL:0000214;9.19e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.24e-14,3;CL:0000057,5.99e-14,76;CL:0000135,1.70e-13,3;CL:0000388,1.70e-13,3;CL:0002579,7.11e-13,3;CL:0002334,1.53e-12,12;CL:0002620,1.05e-10,23;CL:0002570,1.03e-08,8;CL:0000153,1.48e-07,9;CL:0000447,1.48e-07,9;CL:0000214,8.21e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.88e-13;3!UBERON:0000043;2.88e-13;3!UBERON:0007845;2.88e-13;3!UBERON:0004457;1.47e-11;9!UBERON:0000042;1.47e-11;9!UBERON:0001013;2.22e-10;14!UBERON:0006915;9.19e-07;3!UBERON:0007616;9.19e-07;3!UBERON:0002217;9.19e-07;3!UBERON:0002018;9.19e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0007846;2.88e-13;3!UBERON:0000043;2.88e-13;3!UBERON:0007845;2.88e-13;3!UBERON:0004457;1.47e-11;9!UBERON:0000042;1.47e-11;9!UBERON:0001013;2.22e-10;14!UBERON:0006915;9.19e-07;3!UBERON:0007616;9.19e-07;3!UBERON:0002217;9.19e-07;3!UBERON:0002018;9.19e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.70e-13,3;UBERON:0000043,1.70e-13,3;UBERON:0007845,1.70e-13,3;UBERON:0001013,1.63e-10,14;UBERON:0004457,1.40e-08,12;UBERON:0000042,1.40e-08,12;UBERON:0002384,7.71e-07,371;UBERON:0006915,8.21e-07,3;UBERON:0007616,8.21e-07,3;UBERON:0002217,8.21e-07,3;UBERON:0002018,8.21e-07,3 | |||
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| ||
|short_description=p@chr1:200379777..200379783,- | |short_description=p@chr1:200379777..200379783,- | ||
}} | }} |
Latest revision as of 02:01, 28 July 2015
Short description: | p@chr1:200379777..200379783, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:200379777..200379783, - |
Coexpression cluster: | C1842_Preadipocyte_epithelioid_Synoviocyte_tenocyte_renal_Fibroblast_spindle |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.24e-14 | 3 |
fibroblast | 5.99e-14 | 76 |
fibrocyte | 1.70e-13 | 3 |
tendon cell | 1.70e-13 | 3 |
omentum preadipocyte | 7.11e-13 | 3 |
preadipocyte | 1.53e-12 | 12 |
skin fibroblast | 1.05e-10 | 23 |
mesenchymal stem cell of adipose | 1.03e-08 | 8 |
GAG secreting cell | 1.48e-07 | 9 |
carbohydrate secreting cell | 1.48e-07 | 9 |
synovial cell | 8.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.70e-13 | 3 |
tendon | 1.70e-13 | 3 |
regular connective tissue | 1.70e-13 | 3 |
adipose tissue | 1.63e-10 | 14 |
cavity lining | 1.40e-08 | 12 |
serous membrane | 1.40e-08 | 12 |
connective tissue | 7.71e-07 | 371 |
stratified squamous epithelium | 8.21e-07 | 3 |
layer of synovial tissue | 8.21e-07 | 3 |
synovial joint | 8.21e-07 | 3 |
synovial membrane of synovial joint | 8.21e-07 | 3 |