FFCP PHASE1:Hg19::chr1:203052309..203052311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:203052309..203052311,- | |||
|coexpression_cluster_id=C480 | |coexpression_cluster_id=C480 | ||
|description=CAGE_peak_at_chr1:203052309..203052311,- | |description=CAGE_peak_at_chr1:203052309..203052311,- | ||
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|ontology_enrichment_celltype=CL:0000188!4.27e-52!9;CL:0000594!2.89e-22!3;CL:0002575!4.00e-16!2;CL:0000183!4.60e-11!59;CL:0000680!3.22e-09!57;CL:0000056!3.22e-09!57;CL:0000355!3.22e-09!57;CL:0000187!8.54e-08!54;CL:0000669!5.73e-07!5;CL:0000393!6.61e-07!60;CL:0000211!6.61e-07!60 | |ontology_enrichment_celltype=CL:0000188!4.27e-52!9;CL:0000594!2.89e-22!3;CL:0002575!4.00e-16!2;CL:0000183!4.60e-11!59;CL:0000680!3.22e-09!57;CL:0000056!3.22e-09!57;CL:0000355!3.22e-09!57;CL:0000187!8.54e-08!54;CL:0000669!5.73e-07!5;CL:0000393!6.61e-07!60;CL:0000211!6.61e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000188;2.94e-39;9!CL:0002575;1.48e-12;2!CL:0000669;6.50e-07;4 | |ontology_enrichment_celltype_v019=CL:0000188;2.94e-39;9!CL:0002575;1.48e-12;2!CL:0000669;6.50e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.42e-39,9;CL:0002575,1.48e-12,2;CL:0000669,6.50e-07,4;CL:0000187,8.59e-07,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;3.44e-49;16!UBERON:0002036;3.44e-49;16!UBERON:0002385;8.66e-25;31!UBERON:0001015;8.66e-25;31!UBERON:0000383;8.66e-25;31!UBERON:0002426;3.67e-23;1!UBERON:0003831;3.67e-23;1!UBERON:0003898;3.67e-23;1!UBERON:0004830;3.67e-23;1!UBERON:0003830;3.67e-23;1!UBERON:0005175;3.67e-23;1!UBERON:0001774;3.67e-23;1!UBERON:0001103;3.67e-23;1!UBERON:0005090;2.74e-12;2!UBERON:0001630;2.74e-12;2!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0002204;7.75e-08;70 | |ontology_enrichment_uberon_v019=UBERON:0001134;3.44e-49;16!UBERON:0002036;3.44e-49;16!UBERON:0002385;8.66e-25;31!UBERON:0001015;8.66e-25;31!UBERON:0000383;8.66e-25;31!UBERON:0002426;3.67e-23;1!UBERON:0003831;3.67e-23;1!UBERON:0003898;3.67e-23;1!UBERON:0004830;3.67e-23;1!UBERON:0003830;3.67e-23;1!UBERON:0005175;3.67e-23;1!UBERON:0001774;3.67e-23;1!UBERON:0001103;3.67e-23;1!UBERON:0005090;2.74e-12;2!UBERON:0001630;2.74e-12;2!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0002204;7.75e-08;70 | ||
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|short_description=p@chr1:203052309..203052311,- | |short_description=p@chr1:203052309..203052311,- | ||
}} | }} |
Latest revision as of 02:22, 28 July 2015
Short description: | p@chr1:203052309..203052311, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203052309..203052311, - |
Coexpression cluster: | C480_Pericytes_Skeletal_skeletal_mesenchymal_Hepatic_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.42e-39 | 9 |
central nervous system pericyte | 1.48e-12 | 2 |
pericyte cell | 6.50e-07 | 4 |
muscle cell | 8.59e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 4.10e-23 | 1 |
respiratory system muscle | 4.10e-23 | 1 |
skeletal muscle of trunk | 4.10e-23 | 1 |
respiratory system skeletal muscle | 4.10e-23 | 1 |
thoracic segment muscle | 4.10e-23 | 1 |
chest organ | 4.10e-23 | 1 |
muscle of trunk | 4.10e-23 | 1 |
diaphragm | 4.10e-23 | 1 |
future diaphragm | 4.10e-23 | 1 |
skeletal muscle tissue | 8.10e-13 | 62 |
striated muscle tissue | 8.10e-13 | 62 |
myotome | 8.10e-13 | 62 |
muscle tissue | 2.03e-12 | 64 |
musculature | 2.03e-12 | 64 |
musculature of body | 2.03e-12 | 64 |
muscle structure | 2.90e-12 | 2 |
muscle organ | 2.90e-12 | 2 |
somite | 3.41e-11 | 71 |
presomitic mesoderm | 3.41e-11 | 71 |
presumptive segmental plate | 3.41e-11 | 71 |
dermomyotome | 3.41e-11 | 71 |
trunk paraxial mesoderm | 3.41e-11 | 71 |
paraxial mesoderm | 4.88e-11 | 72 |
presumptive paraxial mesoderm | 4.88e-11 | 72 |
dense mesenchyme tissue | 6.91e-11 | 73 |
epithelial vesicle | 3.46e-10 | 78 |
multilaminar epithelium | 1.43e-09 | 83 |
trunk mesenchyme | 1.06e-08 | 122 |
tongue | 1.21e-08 | 3 |
gustatory system | 1.21e-08 | 3 |
future tongue | 1.21e-08 | 3 |
unilaminar epithelium | 3.94e-07 | 148 |